Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS04740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,046,425	+		DDA3937_RS04735	0.77	-0.2
1,046,455	+		DDA3937_RS04735	0.80	-0.2
1,046,455	+		DDA3937_RS04735	0.80	-1.6
1,046,456	-		DDA3937_RS04735	0.80	+0.5
1,046,456	-		DDA3937_RS04735	0.80	-0.7
1,046,507	+		DDA3937_RS04735	0.84	+0.5
1,046,508	-		DDA3937_RS04735	0.84	-1.0
1,046,508	-		DDA3937_RS04735	0.84	+0.6
1,046,574	+		DDA3937_RS04735	0.89	-0.2
1,046,574	+		DDA3937_RS04735	0.89	-1.0
1,046,575	-		DDA3937_RS04735	0.89	-1.3
1,046,575	-		DDA3937_RS04735	0.89	-0.6
1,046,707	+				-0.1
1,046,708	-				-1.1
1,046,708	-				-1.6
1,046,733	+				+0.2
1,046,734	-				-0.5
1,046,779	+				+1.4
1,046,783	+				-1.2
1,046,783	+				+0.3
1,046,784	-				-0.7
1,046,784	-				+0.4
1,046,784	-				-1.1
1,046,785	+				+0.6
1,046,786	-				+0.6
1,046,869	+				-0.1
1,046,909	-				+1.4
1,046,916	+				+0.4
1,046,929	+				+0.0
1,046,985	+				-0.2
1,047,094	+				-1.7
1,047,101	-				+1.0
1,047,198	+		DDA3937_RS23410	0.53	+0.0
1,047,211	-		DDA3937_RS23410	0.61	+0.4
1,047,292	+				+0.6
1,047,292	+				-1.0
1,047,293	-				+1.0
1,047,297	-				+0.0
1,047,322	+				+0.1
1,047,322	+				-1.0
1,047,322	+				+0.4
1,047,322	+				+0.0
1,047,323	-				-1.3
1,047,358	-				-0.6
1,047,362	+				+0.4
1,047,362	+				-0.8
1,047,362	+				-0.1
1,047,363	-				-0.2
1,047,363	-				-0.1
1,047,363	-				+1.8
1,047,363	-				-0.2
1,047,363	-				-0.7
1,047,363	-				-0.3
1,047,431	-		DDA3937_RS04740	0.17	-0.7
1,047,431	-		DDA3937_RS04740	0.17	-0.7
1,047,536	+		DDA3937_RS04740	0.44	-0.2
1,047,536	+		DDA3937_RS04740	0.44	-0.6
1,047,536	+		DDA3937_RS04740	0.44	-0.7
1,047,537	-		DDA3937_RS04740	0.44	-0.2
1,047,537	-		DDA3937_RS04740	0.44	-1.1
1,047,537	-		DDA3937_RS04740	0.44	+1.0
1,047,537	-		DDA3937_RS04740	0.44	-1.0
1,047,537	-		DDA3937_RS04740	0.44	-0.6
1,047,537	-		DDA3937_RS04740	0.44	-0.0
1,047,594	+		DDA3937_RS04740	0.58	-0.2
1,047,595	-		DDA3937_RS04740	0.59	+0.4
1,047,595	-		DDA3937_RS04740	0.59	+0.1
1,047,595	-		DDA3937_RS04740	0.59	-0.3
1,047,621	+		DDA3937_RS04740	0.65	-2.4
1,047,621	+		DDA3937_RS04740	0.65	-0.7
1,047,622	-		DDA3937_RS04740	0.65	+0.7
1,047,802	+				-1.3
1,047,802	+				-0.4
1,047,833	-				-0.3
1,047,852	-				-0.8
1,047,861	-				+1.0
1,047,861	-				-0.4
1,047,861	-				+1.0
1,047,880	+				-0.3
1,047,892	-				-0.3
1,047,892	-				-0.0
1,047,892	-				-0.4
1,047,915	+				+0.2
1,048,042	+				-0.4
1,048,043	-				-1.0
1,048,043	-				+0.5
1,048,064	+				-1.3
1,048,064	+				-0.6
1,048,064	+				+0.7
1,048,064	+				-2.4
1,048,064	+				+0.2
1,048,065	-				+1.0
1,048,065	-				+0.3
1,048,065	-				-0.2
1,048,065	-				-0.4
1,048,065	-				+0.4
1,048,065	-				+0.4
1,048,065	-				-1.8
1,048,065	-				+0.2
1,048,067	-				+0.3
1,048,098	+				-0.2
1,048,099	-				-1.8
1,048,099	-				+0.4
1,048,187	-				-0.9
1,048,187	-				-0.2
1,048,263	+				+0.1
1,048,264	-				+0.7
1,048,271	-				+0.2
1,048,291	+				-0.3
1,048,292	-				-0.1
1,048,334	+				-0.6
1,048,334	+				+1.5
1,048,335	-				-1.2
1,048,336	+				+0.9
1,048,337	-				-0.8
1,048,345	+				-2.3
1,048,346	-				-0.9
1,048,348	+				-0.2
1,048,379	-				-0.6
1,048,388	-				+0.5
1,048,414	+				-1.3
1,048,417	+				+0.8
1,048,418	-				-1.4
1,048,457	-				+0.2
1,048,457	-				-0.3
1,048,457	-				-0.7
1,048,461	+				-0.9
1,048,461	+				-1.2
1,048,483	+				-2.0
1,048,542	+				-1.0
1,048,543	-				-0.6
1,048,547	+				+0.2
1,048,547	+				+0.4
1,048,547	+				-0.7
1,048,548	-				+0.4
1,048,555	+				-0.3
1,048,555	+				-0.0
1,048,555	+				-0.9
1,048,555	+				+1.5
1,048,555	+				-1.1
1,048,555	+				-0.3
1,048,556	-				-0.8
1,048,556	-				-0.5
1,048,556	-				+0.5
1,048,741	-				-0.0
1,048,741	-				-0.6
1,048,741	-				+0.3