Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18795

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,050,327	+		DZA65_RS18780	0.76	-0.9
4,050,327	+		DZA65_RS18780	0.76	-0.4
4,050,327	+		DZA65_RS18780	0.76	+0.5
4,050,327	+		DZA65_RS18780	0.76	-0.2
4,050,327	+		DZA65_RS18780	0.76	+0.9
4,050,328	-		DZA65_RS18780	0.76	-0.5
4,050,328	-		DZA65_RS18780	0.76	+0.3
4,050,328	-		DZA65_RS18780	0.76	+0.7
4,050,328	-		DZA65_RS18780	0.76	+0.1
4,050,328	-		DZA65_RS18780	0.76	-2.1
4,050,328	-		DZA65_RS18780	0.76	-0.3
4,050,336	+		DZA65_RS18780	0.78	-0.3
4,050,436	-				-1.3
4,050,465	+				-0.3
4,050,465	+				-1.0
4,050,465	+				-0.3
4,050,465	+				-0.9
4,050,465	+				+0.9
4,050,465	+				+2.0
4,050,465	+				+0.7
4,050,465	+				-0.5
4,050,465	+				+0.7
4,050,465	+				+0.5
4,050,465	+				-0.2
4,050,465	+				+1.7
4,050,465	+				+1.7
4,050,465	+				-0.1
4,050,465	+				-0.1
4,050,465	+				-0.9
4,050,465	+				+1.7
4,050,466	-				-0.3
4,050,466	-				+1.2
4,050,466	-				+0.6
4,050,466	-				+0.3
4,050,466	-				+0.3
4,050,466	-				+1.2
4,050,466	-				-1.3
4,050,466	-				+0.4
4,050,466	-				+0.8
4,050,471	+				-1.3
4,050,471	+				-0.6
4,050,472	-				-0.1
4,050,472	-				+0.7
4,050,472	-				+0.2
4,050,472	-				-0.9
4,050,472	-				+1.3
4,050,472	-				-1.2
4,050,488	+		DZA65_RS18785	0.16	-3.0
4,050,488	+		DZA65_RS18785	0.16	+2.8
4,050,489	-		DZA65_RS18785	0.17	+1.2
4,050,489	-				+0.7
4,050,749	+		DZA65_RS18790	0.14	+0.2
4,050,749	+		DZA65_RS18790	0.14	+0.7
4,050,750	-		DZA65_RS18790	0.15	+0.0
4,050,750	-		DZA65_RS18790	0.15	+0.7
4,050,818	+		DZA65_RS18790	0.25	-0.6
4,050,818	+		DZA65_RS18790	0.25	-0.9
4,050,819	-		DZA65_RS18790	0.25	-0.1
4,050,819	-		DZA65_RS18790	0.25	+0.2
4,050,819	-		DZA65_RS18790	0.25	+1.1
4,050,819	-		DZA65_RS18790	0.25	+0.4
4,050,819	-		DZA65_RS18790	0.25	+0.3
4,050,819	-		DZA65_RS18790	0.25	+0.7
4,050,930	-		DZA65_RS18790	0.42	+0.4
4,050,930	-		DZA65_RS18790	0.42	+1.3
4,050,930	-		DZA65_RS18790	0.42	-0.4
4,050,935	+		DZA65_RS18790	0.43	-0.5
4,050,936	-		DZA65_RS18790	0.43	+1.3
4,051,088	+		DZA65_RS18790	0.67	+0.7
4,051,088	+		DZA65_RS18790	0.67	+1.3
4,051,088	+		DZA65_RS18790	0.67	+0.7
4,051,088	+		DZA65_RS18790	0.67	-0.4
4,051,088	+		DZA65_RS18790	0.67	+0.9
4,051,088	+		DZA65_RS18790	0.67	+1.2
4,051,088	+		DZA65_RS18790	0.67	+0.4
4,051,089	-		DZA65_RS18790	0.67	-0.5
4,051,089	-				-0.6
4,051,089	-		DZA65_RS18790	0.67	-0.3
4,051,089	-		DZA65_RS18790	0.67	+1.3
4,051,089	-		DZA65_RS18790	0.67	+0.3
4,051,158	+		DZA65_RS18790	0.77	-0.4
4,051,159	-		DZA65_RS18790	0.78	-0.1
4,051,200	-		DZA65_RS18790	0.84	+0.7
4,051,215	-		DZA65_RS18790	0.86	+1.4
4,051,215	-		DZA65_RS18790	0.86	+0.7
4,051,215	-		DZA65_RS18790	0.86	+1.7
4,051,217	+		DZA65_RS18790	0.87	-0.2
4,051,217	+		DZA65_RS18790	0.87	-0.3
