Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS04600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,014,994	-				-1.8
1,014,996	-				+1.1
1,015,004	+				+0.6
1,015,008	+				-1.8
1,015,024	+				-1.6
1,015,025	-				-0.3
1,015,028	-				+1.5
1,015,228	+		DDA3937_RS04595	0.25	+0.1
1,015,229	-				+2.6
1,015,264	-		DDA3937_RS04595	0.29	-1.7
1,015,319	-		DDA3937_RS04595	0.35	+0.7
1,015,321	+		DDA3937_RS04595	0.36	-0.3
1,015,321	+		DDA3937_RS04595	0.36	-0.6
1,015,321	+		DDA3937_RS04595	0.36	-0.0
1,015,322	-		DDA3937_RS04595	0.36	-0.8
1,015,322	-		DDA3937_RS04595	0.36	-0.9
1,015,322	-		DDA3937_RS04595	0.36	+0.2
1,015,374	+		DDA3937_RS04595	0.41	+0.1
1,015,456	+		DDA3937_RS04595	0.50	-0.2
1,015,456	+		DDA3937_RS04595	0.50	+0.3
1,015,456	+		DDA3937_RS04595	0.50	-0.4
1,015,460	+		DDA3937_RS04595	0.51	-1.8
1,015,460	+		DDA3937_RS04595	0.51	-0.2
1,015,461	-		DDA3937_RS04595	0.51	-0.1
1,015,692	+		DDA3937_RS04595	0.77	-1.0
1,015,692	+		DDA3937_RS04595	0.77	-0.6
1,015,693	-		DDA3937_RS04595	0.77	-1.3
1,015,803	+		DDA3937_RS04595	0.89	+0.3
1,015,803	+		DDA3937_RS04595	0.89	-0.5
1,015,804	-		DDA3937_RS04595	0.89	-1.5
1,015,804	-		DDA3937_RS04595	0.89	-1.0
1,015,804	-		DDA3937_RS04595	0.89	-0.1
1,015,819	+				-0.8
1,015,819	+				-0.3
1,015,819	+				+0.3
1,015,820	-				-1.2
1,015,870	-				-1.9
1,015,920	+				-0.4
1,015,920	+				+0.1
1,016,103	+		DDA3937_RS04600	0.62	-1.1
1,016,103	+		DDA3937_RS04600	0.62	+0.5
1,016,104	-		DDA3937_RS04600	0.63	-1.5
1,016,158	+		DDA3937_RS04600	0.89	-1.5
1,016,159	-		DDA3937_RS04600	0.89	-0.9
1,016,159	-		DDA3937_RS04600	0.89	-0.3
1,016,167	+				+0.5
1,016,174	+				+0.8
1,016,174	+				-0.6
1,016,174	+				-0.5
1,016,174	+				-0.4
1,016,174	+				-0.3
1,016,175	-				+0.1
1,016,175	-				-0.2
1,016,175	-				+0.4
1,016,175	-				+0.8
1,016,175	-				-0.8
1,016,175	-				-0.4
1,016,175	-				+0.1
1,016,176	+				-1.5
1,016,176	+				-0.5
1,016,176	+				-0.8
1,016,176	+				-0.4
1,016,176	+				-0.2
1,016,176	+				+0.5
1,016,176	+				-0.8
1,016,176	+				-0.8
1,016,176	+				-0.7
1,016,176	+				-0.9
1,016,177	-				+0.8
1,016,177	-				-0.7
1,016,177	-				+0.3
1,016,177	-				-0.5
1,016,181	+				+0.3
1,016,181	+				-1.3
1,016,181	+				-0.4
1,016,181	+				+0.4
1,016,182	-				-0.1
1,016,182	-				-0.1
1,016,182	-				-0.6
1,016,182	-				-0.5
1,016,182	-				-0.1
1,016,184	+				+0.1
1,016,184	+				-0.2
1,016,184	+				-0.1
1,016,184	+				-0.1
1,016,184	+				-0.9
1,016,184	+				-1.8
1,016,185	-				-1.3
1,016,185	-				-1.9
1,016,185	-				-0.4
1,016,185	-				-1.4
1,016,185	-				-0.6
1,016,185	-				+0.3
1,016,185	-				+1.1
1,016,185	-				+0.2
1,016,223	-				-0.4
1,016,278	-				+0.5
1,016,295	+				-0.4
1,016,309	-				-0.3
1,016,309	-				-0.1
1,016,326	+				-0.3
1,016,327	-				-0.5
1,016,327	-				+1.2
1,016,327	-				+0.4
1,016,327	-				-0.2
1,016,330	+				-0.1
1,016,330	+				-0.7
1,016,330	+				-0.7
1,016,331	-				-0.3
1,016,331	-				+0.3
1,016,331	-				-0.2
1,016,652	-		DDA3937_RS04605	0.32	-1.5
1,016,652	-		DDA3937_RS04605	0.32	-0.9
1,016,761	-		DDA3937_RS04605	0.43	+0.1
1,016,762	+		DDA3937_RS04605	0.43	-0.2
1,016,762	+		DDA3937_RS04605	0.43	+0.1
1,016,763	-		DDA3937_RS04605	0.43	+0.1
1,016,763	-		DDA3937_RS04605	0.43	+0.9
1,016,763	-		DDA3937_RS04605	0.43	+0.5