Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06695

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,492,858	+				-2.0
1,492,859	-				+0.0
1,492,892	+				+0.0
1,492,892	+				-0.5
1,492,900	+				-0.5
1,492,902	+				-0.5
1,492,902	+				-0.7
1,492,902	+				+2.7
1,492,903	-				-0.7
1,492,903	-				+1.2
1,493,010	+				+0.3
1,493,010	+				-1.5
1,493,010	+				-2.2
1,493,011	-				-2.3
1,493,011	-				-1.3
1,493,011	-				-1.0
1,493,047	+				-0.7
1,493,048	-				-0.9
1,493,063	-				+0.5
1,493,063	-				-0.6
1,493,063	-				-2.2
1,493,122	+		DDA3937_RS06690	0.11	+0.8
1,493,122	+		DDA3937_RS06690	0.11	-0.2
1,493,122	+		DDA3937_RS06690	0.11	-1.0
1,493,198	+		DDA3937_RS06690	0.22	+0.3
1,493,198	+		DDA3937_RS06690	0.22	-2.5
1,493,198	+		DDA3937_RS06690	0.22	-0.3
1,493,198	+		DDA3937_RS06690	0.22	+0.1
1,493,198	+		DDA3937_RS06690	0.22	+1.7
1,493,199	-		DDA3937_RS06690	0.23	-0.6
1,493,199	-		DDA3937_RS06690	0.23	-0.3
1,493,199	-		DDA3937_RS06690	0.23	-1.5
1,493,199	-		DDA3937_RS06690	0.23	+0.3
1,493,201	+		DDA3937_RS06690	0.23	+0.8
1,493,201	+		DDA3937_RS06690	0.23	-0.3
1,493,201	+		DDA3937_RS06690	0.23	-1.1
1,493,201	+		DDA3937_RS06690	0.23	-0.4
1,493,201	+		DDA3937_RS06690	0.23	-1.9
1,493,201	+		DDA3937_RS06690	0.23	-2.4
1,493,202	-		DDA3937_RS06690	0.23	-1.0
1,493,249	+		DDA3937_RS06690	0.30	-0.2
1,493,249	+		DDA3937_RS06690	0.30	+0.1
1,493,250	-		DDA3937_RS06690	0.31	-0.4
1,493,250	-		DDA3937_RS06690	0.31	-0.2
1,493,250	-		DDA3937_RS06690	0.31	-1.2
1,493,342	+		DDA3937_RS06690	0.45	-1.2
1,493,342	+		DDA3937_RS06690	0.45	-1.3
1,493,342	+		DDA3937_RS06690	0.45	+0.8
1,493,342	+		DDA3937_RS06690	0.45	-1.7
1,493,342	+		DDA3937_RS06690	0.45	+1.5
1,493,342	+		DDA3937_RS06690	0.45	+0.8
1,493,343	-		DDA3937_RS06690	0.45	-0.9
1,493,343	-		DDA3937_RS06690	0.45	-0.8
1,493,343	-		DDA3937_RS06690	0.45	-0.8
1,493,343	-		DDA3937_RS06690	0.45	-0.0
1,493,343	-				-0.7
1,493,343	-		DDA3937_RS06690	0.45	+0.3
1,493,343	-		DDA3937_RS06690	0.45	-0.3
1,493,555	+		DDA3937_RS06690	0.78	+0.3
1,493,555	+		DDA3937_RS06690	0.78	+0.4
1,493,555	+		DDA3937_RS06690	0.78	+0.2
1,493,555	+		DDA3937_RS06690	0.78	-0.6
1,493,555	+		DDA3937_RS06690	0.78	-2.5
1,493,555	+		DDA3937_RS06690	0.78	+2.3
1,493,555	+		DDA3937_RS06690	0.78	-1.3
1,493,556	-		DDA3937_RS06690	0.78	+0.2
1,493,556	-		DDA3937_RS06690	0.78	-0.5
1,493,556	-		DDA3937_RS06690	0.78	+0.8
1,493,556	-		DDA3937_RS06690	0.78	-1.2
1,493,556	-		DDA3937_RS06690	0.78	-1.7
1,493,609	+		DDA3937_RS06690	0.86	-0.8
1,493,609	+		DDA3937_RS06690	0.86	-0.4
1,493,610	-		DDA3937_RS06690	0.87	+0.1
1,493,660	-				-0.5
1,493,694	-				-0.2
1,493,700	+				+0.6
1,493,721	+				+0.5
1,493,721	+				-0.7
1,493,722	-				+1.1
1,493,722	-				-1.3
1,493,722	-				-1.0
1,493,740	-				-2.3
1,493,740	-				+0.4
1,493,740	-				-2.7
1,494,099	+		DDA3937_RS06695	0.52	-0.5
1,494,215	-		DDA3937_RS06695	0.72	-1.0
1,494,253	-		DDA3937_RS06695	0.78	-0.5
1,494,253	-		DDA3937_RS06695	0.78	-0.5
1,494,307	+		DDA3937_RS06695	0.88	+0.1
1,494,308	-		DDA3937_RS06695	0.88	-2.1
1,494,308	-		DDA3937_RS06695	0.88	-1.3
1,494,308	-		DDA3937_RS06695	0.88	-0.8
1,494,308	-		DDA3937_RS06695	0.88	-0.7
1,494,308	-		DDA3937_RS06695	0.88	-1.5
1,494,309	+		DDA3937_RS06695	0.88	-0.4
1,494,331	+				+0.8
1,494,331	+				-0.6
1,494,332	-				-0.2
1,494,376	+				-0.4
1,494,449	-				+0.8
1,494,510	+				-1.5
1,494,510	+				-1.8
1,494,510	+				+0.0
1,494,510	+				+0.0
1,494,511	-				-2.6
1,494,511	-				-2.3
1,494,511	-				+0.1
1,494,512	+				-2.0
1,494,512	+				-0.5
1,494,512	+				-1.2
1,494,512	+				-0.2
1,494,513	-				-0.9
1,494,513	-				-2.2
1,494,513	-				-1.2
1,495,038	+		DDA3937_RS06700	0.35	-0.5
1,495,038	+		DDA3937_RS06700	0.35	-0.9
1,495,039	-		DDA3937_RS06700	0.35	-0.3
1,495,077	+		DDA3937_RS06700	0.37	-2.0
1,495,143	+		DDA3937_RS06700	0.40	-0.1
1,495,196	+		DDA3937_RS06700	0.43	+0.6
1,495,248	+		DDA3937_RS06700	0.46	+0.4
1,495,248	+		DDA3937_RS06700	0.46	+0.4
1,495,248	+		DDA3937_RS06700	0.46	-1.5
1,495,249	-		DDA3937_RS06700	0.46	-0.7
1,495,249	-		DDA3937_RS06700	0.46	+0.6
1,495,249	-		DDA3937_RS06700	0.46	+0.5
1,495,249	-		DDA3937_RS06700	0.46	-0.7
1,495,249	-		DDA3937_RS06700	0.46	+0.5
1,495,249	-		DDA3937_RS06700	0.46	-1.4