4,051,217	+		DZA65_RS18790	0.87	-1.9
4,051,217	+		DZA65_RS18790	0.87	-0.6
4,051,217	+		DZA65_RS18790	0.87	-0.1
4,051,217	+		DZA65_RS18790	0.87	-0.9
4,051,218	-		DZA65_RS18790	0.87	+2.3
4,051,218	-		DZA65_RS18790	0.87	+1.2
4,051,218	-		DZA65_RS18790	0.87	+0.9
4,051,218	-		DZA65_RS18790	0.87	+1.5
4,051,218	-		DZA65_RS18790	0.87	+0.1
4,051,261	+				-1.1
4,051,261	+				-0.1
4,051,261	+				-1.6
4,051,261	+				+0.4
4,051,262	-				+2.6
4,051,262	-				+0.4
4,051,262	-				+0.9
4,051,262	-				+1.7
4,051,262	-				+0.7
4,051,262	-				+0.7
4,051,262	-				-0.3
4,051,283	+				-2.9
4,051,283	+				+0.8
4,051,284	-				+0.1
4,051,284	-				-0.6
4,051,284	-				+0.4
4,051,284	-				-0.9
4,051,284	-				+0.2
4,051,284	-				+1.8
4,051,284	-				-0.1
4,051,284	-				-1.3
4,051,284	-				-0.2
4,051,407	+				-0.4
4,051,408	-				+0.1
4,051,408	-				+0.3
4,051,408	-				-0.2
4,051,423	+				-0.1
4,051,424	-				+0.2
4,051,474	+				-1.1
4,051,569	+		DZA65_RS18795	0.14	+0.1
4,051,569	+		DZA65_RS18795	0.14	+0.6
4,051,569	+		DZA65_RS18795	0.14	+1.0
4,051,569	+		DZA65_RS18795	0.14	+1.9
4,051,569	+		DZA65_RS18795	0.14	-0.6
4,051,569	+		DZA65_RS18795	0.14	-0.5
4,051,570	-		DZA65_RS18795	0.14	-2.0
4,051,570	-		DZA65_RS18795	0.14	+1.3
4,051,570	-		DZA65_RS18795	0.14	+0.2
4,051,570	-		DZA65_RS18795	0.14	-0.7
4,051,691	+		DZA65_RS18795	0.21	-0.1
4,051,691	+				+0.1
4,051,691	+		DZA65_RS18795	0.21	+1.0
4,051,691	+		DZA65_RS18795	0.21	+0.1
4,051,691	+		DZA65_RS18795	0.21	+1.5
4,051,691	+		DZA65_RS18795	0.21	-0.0
4,051,691	+		DZA65_RS18795	0.21	+0.1
4,051,691	+		DZA65_RS18795	0.21	+0.5
4,051,692	-		DZA65_RS18795	0.21	+1.2
4,051,692	-		DZA65_RS18795	0.21	+0.7
4,051,692	-		DZA65_RS18795	0.21	-0.3
4,051,692	-		DZA65_RS18795	0.21	-0.3
4,051,692	-		DZA65_RS18795	0.21	-0.2
4,051,692	-		DZA65_RS18795	0.21	-0.3
4,051,692	-		DZA65_RS18795	0.21	-1.5
4,051,692	-		DZA65_RS18795	0.21	-0.6
4,051,692	-		DZA65_RS18795	0.21	+1.0
4,051,719	+		DZA65_RS18795	0.23	+1.3
4,051,732	+		DZA65_RS18795	0.23	+0.9
4,051,802	-		DZA65_RS18795	0.27	-0.5
4,051,857	+		DZA65_RS18795	0.30	-0.4
4,051,857	+		DZA65_RS18795	0.30	+1.0
4,051,858	-		DZA65_RS18795	0.30	+0.7
4,051,858	-		DZA65_RS18795	0.30	+0.1
4,051,928	+		DZA65_RS18795	0.34	+1.0
4,051,929	-		DZA65_RS18795	0.34	-0.6
4,051,981	+		DZA65_RS18795	0.37	+0.5
4,051,981	+		DZA65_RS18795	0.37	+0.0
4,051,982	-		DZA65_RS18795	0.37	+0.3
4,051,982	-		DZA65_RS18795	0.37	-0.3
4,051,982	-		DZA65_RS18795	0.37	+0.3
4,051,982	-		DZA65_RS18795	0.37	-0.3
4,052,297	+		DZA65_RS18795	0.55	+1.2
4,052,297	+		DZA65_RS18795	0.55	-0.1
4,052,297	+		DZA65_RS18795	0.55	-0.9
4,052,297	+		DZA65_RS18795	0.55	+0.1
4,052,298	-				-0.3
4,052,298	-		DZA65_RS18795	0.55	-0.7
4,052,298	-		DZA65_RS18795	0.55	-1.1
4,052,298	-		DZA65_RS18795	0.55	+0.5
4,052,298	-		DZA65_RS18795	0.55	-1.4
