Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22300

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,822,703	-		DZA65_RS22295	0.11	+0.1
4,822,763	-		DZA65_RS22295	0.18	-0.2
4,822,781	-		DZA65_RS22295	0.20	-0.2
4,822,781	-		DZA65_RS22295	0.20	+0.3
4,822,793	+		DZA65_RS22295	0.21	+0.8
4,822,793	+		DZA65_RS22295	0.21	+0.3
4,822,810	+		DZA65_RS22295	0.23	-0.5
4,822,810	+		DZA65_RS22295	0.23	+2.1
4,822,810	+		DZA65_RS22295	0.23	+0.8
4,822,810	+		DZA65_RS22295	0.23	-2.0
4,822,810	+		DZA65_RS22295	0.23	-0.2
4,822,810	+		DZA65_RS22295	0.23	+0.5
4,822,810	+		DZA65_RS22295	0.23	+0.6
4,822,810	+		DZA65_RS22295	0.23	+2.3
4,822,810	+		DZA65_RS22295	0.23	-0.2
4,822,810	+		DZA65_RS22295	0.23	+1.5
4,822,810	+		DZA65_RS22295	0.23	+1.1
4,822,810	+		DZA65_RS22295	0.23	+2.3
4,822,810	+		DZA65_RS22295	0.23	+2.8
4,822,810	+		DZA65_RS22295	0.23	+1.6
4,822,810	+		DZA65_RS22295	0.23	+2.2
4,822,810	+		DZA65_RS22295	0.23	-0.2
4,822,810	+		DZA65_RS22295	0.23	+1.1
4,822,810	+		DZA65_RS22295	0.23	+2.8
4,822,811	-		DZA65_RS22295	0.23	+1.2
4,822,811	-		DZA65_RS22295	0.23	-1.0
4,822,811	-		DZA65_RS22295	0.23	-0.6
4,822,811	-		DZA65_RS22295	0.23	-1.4
4,822,811	-		DZA65_RS22295	0.23	+0.9
4,822,811	-		DZA65_RS22295	0.23	+0.8
4,822,811	-		DZA65_RS22295	0.23	-0.9
4,822,811	-		DZA65_RS22295	0.23	+0.0
4,822,811	-		DZA65_RS22295	0.23	+0.8
4,822,811	-		DZA65_RS22295	0.23	-0.2
4,822,811	-		DZA65_RS22295	0.23	-0.1
4,822,811	-		DZA65_RS22295	0.23	+1.6
4,822,811	-		DZA65_RS22295	0.23	+0.8
4,822,811	-		DZA65_RS22295	0.23	+1.6
4,822,811	-		DZA65_RS22295	0.23	-1.2
4,822,811	-		DZA65_RS22295	0.23	+0.2
4,822,836	-		DZA65_RS22295	0.26	+1.4
4,822,836	-		DZA65_RS22295	0.26	+0.5
4,822,856	+		DZA65_RS22295	0.28	+0.2
4,822,857	-		DZA65_RS22295	0.28	-0.0
4,822,857	-		DZA65_RS22295	0.28	+1.2
4,822,857	-		DZA65_RS22295	0.28	-0.3
4,822,861	+		DZA65_RS22295	0.28	+0.6
4,822,861	+		DZA65_RS22295	0.28	-0.7
4,822,861	+		DZA65_RS22295	0.28	-0.1
4,822,861	+		DZA65_RS22295	0.28	+1.6
4,822,861	+		DZA65_RS22295	0.28	+0.4
4,822,861	+		DZA65_RS22295	0.28	-0.3
4,822,861	+		DZA65_RS22295	0.28	+1.8
4,822,861	+		DZA65_RS22295	0.28	+1.8
4,822,861	+		DZA65_RS22295	0.28	+0.2
4,822,861	+		DZA65_RS22295	0.28	-0.1
4,822,861	+		DZA65_RS22295	0.28	+1.8
4,822,861	+		DZA65_RS22295	0.28	+0.7
4,822,861	+		DZA65_RS22295	0.28	-0.3
4,822,861	+		DZA65_RS22295	0.28	+0.5
4,822,861	+				+1.4
4,822,862	-		DZA65_RS22295	0.28	+1.3
4,822,862	-		DZA65_RS22295	0.28	-1.2
4,822,862	-		DZA65_RS22295	0.28	-0.7
4,822,862	-		DZA65_RS22295	0.28	-0.4
4,822,862	-		DZA65_RS22295	0.28	+1.0
4,822,862	-		DZA65_RS22295	0.28	-0.3
4,822,862	-		DZA65_RS22295	0.28	-0.3
4,822,862	-		DZA65_RS22295	0.28	+2.0
4,822,868	+		DZA65_RS22295	0.29	+0.8
