Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06650

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,483,026	-		DDA3937_RS06645	0.19	+0.9
1,483,026	-		DDA3937_RS06645	0.19	-0.8
1,483,026	-		DDA3937_RS06645	0.19	+0.9
1,483,327	+		DDA3937_RS06645	0.48	+0.3
1,483,328	-		DDA3937_RS06645	0.48	-0.5
1,483,328	-		DDA3937_RS06645	0.48	+0.5
1,483,328	-		DDA3937_RS06645	0.48	+0.1
1,483,369	+		DDA3937_RS06645	0.52	+1.2
1,483,370	-		DDA3937_RS06645	0.52	+0.4
1,483,395	-		DDA3937_RS06645	0.54	+1.9
1,483,555	+		DDA3937_RS06645	0.69	-0.8
1,483,556	-		DDA3937_RS06645	0.69	-0.5
1,483,737	-		DDA3937_RS06645	0.87	+0.1
1,483,737	-		DDA3937_RS06645	0.87	-0.4
1,483,843	+				-1.0
1,483,843	+				+1.2
1,483,843	+				-0.1
1,483,843	+				+0.1
1,483,843	+				-0.4
1,483,844	-				+0.3
1,483,844	-				+0.5
1,483,854	+				-0.1
1,483,855	-				+3.7
1,483,876	+				+0.1
1,483,876	+				-0.2
1,483,877	-				-1.5
1,483,877	-				-1.1
1,483,877	-				-0.1
1,483,879	+				-0.2
1,483,879	+				-0.6
1,483,919	+				-0.1
1,483,919	+				+0.0
1,483,919	+				-0.7
1,483,920	-				+1.1
1,483,920	-				+0.5
1,483,920	-				-0.5
1,483,974	-				+0.3
1,484,331	+		DDA3937_RS06650	0.50	+0.0
1,484,331	+		DDA3937_RS06650	0.50	+0.2
1,484,331	+		DDA3937_RS06650	0.50	-0.4
1,484,405	-		DDA3937_RS06650	0.59	-1.5
1,484,405	-		DDA3937_RS06650	0.59	+1.2
1,484,425	+		DDA3937_RS06650	0.61	-0.3
1,484,425	+		DDA3937_RS06650	0.61	+0.9
1,484,426	-		DDA3937_RS06650	0.61	-1.4
1,484,426	-		DDA3937_RS06650	0.61	-1.1
1,484,426	-		DDA3937_RS06650	0.61	-1.1
1,484,531	-		DDA3937_RS06650	0.74	-0.5
1,484,531	-		DDA3937_RS06650	0.74	-1.7
1,484,531	-		DDA3937_RS06650	0.74	-2.0
1,484,536	+		DDA3937_RS06650	0.75	-0.5
1,484,536	+		DDA3937_RS06650	0.75	-0.1
1,484,536	+		DDA3937_RS06650	0.75	+0.3
1,484,536	+		DDA3937_RS06650	0.75	+0.4
1,484,537	-		DDA3937_RS06650	0.75	-0.3
1,484,537	-		DDA3937_RS06650	0.75	-0.7
1,484,584	+		DDA3937_RS06650	0.80	-0.7
1,484,667	+				+0.1
1,484,737	+				+0.0
1,484,738	-				-0.7
1,484,747	+				-0.4
1,484,747	+				+0.9
1,484,747	+				+1.4
1,484,747	+				+0.3
1,484,748	-				-0.4
1,484,748	-				+0.2
1,484,748	-				-0.3
1,484,786	+				-0.4
1,484,786	+				-1.3
1,484,786	+				-1.1
1,484,787	-				-0.5
1,484,787	-				-0.1
1,484,787	-				-1.0
1,484,787	-				-0.4
1,484,787	-				-0.9
1,484,882	+				-1.3
1,484,883	-				-1.0
1,484,957	+				-0.3
1,484,957	+				-1.3
1,484,958	-				-1.5
1,485,055	-		DDA3937_RS06655	0.11	-1.3
1,485,092	+		DDA3937_RS06655	0.15	-0.7
1,485,092	+		DDA3937_RS06655	0.15	-0.1
1,485,092	+		DDA3937_RS06655	0.15	-0.5
1,485,092	+		DDA3937_RS06655	0.15	-1.2
1,485,092	+		DDA3937_RS06655	0.15	+0.1
1,485,092	+		DDA3937_RS06655	0.15	-0.7
1,485,093	-		DDA3937_RS06655	0.15	-1.2
1,485,128	+		DDA3937_RS06655	0.19	-0.6
1,485,129	-		DDA3937_RS06655	0.19	-0.4
1,485,133	+		DDA3937_RS06655	0.19	+0.8
1,485,133	+		DDA3937_RS06655	0.19	-0.9
1,485,239	+		DDA3937_RS06655	0.30	+0.8
1,485,239	+		DDA3937_RS06655	0.30	+0.4
1,485,240	-		DDA3937_RS06655	0.30	-1.5
1,485,298	+		DDA3937_RS06655	0.36	-0.7
1,485,298	+		DDA3937_RS06655	0.36	-0.2
1,485,340	+		DDA3937_RS06655	0.40	-0.5
1,485,402	-		DDA3937_RS06655	0.46	+0.4
1,485,512	+		DDA3937_RS06655	0.57	-0.2
1,485,512	+		DDA3937_RS06655	0.57	-0.5
1,485,668	+		DDA3937_RS06655	0.73	-0.2
1,485,668	+		DDA3937_RS06655	0.73	-0.2
1,485,669	-		DDA3937_RS06655	0.73	-1.5
1,485,669	-		DDA3937_RS06655	0.73	-1.0
1,485,669	-		DDA3937_RS06655	0.73	+1.1
1,485,669	-		DDA3937_RS06655	0.73	-1.0
1,485,701	-		DDA3937_RS06655	0.76	-1.3