4,052,359	+		DZA65_RS18795	0.58	-1.6
4,052,445	+		DZA65_RS18795	0.63	+0.1
4,052,446	-		DZA65_RS18795	0.63	+0.1
4,052,446	-		DZA65_RS18795	0.63	+0.7
4,052,555	+		DZA65_RS18795	0.69	+0.9
4,052,555	+		DZA65_RS18795	0.69	-1.6
4,052,555	+		DZA65_RS18795	0.69	-0.1
4,052,556	-		DZA65_RS18795	0.69	-0.2
4,052,556	-		DZA65_RS18795	0.69	+0.5
4,052,556	-		DZA65_RS18795	0.69	+1.8
4,052,556	-		DZA65_RS18795	0.69	+0.7
4,052,556	-		DZA65_RS18795	0.69	-0.5
4,052,558	+		DZA65_RS18795	0.69	-2.5
4,052,558	+		DZA65_RS18795	0.69	+1.1
4,052,558	+		DZA65_RS18795	0.69	+0.7
4,052,558	+		DZA65_RS18795	0.69	-0.1
4,052,558	+		DZA65_RS18795	0.69	+0.3
4,052,558	+		DZA65_RS18795	0.69	-1.1
4,052,558	+		DZA65_RS18795	0.69	-1.2
4,052,559	-		DZA65_RS18795	0.69	-2.1
4,052,559	-		DZA65_RS18795	0.69	-2.1
4,052,559	-		DZA65_RS18795	0.69	-0.7
4,052,559	-		DZA65_RS18795	0.69	+1.0
4,052,559	-		DZA65_RS18795	0.69	+0.4
4,052,621	+		DZA65_RS18795	0.73	-0.2
4,052,621	+		DZA65_RS18795	0.73	-0.3
4,052,621	+		DZA65_RS18795	0.73	-0.5
4,052,666	+		DZA65_RS18795	0.75	+1.0
4,052,666	+		DZA65_RS18795	0.75	-0.5
4,052,667	-		DZA65_RS18795	0.75	+1.3
4,052,667	-		DZA65_RS18795	0.75	-0.1
4,052,838	+		DZA65_RS18795	0.85	+1.0
4,052,959	+				+2.5
4,052,959	+				-1.1
4,052,959	+				+0.5
4,052,959	+				-0.2
4,052,960	-				+1.0
4,053,104	+				-1.4
4,053,104	+				-1.3
4,053,104	+				-0.2
4,053,104	+				+0.2
4,053,104	+				-0.9
4,053,104	+				+0.7
4,053,104	+				-1.1
4,053,104	+				+1.3
4,053,105	-				-1.6
4,053,105	-				+0.9
4,053,105	-				+0.1
4,053,105	-				-1.9
4,053,105	-				-0.5
4,053,105	-				-1.3
4,053,105	-				+0.7
4,053,105	-				+0.1
4,053,105	-				-1.1
4,053,105	-				+0.7
4,053,105	-				-0.6
4,053,107	+				-0.1
4,053,108	-				+0.1
4,053,108	-				+0.7
4,053,108	-				+0.1
4,053,116	-				+1.3
4,053,130	+				+1.0
4,053,130	+				-1.9
4,053,130	+				-0.5
4,053,130	+				-0.7
4,053,130	+				+1.4
4,053,130	+				+0.0
4,053,130	+				-0.9
4,053,131	-				-0.6
4,053,131	-				+0.4
4,053,131	-				-0.1
4,053,131	-				-0.3
4,053,131	-				-2.1
4,053,131	-				+0.6
4,053,131	-				-2.1
4,053,131	-				+0.8
4,053,151	+				+1.3
4,053,151	+				+0.3
4,053,151	+				-0.9
4,053,151	+				+0.5
4,053,151	+				+0.7
4,053,151	+				-1.1
4,053,152	-				-0.2
4,053,152	-				-0.2
4,053,152	-				-0.3
4,053,152	-				-0.6
4,053,152	-				-0.9
4,053,152	-				+0.7
4,053,152	-				+1.0
4,053,152	-				+1.0
4,053,152	-				-1.2
4,053,310	+				+0.1
4,053,391	+				-1.1
4,053,391	+				+0.7
4,053,398	+				+0.6
4,053,430	+				-0.0
4,053,430	+				+0.0
4,053,430	+				+0.9
4,053,430	+				+1.7
4,053,430	+				+0.3
4,053,430	+				+0.0
4,053,430	+				+0.0
4,053,430	+				-2.5
4,053,430	+				-0.5
4,053,430	+				-1.3
4,053,430	+				+0.7
4,053,430	+				-0.6
4,053,430	+				-0.6
4,053,430	+				+0.1
4,053,430	+				+1.2
