Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22475

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,858,658	+		DZA65_RS22465	0.61	+0.3
4,858,865	+		DZA65_RS22465	0.77	-0.2
4,858,865	+		DZA65_RS22465	0.77	-0.6
4,858,865	+		DZA65_RS22465	0.77	+0.3
4,858,865	+		DZA65_RS22465	0.77	-0.4
4,858,866	-		DZA65_RS22465	0.77	+1.7
4,858,866	-		DZA65_RS22465	0.77	-0.9
4,858,866	-		DZA65_RS22465	0.77	-1.4
4,858,871	+				-0.7
4,858,872	-		DZA65_RS22465	0.77	-0.7
4,858,883	+		DZA65_RS22465	0.78	+0.7
4,858,883	+		DZA65_RS22465	0.78	-0.7
4,858,883	+		DZA65_RS22465	0.78	+2.9
4,858,883	+		DZA65_RS22465	0.78	+0.6
4,858,884	-		DZA65_RS22465	0.78	-0.4
4,858,884	-		DZA65_RS22465	0.78	+0.3
4,858,884	-		DZA65_RS22465	0.78	+1.9
4,858,889	+		DZA65_RS22465	0.78	-1.0
4,858,889	+		DZA65_RS22465	0.78	+1.5
4,858,889	+		DZA65_RS22465	0.78	-0.0
4,858,889	+		DZA65_RS22465	0.78	+0.1
4,858,889	+		DZA65_RS22465	0.78	-0.7
4,858,889	+		DZA65_RS22465	0.78	-0.6
4,858,889	+		DZA65_RS22465	0.78	+0.2
4,858,889	+		DZA65_RS22465	0.78	+3.2
4,858,889	+		DZA65_RS22465	0.78	+0.4
4,858,889	+		DZA65_RS22465	0.78	+1.7
4,858,890	-		DZA65_RS22465	0.78	+0.8
4,858,890	-		DZA65_RS22465	0.78	-0.6
4,858,890	-				+1.8
4,858,890	-		DZA65_RS22465	0.78	-0.7
4,858,890	-		DZA65_RS22465	0.78	+0.8
4,859,158	+				+0.5
4,859,158	+				-0.2
4,859,159	-				-0.0
4,859,159	-				+0.2
4,859,159	-				+0.5
4,859,159	-				+0.4
4,859,159	-				-0.0
4,859,230	+		DZA65_RS22470	0.19	-0.3
4,859,230	+		DZA65_RS22470	0.19	+0.7
4,859,230	+		DZA65_RS22470	0.19	-1.6
4,859,230	+		DZA65_RS22470	0.19	+0.0
4,859,230	+		DZA65_RS22470	0.19	+0.1
4,859,231	-		DZA65_RS22470	0.20	+1.2
4,859,231	-		DZA65_RS22470	0.20	-0.5
4,859,231	-		DZA65_RS22470	0.20	-1.0
4,859,231	-		DZA65_RS22470	0.20	-0.9
4,859,231	-		DZA65_RS22470	0.20	-0.0
4,859,231	-		DZA65_RS22470	0.20	-0.6
4,859,231	-		DZA65_RS22470	0.20	+0.8
4,859,232	+		DZA65_RS22470	0.20	-0.5
4,859,232	+		DZA65_RS22470	0.20	-1.7
4,859,232	+		DZA65_RS22470	0.20	-1.0
4,859,232	+		DZA65_RS22470	0.20	-1.7
4,859,232	+		DZA65_RS22470	0.20	+0.1
4,859,232	+		DZA65_RS22470	0.20	-0.7
4,859,232	+		DZA65_RS22470	0.20	-0.4
4,859,232	+		DZA65_RS22470	0.20	-0.7
4,859,232	+		DZA65_RS22470	0.20	+0.6
4,859,232	+		DZA65_RS22470	0.20	-1.8
4,859,232	+		DZA65_RS22470	0.20	-2.3
4,859,233	-		DZA65_RS22470	0.20	-0.4
4,859,233	-				+0.8
4,859,458	+				+0.6
4,859,458	+				+0.4
4,859,458	+				+0.3
4,859,459	-				+0.4
4,859,466	+				+0.3
4,859,466	+				-0.4
4,859,467	-				-1.1
4,859,467	-				+0.3
4,859,467	-				-0.4
4,859,467	-				+0.4
4,859,467	-				+0.2
4,859,467	-				+1.6
4,859,467	-				+1.7
4,859,467	-				-0.7
4,859,467	-				-1.0
4,859,467	-				-1.0
4,859,467	-				-2.0
4,859,509	-				+1.6
4,859,522	+				-0.6
4,859,522	+				-0.2
4,859,522	+				-1.2
4,859,522	+				+2.4
4,859,522	+				-0.7
4,859,522	+				-0.7
4,859,522	+				+0.6
4,859,522	+				-1.9
4,859,522	+				-0.6
4,859,522	+				+0.4
4,859,522	+				-0.2
4,859,522	+				+0.3
4,859,522	+				-0.3
