Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,252,428	+		DDA3937_RS05610	0.53	-0.1
1,252,545	-		DDA3937_RS05610	0.59	-1.8
1,252,657	+		DDA3937_RS05610	0.64	-0.2
1,252,807	+		DDA3937_RS05610	0.72	+0.1
1,253,186	+				+0.4
1,253,543	-				+1.0
1,253,601	-		DDA3937_RS05615	0.22	-1.2
1,253,774	+		DDA3937_RS05615	0.41	+0.3
1,253,844	-		DDA3937_RS05615	0.48	-0.8
1,254,159	-		DDA3937_RS05615	0.81	-0.9
1,254,353	+				-0.6
1,254,364	+				-0.6
1,254,479	-				+1.8
1,254,533	-				-1.6
1,254,554	-				+0.8
1,254,560	-				+0.4
1,254,569	+				-0.6
1,254,573	-				-0.2
1,254,589	-				+1.4
1,254,591	+				-0.3
1,254,591	+				-0.3
1,254,592	-				+0.8
1,254,592	-				-0.9
1,254,603	-				+0.1
1,254,604	+				-0.3
1,254,615	+				-1.0
1,254,616	-				+0.4
1,254,620	-				+0.5
1,254,655	+				+0.6
1,254,655	+				+0.3
1,254,656	-				-1.0
1,254,666	-				-0.1
1,254,696	+				+2.2
1,254,696	+				-0.3
1,254,711	-				+1.0
1,254,711	-				+1.0
1,254,711	-				+0.2
1,254,711	-				+0.6
1,254,711	-				-0.3
1,254,715	-				+1.6
1,254,715	-				+0.5
1,254,750	-				+0.6
1,254,757	+				-1.2
1,254,773	-				-0.0
1,254,819	+				-0.6
1,254,819	+				-0.4
1,254,819	+				-0.2
1,254,819	+				-0.9
1,254,819	+				-0.5
1,254,820	-				+0.6
1,254,820	-				+1.2
1,254,820	-				-1.3
1,254,823	+				-1.5
1,254,824	-				+0.9
1,254,824	-				+0.4
1,254,824	-				-0.2
1,254,865	-				-0.7
1,254,997	+		DDA3937_RS05620	0.13	-0.6
1,255,117	+		DDA3937_RS05620	0.21	+0.1
1,255,117	+		DDA3937_RS05620	0.21	-0.3
1,255,117	+		DDA3937_RS05620	0.21	-1.0
1,255,135	+		DDA3937_RS05620	0.23	-0.4
1,255,135	+		DDA3937_RS05620	0.23	-0.2
1,255,135	+		DDA3937_RS05620	0.23	+0.5
1,255,136	-		DDA3937_RS05620	0.23	-0.3
1,255,136	-		DDA3937_RS05620	0.23	-0.2
1,255,136	-		DDA3937_RS05620	0.23	-1.6
1,255,136	-		DDA3937_RS05620	0.23	-0.5
1,255,171	+		DDA3937_RS05620	0.25	-0.8
1,255,172	-		DDA3937_RS05620	0.25	-0.5
1,255,324	-		DDA3937_RS05620	0.36	+0.8