4,053,430	+				+2.3
4,053,430	+				+0.9
4,053,430	+				+0.2
4,053,430	+				+0.1
4,053,430	+				+0.1
4,053,430	+				-0.9
4,053,430	+				+1.6
4,053,430	+				-0.0
4,053,430	+				+0.2
4,053,430	+				-1.5
4,053,430	+				-1.0
4,053,430	+				+0.7
4,053,430	+				-1.1
4,053,430	+				+0.1
4,053,430	+				-0.6
4,053,430	+				-0.0
4,053,430	+				-2.1
4,053,430	+				+0.1
4,053,430	+				-0.2
4,053,430	+				-0.2
4,053,430	+				+0.3
4,053,430	+				-0.3
4,053,430	+				-0.0
4,053,430	+				+0.7
4,053,431	-				-0.1
4,053,431	-				+0.1
4,053,431	-				-1.3
4,053,431	-				+0.1
4,053,431	-				+1.5
4,053,431	-				-0.4
4,053,431	-				-0.7
4,053,431	-				-0.7
4,053,431	-				+1.4
4,053,431	-				+1.7
4,053,431	-				+0.5
4,053,431	-				+0.1
4,053,431	-				-1.2
4,053,431	-				+2.7
4,053,431	-				+0.4
4,053,431	-				-0.5
4,053,431	-				-0.3
4,053,431	-				-0.3
4,053,431	-				-0.6
4,053,431	-				-0.3
4,053,431	-				+1.1
4,053,431	-				-0.6
4,053,431	-				-1.3
4,053,431	-				-1.5
4,053,431	-				+0.4
4,053,431	-				-0.1
4,053,431	-				-0.4
4,053,431	-				+0.2
4,053,431	-				+0.5
4,053,431	-				+0.8
4,053,431	-				-0.3
4,053,431	-				-0.5
4,053,431	-				-0.5
4,053,431	-				-0.5
4,053,431	-				-0.5
4,053,431	-				+0.9
4,053,431	-				+0.5
4,053,436	+				-0.9
4,053,436	+				-1.8
4,053,436	+				-0.2
4,053,436	+				-0.7
4,053,436	+				-0.3
4,053,436	+				-0.8
4,053,436	+				+0.3
4,053,436	+				+0.4
4,053,436	+				-0.3
4,053,436	+				-1.9
4,053,437	-				-1.1
4,053,437	-				-0.1
4,053,437	-				+1.0
4,053,437	-				+0.1
4,053,437	-				+0.9
4,053,437	-				+1.0
4,053,437	-				-0.9
4,053,437	-				-0.9
4,053,437	-				-0.9
4,053,437	-				-0.4
4,053,437	-				-0.3
4,053,437	-				-2.8
4,053,437	-				-1.6
4,053,437	-				-0.7
4,053,437	-				-1.9
4,053,437	-				+0.5
4,053,437	-				-0.3
4,053,438	+				+0.7
4,053,475	+				+1.3
4,053,492	+				-1.6
4,053,492	+				+1.4
4,053,492	+				-0.1
4,053,492	+				+2.3
4,053,492	+				-3.6
4,053,492	+				+0.4
4,053,492	+				+1.1
4,053,493	-				-0.1
4,053,493	-				-0.1
4,053,493	-				+0.1
4,053,493	-				-1.3
4,053,493	-				-0.0
4,053,496	+				-1.1
4,053,496	+				+0.8
4,053,496	+				-0.6
4,053,496	+				-0.7
4,053,497	-				-1.0
4,053,497	-				-2.1
4,053,497	-				+1.4
4,053,525	+				-0.9
4,053,525	+				-0.9
4,053,526	-				+0.5
4,053,526	-				-1.6
4,053,526	-				-0.4
4,053,526	-				+0.5
4,053,526	-				-1.1
4,053,786	+				+0.7
4,053,786	+				+0.5
4,053,787	-				-1.9
4,053,787	-				+0.7
4,053,795	-				+0.7
4,053,795	-				+1.0
4,053,804	-				+1.2
4,053,810	-				-0.7
4,053,810	-				+0.4
4,053,960	+		DZA65_RS18810	0.39	-0.6
4,053,960	+		DZA65_RS18810	0.39	+0.3
4,053,961	-		DZA65_RS18810	0.39	-0.2
4,053,961	-		DZA65_RS18810	0.39	-0.6
4,053,962	-		DZA65_RS18810	0.39	+0.1
4,053,971	+		DZA65_RS18810	0.41	-0.2
4,053,972	-		DZA65_RS18810	0.41	-0.1