4,859,522	+				-0.4
4,859,522	+				+0.4
4,859,522	+				+1.1
4,859,523	-				-1.9
4,859,523	-				-0.7
4,859,523	-				+1.0
4,859,523	-				+0.4
4,859,523	-				-1.0
4,859,523	-				-0.0
4,859,523	-				+1.4
4,859,523	-				-1.3
4,859,523	-				+1.6
4,859,523	-				-0.3
4,859,523	-				-0.1
4,859,526	+				-0.4
4,859,527	-				-0.2
4,859,527	-				+0.7
4,859,527	-				-0.2
4,859,540	+				+0.8
4,859,540	+				-1.3
4,859,540	+				+0.5
4,859,540	+				+1.8
4,859,540	+				+0.8
4,859,540	+				+0.3
4,859,540	+				-1.1
4,859,540	+				-0.2
4,859,540	+				-0.6
4,859,540	+				+0.4
4,859,541	-				+1.1
4,859,541	-				-0.2
4,859,541	-				-1.5
4,859,541	-				+1.3
4,859,541	-				+1.4
4,859,541	-				+0.6
4,859,544	+				+2.1
4,859,544	+				-0.3
4,859,544	+				+0.6
4,859,544	+				-0.3
4,859,544	+				+0.3
4,859,545	-				-0.5
4,859,545	-				-1.6
4,859,545	-				+0.3
4,859,545	-				-1.1
4,859,545	-				-0.3
4,859,621	+				+0.2
4,859,621	+				-1.7
4,859,621	+				-0.2
4,859,622	-				-0.3
4,859,622	-				+2.3
4,859,667	+				-0.9
4,859,667	+				+0.3
4,859,667	+				+0.4
4,859,667	+				+0.3
4,859,667	+				+0.5
4,859,667	+				+0.1
4,859,668	-				+1.3
4,859,668	-				+3.2
4,859,734	+				-0.2
4,859,896	+		DZA65_RS22475	0.16	-0.4
4,859,933	+		DZA65_RS22475	0.18	+0.5
4,859,933	+		DZA65_RS22475	0.18	-1.9
4,859,997	+		DZA65_RS22475	0.22	+0.4
4,859,998	-		DZA65_RS22475	0.22	-0.5
4,860,027	+		DZA65_RS22475	0.24	+0.9
4,860,027	+		DZA65_RS22475	0.24	+0.8
4,860,028	-		DZA65_RS22475	0.24	+0.7
4,860,028	-		DZA65_RS22475	0.24	-0.4
4,860,028	-		DZA65_RS22475	0.24	-0.2
4,860,036	+		DZA65_RS22475	0.24	-0.7
4,860,036	+		DZA65_RS22475	0.24	+0.8
4,860,036	+		DZA65_RS22475	0.24	-0.2
4,860,036	+		DZA65_RS22475	0.24	+0.1
4,860,036	+		DZA65_RS22475	0.24	+0.3
4,860,036	+		DZA65_RS22475	0.24	+0.8
4,860,036	+		DZA65_RS22475	0.24	-2.5
4,860,036	+		DZA65_RS22475	0.24	-0.2
4,860,037	-		DZA65_RS22475	0.24	+1.6
4,860,112	-		DZA65_RS22475	0.29	+1.8
4,860,198	+		DZA65_RS22475	0.34	+0.7
4,860,198	+		DZA65_RS22475	0.34	-0.4
4,860,198	+		DZA65_RS22475	0.34	-0.1
4,860,199	-		DZA65_RS22475	0.34	-2.7
4,860,199	-		DZA65_RS22475	0.34	-0.9
4,860,199	-		DZA65_RS22475	0.34	+0.4
4,860,199	-		DZA65_RS22475	0.34	+1.6
4,860,226	+		DZA65_RS22475	0.35	-1.1
4,860,226	+		DZA65_RS22475	0.35	-0.7
4,860,226	+		DZA65_RS22475	0.35	+0.5
4,860,226	+		DZA65_RS22475	0.35	-1.0
4,860,227	-		DZA65_RS22475	0.35	+0.1
4,860,227	-		DZA65_RS22475	0.35	-0.3
4,860,231	-		DZA65_RS22475	0.36	+0.7
4,860,260	-		DZA65_RS22475	0.37	-0.0
4,860,401	+		DZA65_RS22475	0.46	+1.3
4,860,401	+		DZA65_RS22475	0.46	+0.1
4,860,458	+		DZA65_RS22475	0.49	+0.0
4,860,489	+		DZA65_RS22475	0.51	+0.1
4,860,536	-		DZA65_RS22475	0.53	+1.1
4,860,553	-		DZA65_RS22475	0.54	+0.2
4,860,553	-		DZA65_RS22475	0.54	-1.2
4,860,597	+		DZA65_RS22475	0.57	-1.2
4,860,597	+		DZA65_RS22475	0.57	+0.8
4,860,597	+		DZA65_RS22475	0.57	-0.2
4,860,597	+		DZA65_RS22475	0.57	+1.5
4,860,597	+		DZA65_RS22475	0.57	+0.3
4,860,597	+		DZA65_RS22475	0.57	+0.0