4,822,868	+		DZA65_RS22295	0.29	-0.2
4,822,868	+		DZA65_RS22295	0.29	+0.6
4,822,869	-		DZA65_RS22295	0.29	+0.4
4,822,885	+		DZA65_RS22295	0.31	+3.4
4,822,885	+		DZA65_RS22295	0.31	+0.2
4,822,885	+		DZA65_RS22295	0.31	+0.7
4,822,885	+		DZA65_RS22295	0.31	+1.1
4,822,886	-		DZA65_RS22295	0.31	-0.2
4,822,886	-		DZA65_RS22295	0.31	+0.1
4,822,886	-		DZA65_RS22295	0.31	-0.4
4,823,054	-		DZA65_RS22295	0.49	-0.0
4,823,054	-		DZA65_RS22295	0.49	+0.3
4,823,056	+		DZA65_RS22295	0.49	+0.6
4,823,056	+		DZA65_RS22295	0.49	+0.3
4,823,057	-		DZA65_RS22295	0.50	+2.0
4,823,079	-		DZA65_RS22295	0.52	+0.6
4,823,114	+		DZA65_RS22295	0.56	+0.6
4,823,115	-		DZA65_RS22295	0.56	-0.9
4,823,131	+		DZA65_RS22295	0.57	+0.3
4,823,157	+		DZA65_RS22295	0.60	-0.6
4,823,158	-		DZA65_RS22295	0.60	-0.2
4,823,169	-		DZA65_RS22295	0.62	-0.5
4,823,194	+		DZA65_RS22295	0.64	+2.6
4,823,194	+		DZA65_RS22295	0.64	-0.8
4,823,195	-		DZA65_RS22295	0.64	+0.8
4,823,311	+		DZA65_RS22295	0.77	+0.1
4,823,311	+		DZA65_RS22295	0.77	-0.4
4,823,312	-		DZA65_RS22295	0.77	+0.5
4,823,312	-		DZA65_RS22295	0.77	+1.1
4,823,312	-		DZA65_RS22295	0.77	-0.6
4,823,312	-		DZA65_RS22295	0.77	-1.5
4,823,347	+		DZA65_RS22295	0.81	-0.1
4,823,347	+		DZA65_RS22295	0.81	+0.7
4,823,347	+		DZA65_RS22295	0.81	+0.8
4,823,348	-		DZA65_RS22295	0.81	-0.0
4,823,348	-		DZA65_RS22295	0.81	+0.3
4,823,348	-		DZA65_RS22295	0.81	+0.8
4,823,348	-		DZA65_RS22295	0.81	+0.4
4,823,421	+		DZA65_RS22295	0.89	+0.7
4,823,421	+		DZA65_RS22295	0.89	-0.0
4,823,421	+		DZA65_RS22295	0.89	-0.3
4,823,421	+		DZA65_RS22295	0.89	+1.2
4,823,421	+		DZA65_RS22295	0.89	+0.8
4,823,421	+		DZA65_RS22295	0.89	+0.8
4,823,421	+		DZA65_RS22295	0.89	+0.3
4,823,421	+		DZA65_RS22295	0.89	+1.2
4,823,422	-		DZA65_RS22295	0.89	+0.1
4,823,422	-		DZA65_RS22295	0.89	-0.2
4,823,422	-		DZA65_RS22295	0.89	+0.5
4,823,422	-		DZA65_RS22295	0.89	-0.0
4,823,422	-		DZA65_RS22295	0.89	-0.4
4,823,422	-		DZA65_RS22295	0.89	+0.4
4,823,422	-		DZA65_RS22295	0.89	-0.4
4,823,422	-		DZA65_RS22295	0.89	+0.7
4,823,422	-		DZA65_RS22295	0.89	-0.2
4,823,422	-		DZA65_RS22295	0.89	-0.6
4,823,422	-		DZA65_RS22295	0.89	-0.0
4,823,422	-		DZA65_RS22295	0.89	-0.2
4,823,422	-		DZA65_RS22295	0.89	-0.4
4,823,422	-		DZA65_RS22295	0.89	-0.3
4,823,422	-		DZA65_RS22295	0.89	+0.8
4,823,428	+		DZA65_RS22295	0.90	+0.9
4,823,471	+				+1.0
4,823,471	+				+1.2
4,823,471	+				+0.1
4,823,472	-				+2.1
4,823,472	-				+1.0
4,823,472	-				+0.3
4,823,476	+				+2.5
4,823,476	+				+0.8
4,823,476	+				-0.1
4,823,476	+				+0.8
4,823,476	+				+1.3
4,823,476	+				-0.0
4,823,476	+				+1.6
4,823,477	-				-0.2
4,823,488	+				+1.1
4,823,488	+				+0.8
4,823,488	+				-0.7
4,823,488	+				+2.2
4,823,488	+				+1.5
4,823,488	+				+0.4
4,823,488	+				+0.5
