Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18245

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,933,601	-		DZA65_RS18240	0.69	+0.6
3,933,601	-		DZA65_RS18240	0.69	+0.6
3,933,603	-		DZA65_RS18240	0.69	-0.1
3,933,603	-		DZA65_RS18240	0.69	-1.2
3,933,603	-		DZA65_RS18240	0.69	+0.1
3,933,651	-		DZA65_RS18240	0.71	+1.5
3,933,728	+		DZA65_RS18240	0.74	+2.9
3,933,728	+		DZA65_RS18240	0.74	-1.4
3,933,728	+		DZA65_RS18240	0.74	-1.4
3,933,728	+		DZA65_RS18240	0.74	+0.1
3,933,728	+		DZA65_RS18240	0.74	-0.2
3,933,728	+		DZA65_RS18240	0.74	-0.5
3,933,728	+		DZA65_RS18240	0.74	-0.9
3,933,729	-		DZA65_RS18240	0.74	+1.8
3,933,729	-		DZA65_RS18240	0.74	-2.4
3,933,729	-		DZA65_RS18240	0.74	+2.2
3,933,729	-		DZA65_RS18240	0.74	-0.5
3,933,729	-		DZA65_RS18240	0.74	+0.9
3,933,729	-		DZA65_RS18240	0.74	+0.2
3,933,729	-		DZA65_RS18240	0.74	-0.2
3,933,729	-		DZA65_RS18240	0.74	-0.5
3,933,729	-		DZA65_RS18240	0.74	+0.3
3,933,746	+		DZA65_RS18240	0.74	+0.3
3,933,746	+		DZA65_RS18240	0.74	-0.7
3,933,746	+		DZA65_RS18240	0.74	+0.5
3,933,746	+		DZA65_RS18240	0.74	-2.0
3,933,746	+		DZA65_RS18240	0.74	+0.6
3,933,746	+		DZA65_RS18240	0.74	-1.4
3,933,747	-		DZA65_RS18240	0.74	-1.0
3,933,747	-		DZA65_RS18240	0.74	-0.7
3,933,879	+		DZA65_RS18240	0.79	+0.5
3,934,023	+		DZA65_RS18240	0.84	+0.4
3,934,023	+		DZA65_RS18240	0.84	+0.1
3,934,024	-		DZA65_RS18240	0.84	+1.1
3,934,024	-		DZA65_RS18240	0.84	+1.3
3,934,059	-		DZA65_RS18240	0.85	+0.0
3,934,059	-		DZA65_RS18240	0.85	+0.6
3,934,059	-		DZA65_RS18240	0.85	+0.2
3,934,087	+		DZA65_RS18240	0.86	-2.2
3,934,087	+		DZA65_RS18240	0.86	+0.7
3,934,087	+		DZA65_RS18240	0.86	-0.5
3,934,088	-		DZA65_RS18240	0.86	-0.7
3,934,088	-		DZA65_RS18240	0.86	-1.0
3,934,088	-		DZA65_RS18240	0.86	+0.6
3,934,131	+		DZA65_RS18240	0.88	+0.5
3,934,131	+		DZA65_RS18240	0.88	-1.0
3,934,205	-				-1.4
3,934,205	-				-0.4
3,934,438	+				-0.4
3,934,438	+				+2.5
3,934,438	+				-0.4
3,934,438	+				+0.6
3,934,439	-				-0.5
3,934,439	-				+0.2
3,934,439	-				-0.7
3,934,439	-				+1.6
3,934,439	-				-1.6
3,934,439	-				-0.6
3,934,439	-				-1.0
3,934,439	-				-1.0
3,934,439	-				+0.0
3,934,518	-				+0.6
3,934,540	+				-0.1
3,934,540	+				+0.1
3,934,540	+				+0.6
3,934,540	+				-1.0
3,934,541	-				+0.0
3,934,541	-				+0.6
3,934,593	+				+0.8
3,934,594	-				+0.4
3,934,594	-				-0.8
3,934,664	+				-1.2
3,934,666	+				+0.9
3,934,666	+				-1.7
3,934,666	+				-0.6
3,934,666	+				-3.2
3,934,666	+				+0.3
3,934,666	+				-0.4
3,934,666	+				+1.0
3,934,666	+				-2.1
3,934,667	-				+0.6
3,934,667	-				-0.5
3,934,667	-				+0.3
3,934,667	-				-0.3
3,934,726	-		DZA65_RS18245	0.10	+0.7
3,934,749	+		DZA65_RS18245	0.12	-0.4
