Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00095

Experiment: Upstate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Upstate
21,454	+		DZA65_RS00090	0.26	+0.5
21,454	+		DZA65_RS00090	0.26	-2.6
21,455	-		DZA65_RS00090	0.26	+0.1
21,458	-		DZA65_RS00090	0.26	-0.5
21,458	-		DZA65_RS00090	0.26	+1.1
21,471	+		DZA65_RS00090	0.27	-0.6
21,471	+		DZA65_RS00090	0.27	+0.9
21,471	+		DZA65_RS00090	0.27	-0.1
21,547	+		DZA65_RS00090	0.33	+1.1
21,559	+		DZA65_RS00090	0.34	+0.8
21,559	+		DZA65_RS00090	0.34	-0.2
21,559	+		DZA65_RS00090	0.34	-1.9
21,559	+		DZA65_RS00090	0.34	+0.9
21,560	-		DZA65_RS00090	0.35	+0.2
21,560	-		DZA65_RS00090	0.35	+0.7
21,565	-		DZA65_RS00090	0.35	-0.6
21,575	-		DZA65_RS00090	0.36	+0.7
21,575	-		DZA65_RS00090	0.36	-0.0
21,598	+		DZA65_RS00090	0.38	+0.7
21,598	+		DZA65_RS00090	0.38	-0.7
21,598	+		DZA65_RS00090	0.38	-0.9
21,599	-		DZA65_RS00090	0.38	-0.3
21,656	+		DZA65_RS00090	0.42	-0.9
21,662	-		DZA65_RS00090	0.43	+0.7
21,662	-		DZA65_RS00090	0.43	+0.1
21,662	-		DZA65_RS00090	0.43	+1.6
21,681	+		DZA65_RS00090	0.45	+0.6
21,681	+		DZA65_RS00090	0.45	-0.6
21,681	+		DZA65_RS00090	0.45	+0.1
21,682	-		DZA65_RS00090	0.45	+0.4
21,682	-		DZA65_RS00090	0.45	+0.3
21,682	-		DZA65_RS00090	0.45	+0.1
21,682	-		DZA65_RS00090	0.45	+2.3
21,771	-		DZA65_RS00090	0.52	-1.9
21,826	+		DZA65_RS00090	0.56	+0.3
21,827	-		DZA65_RS00090	0.57	-0.0
21,859	+		DZA65_RS00090	0.59	-0.1
21,859	+		DZA65_RS00090	0.59	-2.1
21,860	-		DZA65_RS00090	0.59	+0.7
21,880	+		DZA65_RS00090	0.61	+0.7
21,880	+		DZA65_RS00090	0.61	-1.3
21,880	+		DZA65_RS00090	0.61	-0.1
21,880	+		DZA65_RS00090	0.61	+0.7
21,880	+		DZA65_RS00090	0.61	+0.6
21,881	-		DZA65_RS00090	0.61	-0.3
21,881	-		DZA65_RS00090	0.61	-0.3
21,881	-		DZA65_RS00090	0.61	-0.9
21,881	-		DZA65_RS00090	0.61	-1.0
21,881	-		DZA65_RS00090	0.61	+0.3
21,881	-		DZA65_RS00090	0.61	+0.2
21,919	-		DZA65_RS00090	0.64	+0.1
21,942	+		DZA65_RS00090	0.66	+1.6
21,942	+		DZA65_RS00090	0.66	-1.1
21,942	+		DZA65_RS00090	0.66	+0.5
21,942	+		DZA65_RS00090	0.66	+0.6
21,942	+		DZA65_RS00090	0.66	+0.7
21,943	-		DZA65_RS00090	0.66	-0.2
21,943	-		DZA65_RS00090	0.66	-1.0
21,945	+		DZA65_RS00090	0.66	+0.1
21,945	+		DZA65_RS00090	0.66	-2.3
21,945	+		DZA65_RS00090	0.66	-0.3
21,945	+		DZA65_RS00090	0.66	+0.7
21,945	+		DZA65_RS00090	0.66	+0.9
21,988	+		DZA65_RS00090	0.70	-0.9
22,011	-		DZA65_RS00090	0.72	-1.9
22,013	-		DZA65_RS00090	0.72	+0.7
22,019	+		DZA65_RS00090	0.72	-1.6
22,019	+		DZA65_RS00090	0.72	-0.8
22,020	-		DZA65_RS00090	0.72	-0.3
22,020	-		DZA65_RS00090	0.72	-0.6
22,020	-		DZA65_RS00090	0.72	+0.1