4,823,489	-				+0.3
4,823,489	-				-1.3
4,823,489	-				+0.0
4,823,489	-				+0.2
4,823,491	+				+0.9
4,823,491	+				+0.8
4,823,491	+				+0.3
4,823,491	+				+0.5
4,823,491	+				+0.8
4,823,491	+				+1.9
4,823,491	+				+0.5
4,823,491	+				-0.2
4,823,491	+				+0.5
4,823,491	+				+0.6
4,823,491	+				-0.7
4,823,491	+				+0.2
4,823,492	-				-2.2
4,823,492	-				-0.0
4,823,492	-				-0.2
4,823,492	-				+0.1
4,823,492	-				-0.3
4,823,492	-				-0.8
4,823,492	-				+0.4
4,823,492	-				-0.4
4,823,492	-				-1.0
4,823,492	-				+2.4
4,823,492	-				+0.8
4,823,492	-				-0.3
4,823,492	-				-0.3
4,823,492	-				+0.5
4,823,492	-				+0.5
4,823,525	+				+0.7
4,823,526	-				-0.0
4,823,548	-				+0.1
4,823,577	-				-1.2
4,823,593	+				+0.0
4,823,593	+				+0.8
4,823,593	+				+1.2
4,823,593	+				-0.7
4,823,593	+				+1.5
4,823,594	-				-2.2
4,823,609	+				+0.7
4,823,609	+				+0.7
4,823,610	-				-1.0
4,823,653	+				+0.8
4,823,654	-				+0.5
4,823,752	+		DZA65_RS22300	0.16	+0.1
4,823,752	+		DZA65_RS22300	0.16	+0.8
4,823,752	+		DZA65_RS22300	0.16	+1.8
4,823,753	-		DZA65_RS22300	0.16	+0.5
4,823,753	-		DZA65_RS22300	0.16	+0.5
4,823,791	+		DZA65_RS22300	0.21	+0.7
4,823,791	+		DZA65_RS22300	0.21	+1.8
4,823,791	+		DZA65_RS22300	0.21	-0.5
4,823,792	-		DZA65_RS22300	0.21	+0.1
4,823,874	+		DZA65_RS22300	0.30	+0.3
4,823,985	+		DZA65_RS22300	0.42	+0.2
4,823,985	+		DZA65_RS22300	0.42	-1.0
4,823,985	+		DZA65_RS22300	0.42	+0.4
4,823,985	+		DZA65_RS22300	0.42	+0.6
4,823,985	+				+1.6
4,823,986	-		DZA65_RS22300	0.42	-2.3
4,824,129	+		DZA65_RS22300	0.58	+0.6
4,824,207	+		DZA65_RS22300	0.67	+0.4
4,824,207	+		DZA65_RS22300	0.67	-0.6
4,824,207	+		DZA65_RS22300	0.67	+0.5
4,824,207	+		DZA65_RS22300	0.67	-0.1
4,824,207	+		DZA65_RS22300	0.67	+1.5
4,824,207	+		DZA65_RS22300	0.67	+3.3
4,824,208	-		DZA65_RS22300	0.67	-1.5
4,824,208	-		DZA65_RS22300	0.67	-0.2
4,824,211	+		DZA65_RS22300	0.68	+1.9
4,824,301	-		DZA65_RS22300	0.78	+0.3
4,824,301	-		DZA65_RS22300	0.78	-0.6
4,824,301	-		DZA65_RS22300	0.78	+0.1
4,824,301	-		DZA65_RS22300	0.78	-0.2
4,824,301	-		DZA65_RS22300	0.78	+0.6
4,824,329	+		DZA65_RS22300	0.81	-0.0
4,824,329	+		DZA65_RS22300	0.81	+0.1
4,824,329	+		DZA65_RS22300	0.81	+0.9
4,824,329	+		DZA65_RS22300	0.81	+2.0
4,824,329	+		DZA65_RS22300	0.81	+1.7
4,824,329	+		DZA65_RS22300	0.81	-0.0
4,824,329	+		DZA65_RS22300	0.81	-0.5
4,824,330	-		DZA65_RS22300	0.81	-0.9
4,824,387	+		DZA65_RS22300	0.87	+0.8
4,824,388	-		DZA65_RS22300	0.88	-0.3
4,824,418	-				+0.0
4,824,477	+				+1.6
4,824,477	+				+2.6
4,824,477	+				+1.6
4,824,477	+				+0.6
4,824,477	+				+0.4
4,824,477	+				+1.2
4,824,477	+				+0.5
4,824,477	+				+1.6
4,824,477	+				+0.7
4,824,477	+				+1.5
4,824,477	+				+1.5
4,824,477	+				+0.5
4,824,477	+				+2.4
4,824,477	+				-0.1
