Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06145

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,379,074	+				-1.1
1,379,075	-				+0.1
1,379,075	-				+1.7
1,379,075	-				-1.3
1,379,075	-				+0.6
1,379,075	-				-0.8
1,379,099	-				+1.2
1,379,103	+				-1.1
1,379,416	-		DDA3937_RS06145	0.41	-2.1
1,379,511	-		DDA3937_RS06145	0.54	-1.2
1,379,548	-		DDA3937_RS06145	0.59	-1.9
1,379,548	-		DDA3937_RS06145	0.59	-1.1
1,379,548	-		DDA3937_RS06145	0.59	-0.7
1,379,548	-		DDA3937_RS06145	0.59	-0.2
1,379,780	+				-1.1
1,379,783	+				+0.2
1,379,783	+				-1.2
1,379,783	+				-2.2
1,379,783	+				+0.6
1,379,798	+				+0.3
1,379,798	+				+1.9
1,379,799	-				-0.3
1,379,799	-				-0.3
1,379,799	-				+0.5
1,379,810	-				-0.3
1,379,819	+				+0.5
1,379,819	+				-1.1
1,379,819	+				+1.9
1,379,819	+				-0.5
1,379,819	+				+1.0
1,379,820	-				-0.4
1,379,820	-				-2.0
1,379,820	-				-1.9
1,379,820	-				+0.9
1,379,827	+				-0.8
1,379,827	+				-0.1
1,379,877	+				-0.9
1,379,877	+				-1.1
1,379,878	-				-0.9
1,379,878	-				+0.1
1,379,880	-				+0.2
1,379,893	+				+0.0
1,379,893	+				-2.5
1,379,894	-				-1.1
1,379,894	-				+0.5
1,379,894	-				-0.1
1,379,930	-				-0.4
1,380,245	-				+0.2
1,380,245	-				-1.1
1,380,282	-				+1.9
1,380,282	-				-1.9
1,380,282	-				-0.1
1,380,282	-				+0.2
1,380,282	-				-0.7
1,380,282	-				+0.9
1,380,282	-				-0.4
1,380,286	-				+1.9
1,380,286	-				+0.7
1,380,286	-				+0.3
1,380,314	-				-0.7
1,380,314	-				-1.9
1,380,334	-				+2.5
1,380,385	+				-0.4
1,380,386	-				+0.3
1,380,386	-				+0.2
1,380,390	+				-0.5
1,380,391	-				-0.7
1,380,391	-				-0.1
1,380,391	-				-2.2
1,380,438	-				-0.2
1,380,546	+		DDA3937_RS06155	0.16	-0.5
1,380,546	+		DDA3937_RS06155	0.16	-0.5
1,380,546	+		DDA3937_RS06155	0.16	+0.5
1,380,546	+		DDA3937_RS06155	0.16	-0.7
1,380,546	+		DDA3937_RS06155	0.16	+0.3
1,380,546	+		DDA3937_RS06155	0.16	+0.3
1,380,546	+		DDA3937_RS06155	0.16	-2.4
1,380,546	+		DDA3937_RS06155	0.16	-1.7
1,380,546	+		DDA3937_RS06155	0.16	-0.4
1,380,546	+		DDA3937_RS06155	0.16	+1.9
1,380,547	-		DDA3937_RS06155	0.16	+0.4
1,380,547	-		DDA3937_RS06155	0.16	-1.7
1,380,547	-		DDA3937_RS06155	0.16	-0.1
1,380,547	-		DDA3937_RS06155	0.16	-0.2
1,380,547	-		DDA3937_RS06155	0.16	-1.0
1,380,591	+		DDA3937_RS06155	0.19	-1.1
1,380,591	+		DDA3937_RS06155	0.19	-0.4
1,380,591	+		DDA3937_RS06155	0.19	-2.6
1,380,591	+		DDA3937_RS06155	0.19	+0.8
1,380,591	+		DDA3937_RS06155	0.19	-1.1
1,380,591	+		DDA3937_RS06155	0.19	-1.1
1,380,591	+		DDA3937_RS06155	0.19	-0.8
1,380,591	+		DDA3937_RS06155	0.19	-0.2
1,380,592	-		DDA3937_RS06155	0.19	+1.3
1,380,592	-		DDA3937_RS06155	0.19	-1.2
1,380,592	-		DDA3937_RS06155	0.19	+0.3
1,380,601	+		DDA3937_RS06155	0.20	-1.1
1,380,684	-				-0.1
1,380,765	-		DDA3937_RS06155	0.34	-0.4
1,380,815	-		DDA3937_RS06155	0.38	-0.7
1,380,815	-		DDA3937_RS06155	0.38	-0.8