3,934,812	+		DZA65_RS18245	0.17	-2.2
3,934,812	+		DZA65_RS18245	0.17	+0.1
3,934,813	-		DZA65_RS18245	0.17	+0.6
3,934,813	-		DZA65_RS18245	0.17	-0.4
3,934,813	-		DZA65_RS18245	0.17	+1.1
3,934,813	-		DZA65_RS18245	0.17	-0.1
3,934,831	+		DZA65_RS18245	0.18	-1.4
3,934,831	+		DZA65_RS18245	0.18	+0.6
3,934,831	+		DZA65_RS18245	0.18	-0.5
3,934,831	+		DZA65_RS18245	0.18	-0.4
3,934,831	+		DZA65_RS18245	0.18	-1.4
3,934,831	+		DZA65_RS18245	0.18	+0.3
3,934,831	+		DZA65_RS18245	0.18	-0.5
3,934,831	+		DZA65_RS18245	0.18	-1.8
3,934,831	+		DZA65_RS18245	0.18	+0.1
3,934,831	+		DZA65_RS18245	0.18	-0.8
3,934,832	-		DZA65_RS18245	0.18	-0.0
3,934,832	-		DZA65_RS18245	0.18	+0.4
3,934,832	-		DZA65_RS18245	0.18	-0.4
3,934,832	-		DZA65_RS18245	0.18	+1.1
3,934,832	-		DZA65_RS18245	0.18	-0.8
3,934,832	-		DZA65_RS18245	0.18	-0.4
3,934,832	-		DZA65_RS18245	0.18	-0.7
3,934,832	-		DZA65_RS18245	0.18	-1.7
3,934,935	+		DZA65_RS18245	0.26	-1.2
3,934,935	+		DZA65_RS18245	0.26	-2.0
3,934,936	-		DZA65_RS18245	0.26	-0.1
3,934,956	-		DZA65_RS18245	0.27	-0.4
3,934,992	+		DZA65_RS18245	0.30	+0.1
3,934,992	+		DZA65_RS18245	0.30	-2.2
3,934,992	+		DZA65_RS18245	0.30	+0.6
3,935,004	+		DZA65_RS18245	0.31	-0.8
3,935,004	+		DZA65_RS18245	0.31	-2.3
3,935,004	+		DZA65_RS18245	0.31	-0.4
3,935,015	-		DZA65_RS18245	0.32	-1.1
3,935,030	-		DZA65_RS18245	0.33	+1.0
3,935,196	+		DZA65_RS18245	0.45	+0.6
3,935,196	+		DZA65_RS18245	0.45	-1.4
3,935,196	+		DZA65_RS18245	0.45	+1.2
3,935,323	-				+1.6
3,935,357	+		DZA65_RS18245	0.57	+0.4
3,935,511	+		DZA65_RS18245	0.69	+0.6
3,935,512	-		DZA65_RS18245	0.69	-0.7
3,935,658	+		DZA65_RS18245	0.80	-2.2
3,935,658	+		DZA65_RS18245	0.80	-0.7
3,935,659	-		DZA65_RS18245	0.80	-2.4
3,935,659	-		DZA65_RS18245	0.80	+0.6
3,935,659	-		DZA65_RS18245	0.80	-1.0
3,935,675	+		DZA65_RS18245	0.81	-0.8
3,935,675	+		DZA65_RS18245	0.81	-0.1
3,935,676	-		DZA65_RS18245	0.81	+0.3
3,935,705	+		DZA65_RS18245	0.84	-0.7
3,935,705	+		DZA65_RS18245	0.84	-0.2
3,935,719	-		DZA65_RS18245	0.85	-0.4
3,935,752	+		DZA65_RS18245	0.87	-0.2
3,935,753	-		DZA65_RS18245	0.87	+0.1
3,935,769	+		DZA65_RS18245	0.88	-0.1
3,935,769	+		DZA65_RS18245	0.88	+1.2
3,935,770	-		DZA65_RS18245	0.88	-0.7
3,935,787	+		DZA65_RS18245	0.90	-0.7
3,935,788	-		DZA65_RS18245	0.90	-1.0
3,935,790	+				-0.2
3,935,790	+				-1.2
3,935,790	+				-1.6
3,935,790	+				-0.5
3,935,791	-				-0.2
3,935,791	-				+1.6
3,935,794	+				+0.1
3,935,794	+				-1.0
3,935,794	+				-1.7
3,935,896	+				-0.4
3,935,896	+				-0.1
3,935,897	-				-0.0
3,935,904	-				-0.2
3,935,923	+				+1.3
3,935,924	-				+1.6
3,935,924	-				+0.6
3,935,924	-				+0.9
3,935,924	-				+0.0
3,935,924	-				+0.6
3,935,924	-				-0.2
