Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06390

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,428,365	+		DDA3937_RS06385	0.47	-0.5
1,428,365	+		DDA3937_RS06385	0.47	-0.5
1,428,365	+		DDA3937_RS06385	0.47	+0.3
1,428,459	+		DDA3937_RS06385	0.52	+0.2
1,428,459	+		DDA3937_RS06385	0.52	-0.5
1,428,460	-		DDA3937_RS06385	0.52	+0.9
1,428,588	+		DDA3937_RS06385	0.60	-0.2
1,428,589	-		DDA3937_RS06385	0.60	+0.2
1,428,589	-		DDA3937_RS06385	0.60	-1.4
1,428,663	-		DDA3937_RS06385	0.65	-0.1
1,428,682	-		DDA3937_RS06385	0.66	-0.1
1,428,682	-		DDA3937_RS06385	0.66	-0.8
1,428,682	-		DDA3937_RS06385	0.66	-0.7
1,428,685	-		DDA3937_RS06385	0.66	+0.5
1,428,685	-		DDA3937_RS06385	0.66	-0.5
1,428,685	-		DDA3937_RS06385	0.66	+0.6
1,428,685	-		DDA3937_RS06385	0.66	-0.4
1,428,737	+		DDA3937_RS06385	0.69	-3.0
1,428,737	+		DDA3937_RS06385	0.69	+0.1
1,428,737	+		DDA3937_RS06385	0.69	-1.9
1,428,738	-		DDA3937_RS06385	0.69	+1.1
1,428,738	-		DDA3937_RS06385	0.69	+0.2
1,428,738	-		DDA3937_RS06385	0.69	-1.0
1,428,887	+		DDA3937_RS06385	0.78	-0.5
1,428,888	-		DDA3937_RS06385	0.78	-0.9
1,428,888	-		DDA3937_RS06385	0.78	+0.1
1,428,912	-		DDA3937_RS06385	0.79	+0.2
1,428,943	+		DDA3937_RS06385	0.81	+1.1
1,429,079	+		DDA3937_RS06385	0.89	-0.2
1,429,079	+		DDA3937_RS06385	0.89	-0.1
1,429,079	+		DDA3937_RS06385	0.89	-0.5
1,429,079	+		DDA3937_RS06385	0.89	+0.1
1,429,079	+		DDA3937_RS06385	0.89	-1.0
1,429,080	-		DDA3937_RS06385	0.89	-0.8
1,429,080	-		DDA3937_RS06385	0.89	-0.2
1,429,148	-				-0.7
1,429,148	-				-0.1
1,429,213	+				+0.0
1,429,213	+				+0.5
1,429,288	+		DDA3937_RS06390	0.31	-0.3
1,429,289	-		DDA3937_RS06390	0.32	+0.9
1,429,308	+		DDA3937_RS06390	0.53	+0.2
1,429,308	+		DDA3937_RS06390	0.53	-0.1
1,429,308	+		DDA3937_RS06390	0.53	+1.1
1,429,309	-		DDA3937_RS06390	0.54	+0.4
1,429,309	-		DDA3937_RS06390	0.54	-0.1
1,429,309	-		DDA3937_RS06390	0.54	-0.4
1,429,311	+		DDA3937_RS06390	0.57	+0.3
1,429,312	-		DDA3937_RS06390	0.58	-1.6
1,429,320	+		DDA3937_RS06390	0.67	-0.5
1,429,320	+		DDA3937_RS06390	0.67	-0.4
1,429,321	-		DDA3937_RS06390	0.68	+0.5
1,429,321	-		DDA3937_RS06390	0.68	+0.3
1,429,321	-		DDA3937_RS06390	0.68	+0.1
1,429,321	-		DDA3937_RS06390	0.68	+3.2
1,429,323	-		DDA3937_RS06390	0.70	-0.3
1,429,343	+				-2.2
1,429,343	+				-0.4
1,429,461	-				-0.3
1,429,461	-				-1.0
1,429,547	+				-0.3
1,429,547	+				-0.4
1,429,548	-				-1.5
1,429,556	+				-0.4
1,429,556	+				+0.3
1,429,557	-				-0.3
1,429,557	-				+0.9
1,429,585	-				+0.1
1,429,585	-				-0.7
1,429,585	-				-0.6
1,429,585	-				-0.1
1,429,585	-				+0.4
1,429,585	-				+0.5
1,429,585	-				+0.1
1,429,638	+				-0.2
1,429,648	+				+0.9
1,429,649	-				+0.0
1,429,769	+				+0.5
1,429,793	+				-0.3
1,429,793	+				+0.3
1,429,793	+				+1.3
1,429,793	+				-1.8
1,429,793	+				-0.3
1,429,793	+				-0.2
1,429,793	+				+0.3
1,429,793	+				-0.8
1,429,793	+				-0.6
1,429,793	+				-1.7
1,429,793	+				+0.4
1,429,793	+				-0.4
1,429,793	+				+0.1
1,429,793	+				+0.2
1,429,794	-				+0.2
1,429,794	-				-0.5
1,429,794	-				-1.9
1,429,794	-				-1.1
1,429,794	-				-0.2
1,429,794	-				+0.9
1,429,794	-				-0.3
1,429,794	-				-1.3
1,429,794	-				-0.6
1,429,794	-				-0.9
1,429,794	-				+0.5
1,429,794	-				-0.7
1,429,794	-				-0.7
1,429,794	-				-0.5
1,429,794	-				-0.7
1,429,794	-				-0.3
1,429,794	-				+0.1
1,429,794	-				+0.7
1,429,902	-		DDA3937_RS06395	0.57	-0.1
1,429,902	-		DDA3937_RS06395	0.57	-0.2
1,429,907	+		DDA3937_RS06395	0.59	-0.3
1,429,907	+		DDA3937_RS06395	0.59	-0.1
1,429,907	+		DDA3937_RS06395	0.59	-0.5
1,429,907	+		DDA3937_RS06395	0.59	-0.6
1,429,908	-		DDA3937_RS06395	0.60	+0.2
1,429,908	-		DDA3937_RS06395	0.60	-0.5
1,429,908	-		DDA3937_RS06395	0.60	-0.9
1,429,908	-		DDA3937_RS06395	0.60	-1.1
1,429,980	-				-0.5
1,430,079	+				-0.6
1,430,106	+				-0.6
1,430,107	-				+0.1
1,430,196	-				-1.0
1,430,230	+				-0.5
1,430,230	+				-0.7
1,430,231	-				-0.4
1,430,231	-				-0.5
1,430,238	+				+0.5
1,430,238	+				-0.6
1,430,238	+				-1.6
1,430,239	-				-0.5
1,430,239	-				+0.1
1,430,239	-				+0.2
1,430,251	+				+0.2