22,020	-		DZA65_RS00090	0.72	-0.0
22,084	+		DZA65_RS00090	0.78	+1.3
22,084	+		DZA65_RS00090	0.78	-1.6
22,084	+		DZA65_RS00090	0.78	+2.3
22,085	-		DZA65_RS00090	0.78	+0.9
22,085	-		DZA65_RS00090	0.78	+0.8
22,094	-		DZA65_RS00090	0.79	-1.0
22,094	-		DZA65_RS00090	0.79	+0.7
22,134	+		DZA65_RS00090	0.82	-0.1
22,134	+		DZA65_RS00090	0.82	-2.3
22,134	+		DZA65_RS00090	0.82	-1.4
22,134	+		DZA65_RS00090	0.82	+1.2
22,134	+		DZA65_RS00090	0.82	-0.1
22,186	-		DZA65_RS00090	0.86	+0.7
22,186	-		DZA65_RS00090	0.86	+0.2
22,205	+		DZA65_RS00090	0.88	-1.3
22,205	+		DZA65_RS00090	0.88	+0.1
22,205	+		DZA65_RS00090	0.88	-1.6
22,205	+		DZA65_RS00090	0.88	-1.7
22,205	+		DZA65_RS00090	0.88	-0.1
22,205	+		DZA65_RS00090	0.88	+0.6
22,205	+		DZA65_RS00090	0.88	-0.2
22,205	+		DZA65_RS00090	0.88	-1.3
22,206	-		DZA65_RS00090	0.88	+0.7
22,206	-		DZA65_RS00090	0.88	+0.4
22,206	-		DZA65_RS00090	0.88	+0.4
22,206	-		DZA65_RS00090	0.88	+0.8
22,206	-		DZA65_RS00090	0.88	+1.1
22,206	-		DZA65_RS00090	0.88	-0.7
22,206	-		DZA65_RS00090	0.88	+0.5
22,206	-		DZA65_RS00090	0.88	+0.3
22,206	-		DZA65_RS00090	0.88	+1.1
22,206	-		DZA65_RS00090	0.88	+0.7
22,206	-		DZA65_RS00090	0.88	-0.0
22,206	-		DZA65_RS00090	0.88	+0.5
22,206	-		DZA65_RS00090	0.88	+0.0
22,336	+				-0.4
22,336	+				-0.0
22,336	+				+0.7
22,336	+				-0.3
22,336	+				-0.0
22,336	+				+0.0
22,337	-				+0.8
22,337	-				+0.3
22,337	-				-0.0
22,352	+				+0.2
22,352	+				+1.1
22,353	-				-0.1
22,353	-				+0.3
22,461	+				-1.3
22,461	+				+1.5
22,461	+				-1.8
22,461	+				+1.2
22,461	+				-1.3
22,462	-				-0.3
22,462	-				-0.9
22,462	-				+0.1
22,465	+				-0.3
22,465	+				-2.3
22,465	+				-1.1
22,465	+				-0.6
22,465	+				+0.2
22,465	+				+1.5
22,466	-				+0.6
22,466	-				-1.1
22,466	-				-1.3
22,466	-				+0.1
22,466	-				-1.9
22,466	-				+0.7
22,466	-				-0.3
22,466	-				+0.1
22,466	-				+0.7
22,466	-				-0.6
22,466	-				+0.7
22,466	-				-2.0
22,466	-				-0.9
22,466	-				-0.6
22,496	+		DZA65_RS00095	0.25	-0.3
22,496	+		DZA65_RS00095	0.25	-1.0
22,497	-		DZA65_RS00095	0.25	-0.7
22,616	-				+0.2
22,616	-				-2.1
22,729	+				-0.1
22,730	-				-0.5
22,730	-				-0.9
22,730	-				+0.4
22,730	-				-0.3
22,793	+		DZA65_RS00100	0.14	+0.2
22,794	-		DZA65_RS00100	0.14	+1.1
22,822	-		DZA65_RS00100	0.17	+0.4
22,822	-		DZA65_RS00100	0.17	+0.7
22,877	+		DZA65_RS00100	0.22	+0.2
22,877	+		DZA65_RS00100	0.22	-0.1
22,877	+		DZA65_RS00100	0.22	-1.0
22,877	+		DZA65_RS00100	0.22	+0.6
22,877	+		DZA65_RS00100	0.22	+0.4
22,878	-		DZA65_RS00100	0.22	+1.9
22,878	-		DZA65_RS00100	0.22	-0.5
22,878	-		DZA65_RS00100	0.22	+0.7
22,890	-		DZA65_RS00100	0.23	+0.8
