Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS04800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,068,067	+		DDA3937_RS04795	0.18	-2.1
1,068,176	+		DDA3937_RS04795	0.27	+0.2
1,068,176	+		DDA3937_RS04795	0.27	-0.9
1,068,217	+		DDA3937_RS04795	0.31	-0.4
1,068,276	+		DDA3937_RS04795	0.36	-1.1
1,068,276	+		DDA3937_RS04795	0.36	-0.7
1,068,277	-		DDA3937_RS04795	0.36	-0.2
1,068,277	-		DDA3937_RS04795	0.36	+1.0
1,068,277	-		DDA3937_RS04795	0.36	+0.1
1,068,350	-		DDA3937_RS04795	0.42	-1.0
1,068,437	+		DDA3937_RS04795	0.50	-0.2
1,068,437	+		DDA3937_RS04795	0.50	-0.6
1,068,437	+		DDA3937_RS04795	0.50	-0.5
1,068,437	+		DDA3937_RS04795	0.50	+0.0
1,068,437	+		DDA3937_RS04795	0.50	-1.6
1,068,438	-		DDA3937_RS04795	0.50	+1.4
1,068,438	-		DDA3937_RS04795	0.50	-0.8
1,068,438	-		DDA3937_RS04795	0.50	+1.0
1,068,555	+		DDA3937_RS04795	0.60	+0.2
1,068,555	+		DDA3937_RS04795	0.60	-0.4
1,068,556	-		DDA3937_RS04795	0.60	+0.8
1,068,556	-		DDA3937_RS04795	0.60	-1.0
1,068,559	+		DDA3937_RS04795	0.60	+0.0
1,068,559	+		DDA3937_RS04795	0.60	-1.0
1,068,560	-		DDA3937_RS04795	0.60	-0.0
1,068,645	-		DDA3937_RS04795	0.67	-0.1
1,068,645	-		DDA3937_RS04795	0.67	+0.4
1,068,709	+		DDA3937_RS04795	0.73	+0.1
1,068,709	+		DDA3937_RS04795	0.73	+0.2
1,068,709	+		DDA3937_RS04795	0.73	-0.3
1,068,710	-		DDA3937_RS04795	0.73	+0.0
1,068,878	-		DDA3937_RS04795	0.87	-1.3
1,068,933	-				+0.8
1,069,004	-				-0.3
1,069,023	+				-1.2
1,069,024	-				-0.0
1,069,024	-				-0.0
1,069,024	-				+1.4
1,069,177	+		DDA3937_RS04800	0.11	+1.5
1,069,177	+		DDA3937_RS04800	0.11	+0.6
1,069,178	-		DDA3937_RS04800	0.11	-0.2
1,069,178	-		DDA3937_RS04800	0.11	-0.5
1,069,178	-		DDA3937_RS04800	0.11	+1.0
1,069,297	+		DDA3937_RS04800	0.19	+0.8
1,069,297	+		DDA3937_RS04800	0.19	-1.3
1,069,297	+		DDA3937_RS04800	0.19	+0.7
1,069,297	+		DDA3937_RS04800	0.19	+0.8
1,069,298	-		DDA3937_RS04800	0.19	+2.1
1,069,298	-		DDA3937_RS04800	0.19	-0.1
1,069,298	-		DDA3937_RS04800	0.19	+0.0
1,069,578	+		DDA3937_RS04800	0.38	+0.5
1,069,600	+		DDA3937_RS04800	0.40	+0.8
1,069,761	-		DDA3937_RS04800	0.51	-1.3
1,069,931	-		DDA3937_RS04800	0.62	-0.6
1,069,935	+		DDA3937_RS04800	0.63	+0.4
1,069,935	+		DDA3937_RS04800	0.63	-0.2
1,069,969	-		DDA3937_RS04800	0.65	-0.3
1,069,969	-		DDA3937_RS04800	0.65	-1.0
1,070,080	+		DDA3937_RS04800	0.72	-0.7
1,070,080	+		DDA3937_RS04800	0.72	+0.2
1,070,080	+		DDA3937_RS04800	0.72	-0.7
1,070,080	+		DDA3937_RS04800	0.72	-0.6
1,070,080	+		DDA3937_RS04800	0.72	-0.7
1,070,080	+		DDA3937_RS04800	0.72	+0.5
1,070,080	+				+0.4
1,070,081	-		DDA3937_RS04800	0.72	-0.8
1,070,081	-		DDA3937_RS04800	0.72	+1.3
1,070,081	-		DDA3937_RS04800	0.72	+1.0
1,070,081	-		DDA3937_RS04800	0.72	+0.1
1,070,081	-		DDA3937_RS04800	0.72	-0.4
1,070,081	-		DDA3937_RS04800	0.72	+0.6
1,070,081	-		DDA3937_RS04800	0.72	+1.6
1,070,116	-		DDA3937_RS04800	0.75	-0.1
1,070,404	-				+1.0
1,070,407	+				-1.0
1,070,407	+				-1.2
1,070,407	+				+0.1
1,070,408	-				+0.0
1,070,408	-				-0.4
1,070,408	-				+0.7
1,070,445	+				-0.3
1,070,467	-				+0.0
1,070,482	+				-1.1
1,070,483	-				+0.1
1,070,483	-				-0.2
1,070,490	+				-2.4
1,070,490	+				+0.4
1,070,512	-				+0.6
1,070,596	+				+0.4
1,070,597	-				-0.7
1,070,979	+		DDA3937_RS04805	0.39	-0.1
1,071,237	+		DDA3937_RS04805	0.59	-0.6
1,071,250	-		DDA3937_RS04805	0.60	-0.2
1,071,300	+		DDA3937_RS04805	0.64	-0.5
1,071,300	+		DDA3937_RS04805	0.64	+0.7
1,071,406	+		DDA3937_RS04805	0.72	+0.3
1,071,482	-		DDA3937_RS04805	0.78	+0.1