3,935,931	+				+0.0
3,935,931	+				-0.8
3,935,931	+				-0.4
3,935,931	+				+0.4
3,935,931	+				+1.8
3,935,932	-				-0.4
3,935,932	-				-0.7
3,935,932	-				-0.9
3,935,932	-				-0.8
3,935,961	+				-0.9
3,935,962	-				+1.1
3,935,974	-				-1.2
3,936,037	+				+0.9
3,936,037	+				+1.2
3,936,037	+				+2.2
3,936,037	+				-0.4
3,936,038	-				+1.3
3,936,038	-				+0.7
3,936,073	+				+0.1
3,936,075	+				-0.9
3,936,075	+				+1.1
3,936,075	+				+0.2
3,936,075	+				+1.1
3,936,075	+				-0.7
3,936,076	-				+3.8
3,936,076	-				+0.6
3,936,076	-				-0.8
3,936,076	-				+2.2
3,936,076	-				-0.8
3,936,076	-				+0.6
3,936,076	-				-1.3
3,936,115	-				-0.4
3,936,128	+				+0.2
3,936,142	+				+0.6
3,936,142	+				-3.5
3,936,142	+				-2.4
3,936,142	+				+1.2
3,936,142	+				-2.0
3,936,142	+				-0.3
3,936,143	-				-0.2
3,936,143	-				+0.1
3,936,217	-				+1.4
3,936,310	+		DZA65_RS18250	0.13	+0.2
3,936,311	-		DZA65_RS18250	0.13	-1.3
3,936,311	-		DZA65_RS18250	0.13	-1.4
3,936,361	+		DZA65_RS18250	0.21	+0.1
3,936,362	-		DZA65_RS18250	0.21	+0.6
3,936,367	-		DZA65_RS18250	0.22	-0.7
3,936,552	+		DZA65_RS18250	0.52	-0.5
3,936,552	+		DZA65_RS18250	0.52	-0.1
3,936,552	+		DZA65_RS18250	0.52	-0.7
3,936,553	-		DZA65_RS18250	0.52	+0.1
3,936,553	-		DZA65_RS18250	0.52	+0.3
3,936,635	+		DZA65_RS18250	0.66	-0.6
3,936,635	+		DZA65_RS18250	0.66	+1.0
3,936,636	-		DZA65_RS18250	0.66	-1.6
3,936,695	+		DZA65_RS18250	0.75	-1.4
3,936,695	+		DZA65_RS18250	0.75	-0.2
3,936,695	+		DZA65_RS18250	0.75	+0.2
3,936,710	+		DZA65_RS18250	0.78	+1.4
3,936,710	+		DZA65_RS18250	0.78	+0.4
3,936,710	+		DZA65_RS18250	0.78	+0.9
3,936,710	+		DZA65_RS18250	0.78	-1.0
3,936,710	+		DZA65_RS18250	0.78	+1.6
3,936,710	+		DZA65_RS18250	0.78	+0.2
3,936,710	+		DZA65_RS18250	0.78	+0.7
3,936,711	-		DZA65_RS18250	0.78	+0.8
3,936,711	-		DZA65_RS18250	0.78	+1.1
3,936,711	-		DZA65_RS18250	0.78	-1.7
3,936,711	-		DZA65_RS18250	0.78	-0.6
3,936,711	-		DZA65_RS18250	0.78	+0.3
3,936,711	-		DZA65_RS18250	0.78	-2.2
3,936,711	-		DZA65_RS18250	0.78	+1.0
3,936,727	-		DZA65_RS18250	0.80	-0.1
3,936,727	-		DZA65_RS18250	0.80	-0.0
3,936,747	+		DZA65_RS18250	0.84	-1.0
3,936,747	+		DZA65_RS18250	0.84	-1.7
3,936,747	+		DZA65_RS18250	0.84	+0.2
3,936,747	+		DZA65_RS18250	0.84	-1.0
3,936,747	+		DZA65_RS18250	0.84	+0.9
3,936,748	-		DZA65_RS18250	0.84	+0.9
3,936,748	-		DZA65_RS18250	0.84	-0.4
3,936,748	-		DZA65_RS18250	0.84	-0.7
3,936,748	-		DZA65_RS18250	0.84	+0.6
3,936,748	-		DZA65_RS18250	0.84	-0.4
3,936,748	-		DZA65_RS18250	0.84	-1.6
3,936,752	-		DZA65_RS18250	0.85	-0.6
3,936,752	-		DZA65_RS18250	0.85	-0.4
3,936,844	+				+0.7
3,936,901	+				-0.3
3,936,902	-				-0.9
3,936,902	-				+1.8
3,936,902	-				+2.8