4,860,597	+		DZA65_RS22475	0.57	+1.3
4,860,597	+		DZA65_RS22475	0.57	+0.1
4,860,598	-		DZA65_RS22475	0.57	+0.5
4,860,598	-		DZA65_RS22475	0.57	+0.4
4,860,598	-		DZA65_RS22475	0.57	-0.5
4,860,598	-		DZA65_RS22475	0.57	-0.2
4,860,762	-		DZA65_RS22475	0.67	-0.3
4,860,825	-		DZA65_RS22475	0.70	-0.3
4,860,925	+		DZA65_RS22475	0.76	+0.3
4,860,925	+		DZA65_RS22475	0.76	+1.1
4,860,925	+		DZA65_RS22475	0.76	+2.5
4,860,925	+		DZA65_RS22475	0.76	+0.8
4,860,925	+		DZA65_RS22475	0.76	-1.2
4,861,136	-		DZA65_RS22475	0.89	-0.1
4,861,143	+		DZA65_RS22475	0.89	+1.0
4,861,144	-		DZA65_RS22475	0.89	+2.0
4,861,221	+				-0.4
4,861,325	+				-0.2
4,861,325	+				+0.6
4,861,325	+				-2.3
4,861,325	+				-1.3
4,861,325	+				+0.5
4,861,325	+				+0.4
4,861,325	+				-0.2
4,861,325	+				-0.2
4,861,326	-				-0.2
4,861,326	-				+0.3
4,861,326	-				-0.5
4,861,326	-				+1.2
4,861,326	-				+0.2
4,861,424	+		DZA65_RS22480	0.22	-0.6
4,861,424	+		DZA65_RS22480	0.22	+0.5
4,861,424	+		DZA65_RS22480	0.22	+1.0
4,861,424	+		DZA65_RS22480	0.22	+0.3
4,861,469	+		DZA65_RS22480	0.33	-1.2
4,861,469	+		DZA65_RS22480	0.33	+1.4
4,861,469	+		DZA65_RS22480	0.33	+0.1
4,861,469	+		DZA65_RS22480	0.33	+1.2
4,861,469	+		DZA65_RS22480	0.33	-0.6
4,861,469	+		DZA65_RS22480	0.33	+1.6
4,861,470	-		DZA65_RS22480	0.33	-0.2
4,861,470	-		DZA65_RS22480	0.33	-0.2
4,861,470	-		DZA65_RS22480	0.33	+0.3
4,861,470	-		DZA65_RS22480	0.33	-0.4
4,861,470	-		DZA65_RS22480	0.33	-1.0
4,861,470	-		DZA65_RS22480	0.33	+0.8
4,861,505	+		DZA65_RS22480	0.41	-0.3
4,861,506	-		DZA65_RS22480	0.41	-1.2
4,861,506	-		DZA65_RS22480	0.41	+1.4
4,861,526	-		DZA65_RS22480	0.46	+0.0
4,861,538	+		DZA65_RS22480	0.49	-1.2
4,861,556	+		DZA65_RS22480	0.53	+0.1
4,861,557	-		DZA65_RS22480	0.53	+0.7
4,861,557	-		DZA65_RS22480	0.53	-0.1
4,861,557	-		DZA65_RS22480	0.53	-2.3
4,861,557	-		DZA65_RS22480	0.53	-0.9
4,861,557	-		DZA65_RS22480	0.53	+1.3
4,861,557	-		DZA65_RS22480	0.53	+0.0
4,861,664	+		DZA65_RS22480	0.78	-0.7
4,861,664	+		DZA65_RS22480	0.78	+1.5
4,861,664	+		DZA65_RS22480	0.78	+1.3
4,861,665	-		DZA65_RS22480	0.79	-0.4
4,861,787	+				-1.0
4,861,787	+				+0.3
4,861,787	+				+0.1
4,861,787	+				-0.4
4,861,787	+				-1.0
4,861,787	+				-0.8
4,861,788	-				+1.2
4,861,788	-				-0.1
4,861,788	-				-0.6
4,861,788	-				+0.1
4,861,788	-				-0.0
4,861,788	-				-0.3
4,861,788	-				+0.8
4,861,795	-				+0.7
4,861,843	-				+1.0
4,861,917	+		DZA65_RS22485	0.22	-0.2
4,861,918	-		DZA65_RS22485	0.22	+0.1
4,861,918	-		DZA65_RS22485	0.22	+2.7
4,862,034	+		DZA65_RS22485	0.41	-0.2
4,862,034	+		DZA65_RS22485	0.41	-0.9
4,862,034	+		DZA65_RS22485	0.41	+2.0
4,862,035	-		DZA65_RS22485	0.41	+1.5
4,862,035	-		DZA65_RS22485	0.41	+0.3
4,862,035	-		DZA65_RS22485	0.41	+0.8
4,862,035	-		DZA65_RS22485	0.41	+1.2
4,862,069	+				+0.4
4,862,069	+		DZA65_RS22485	0.47	-1.5
4,862,069	+		DZA65_RS22485	0.47	+1.4
4,862,069	+		DZA65_RS22485	0.47	-1.1
4,862,208	-		DZA65_RS22485	0.70	+0.0
4,862,310	+		DZA65_RS22485	0.87	-2.0