4,824,477	+				+0.6
4,824,477	+				+0.8
4,824,477	+				+1.1
4,824,477	+				+3.2
4,824,478	-				+0.3
4,824,478	-				-0.3
4,824,478	-				-2.4
4,824,478	-				-1.0
4,824,478	-				-1.2
4,824,478	-				+0.1
4,824,478	-				-0.4
4,824,481	+				-0.2
4,824,481	+				+0.6
4,824,481	+				+0.4
4,824,481	+				+1.6
4,824,481	+				+0.9
4,824,481	+				+0.4
4,824,481	+				+1.7
4,824,481	+				+1.6
4,824,481	+				+1.1
4,824,481	+				+0.9
4,824,481	+				+1.3
4,824,481	+				-2.1
4,824,481	+				+1.6
4,824,482	-				-0.6
4,824,482	-				-2.2
4,824,482	-				-0.1
4,824,482	-				+0.6
4,824,482	-				-0.0
4,824,482	-				-0.1
4,824,482	-				-0.3
4,824,482	-				-0.7
4,824,482	-				-0.2
4,824,482	-				-0.7
4,824,482	-				-0.4
4,824,498	+				+0.7
4,824,526	+				-1.3
4,824,527	-				-0.3
4,824,527	-				+2.9
4,824,527	-				+0.3
4,824,530	+				+0.3
4,824,530	+				-0.2
4,824,530	+				-0.3
4,824,530	+				+0.5
4,824,531	-				-0.1
4,824,531	-				-1.6
4,824,542	+				-0.1
4,824,542	+				+1.3
4,824,542	+				+1.1
4,824,542	+				-0.9
4,824,542	+				+0.5
4,824,543	-				-1.6
4,824,543	-				+0.3
4,824,543	-				-1.0
4,824,543	-				+0.4
4,824,546	+				+1.2
4,824,547	-				-0.2
4,824,547	-				-0.2
4,824,547	-				-0.6
4,824,547	-				+1.2
4,824,566	+				+0.8
4,824,567	-				-1.5
4,824,592	+				-0.3
4,824,592	+				+1.6
4,824,592	+				+0.7
4,824,592	+				+1.3
4,824,592	+				+0.2
4,824,592	+				-0.0
4,824,593	-				-0.8
4,824,593	-				-0.2
4,824,593	-				+0.4
4,824,593	-				+0.0
4,824,595	+				-2.0
4,824,595	+				+1.1
4,824,595	+				-0.1
4,824,595	+				-1.2
4,824,595	+				+0.1
4,824,595	+				+1.3
4,824,595	+				-0.7
4,824,596	-				-0.3
4,824,596	-				-1.2
4,824,596	-				+2.4
4,824,596	-				+0.3
4,824,609	+				+0.8
4,824,609	+				+2.1
4,824,617	+				+1.4
4,824,617	+				+0.2
4,824,617	+				+1.1
4,824,617	+				-0.5
4,824,618	-				-2.0
4,824,618	-				+0.0
4,824,618	-				-0.5
4,824,618	-				+0.3
4,824,618	-				-0.4
4,824,618	-				-0.1
4,824,618	-				-0.9
4,824,618	-				+0.4
4,824,657	+		DZA65_RS22305	0.14	+0.2
4,824,736	+		DZA65_RS22305	0.22	-0.7
4,824,789	-		DZA65_RS22305	0.27	-1.2
4,824,789	-		DZA65_RS22305	0.27	+0.4
4,824,823	+		DZA65_RS22305	0.31	-0.4
4,824,823	+		DZA65_RS22305	0.31	+0.9
4,824,824	-		DZA65_RS22305	0.31	-1.2
4,824,824	-		DZA65_RS22305	0.31	+0.0
4,824,824	-		DZA65_RS22305	0.31	-1.2
4,824,824	-		DZA65_RS22305	0.31	-0.8
4,824,842	+		DZA65_RS22305	0.33	-0.5
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4,825,064	-				+0.8
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4,825,064	-		DZA65_RS22305	0.56	-1.1
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4,825,422	+				+0.4
4,825,478	+				-0.6
4,825,479	-				-0.3
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4,825,479	-				+1.9