22,890	-		DZA65_RS00100	0.23	+1.5
22,890	-		DZA65_RS00100	0.23	+1.3
22,890	-		DZA65_RS00100	0.23	-0.5
22,890	-		DZA65_RS00100	0.23	+0.5
22,914	-		DZA65_RS00100	0.25	+0.4
23,022	+		DZA65_RS00100	0.35	+1.7
23,022	+		DZA65_RS00100	0.35	-0.8
23,023	-		DZA65_RS00100	0.35	+1.1
23,023	-		DZA65_RS00100	0.35	+2.1
23,027	+		DZA65_RS00100	0.35	+0.4
23,027	+		DZA65_RS00100	0.35	+1.9
23,027	+		DZA65_RS00100	0.35	+0.6
23,027	+		DZA65_RS00100	0.35	-1.9
23,027	+		DZA65_RS00100	0.35	-1.0
23,027	+		DZA65_RS00100	0.35	-0.9
23,027	+		DZA65_RS00100	0.35	+0.1
23,027	+		DZA65_RS00100	0.35	-1.4
23,027	+		DZA65_RS00100	0.35	+1.0
23,027	+		DZA65_RS00100	0.35	+0.0
23,027	+		DZA65_RS00100	0.35	-0.1
23,028	-		DZA65_RS00100	0.35	-1.9
23,028	-		DZA65_RS00100	0.35	-0.7
23,028	-		DZA65_RS00100	0.35	+0.5
23,028	-		DZA65_RS00100	0.35	-2.6
23,028	-		DZA65_RS00100	0.35	+1.7
23,028	-		DZA65_RS00100	0.35	+0.2
23,028	-		DZA65_RS00100	0.35	-0.4
23,028	-		DZA65_RS00100	0.35	+1.1
23,028	-		DZA65_RS00100	0.35	+0.8
23,028	-		DZA65_RS00100	0.35	-2.1
23,028	-		DZA65_RS00100	0.35	+1.1
23,085	+		DZA65_RS00100	0.40	+1.2
23,086	-		DZA65_RS00100	0.40	+0.2
23,087	+		DZA65_RS00100	0.40	-0.9
23,087	+		DZA65_RS00100	0.40	+0.4
23,087	+		DZA65_RS00100	0.40	+0.8
23,087	+		DZA65_RS00100	0.40	+0.9
23,087	+		DZA65_RS00100	0.40	+1.1
23,087	+		DZA65_RS00100	0.40	-0.0
23,088	-		DZA65_RS00100	0.41	-0.3
23,143	+		DZA65_RS00100	0.45	+0.3
23,143	+		DZA65_RS00100	0.45	-1.6
23,143	+		DZA65_RS00100	0.45	-0.9
23,144	-		DZA65_RS00100	0.46	+1.3
23,144	-		DZA65_RS00100	0.46	+0.7
23,144	-		DZA65_RS00100	0.46	-0.7
23,145	+		DZA65_RS00100	0.46	+0.7
23,145	+		DZA65_RS00100	0.46	-1.4
23,145	+		DZA65_RS00100	0.46	+2.8
23,145	+		DZA65_RS00100	0.46	+0.1
23,145	+		DZA65_RS00100	0.46	+0.6
23,145	+		DZA65_RS00100	0.46	+0.4
23,145	+		DZA65_RS00100	0.46	-0.0
23,146	-		DZA65_RS00100	0.46	-1.6
23,146	-		DZA65_RS00100	0.46	+0.6
23,146	-		DZA65_RS00100	0.46	-0.3
23,146	-		DZA65_RS00100	0.46	+0.7
23,381	+		DZA65_RS00100	0.67	+0.3
23,382	-		DZA65_RS00100	0.67	+0.2
23,382	-		DZA65_RS00100	0.67	-0.7
23,415	+		DZA65_RS00100	0.70	-0.8
23,415	+		DZA65_RS00100	0.70	-0.4
23,415	+		DZA65_RS00100	0.70	+1.7
23,415	+		DZA65_RS00100	0.70	-0.9
23,416	-		DZA65_RS00100	0.70	-0.8
23,443	-		DZA65_RS00100	0.72	+0.4
23,443	-		DZA65_RS00100	0.72	-0.4
23,549	+		DZA65_RS00100	0.82	+1.0
23,549	+		DZA65_RS00100	0.82	+1.7
23,550	-		DZA65_RS00100	0.82	-0.4
23,550	-		DZA65_RS00100	0.82	-0.6
23,570	+		DZA65_RS00100	0.84	-0.3
23,571	-		DZA65_RS00100	0.84	+0.6
23,571	-		DZA65_RS00100	0.84	-0.1
23,571	-		DZA65_RS00100	0.84	+0.1