Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17820

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,834,147	+		DZA65_RS17810	0.53	+0.9
3,834,290	+		DZA65_RS17810	0.75	+0.6
3,834,291	-		DZA65_RS17810	0.75	+0.7
3,834,291	-		DZA65_RS17810	0.75	+1.0
3,834,291	-		DZA65_RS17810	0.75	-0.4
3,834,291	-		DZA65_RS17810	0.75	-0.1
3,834,291	-		DZA65_RS17810	0.75	-0.3
3,834,432	+				+2.7
3,834,530	-		DZA65_RS17815	0.11	-1.0
3,834,530	-		DZA65_RS17815	0.11	-0.0
3,834,530	-		DZA65_RS17815	0.11	-0.4
3,834,530	-		DZA65_RS17815	0.11	-1.0
3,834,530	-		DZA65_RS17815	0.11	-1.3
3,834,530	-		DZA65_RS17815	0.11	-0.6
3,834,550	+		DZA65_RS17815	0.14	+0.2
3,834,550	+		DZA65_RS17815	0.14	-0.4
3,834,550	+		DZA65_RS17815	0.14	+1.0
3,834,550	+		DZA65_RS17815	0.14	-0.8
3,834,550	+		DZA65_RS17815	0.14	+0.2
3,834,550	+		DZA65_RS17815	0.14	-0.4
3,834,550	+		DZA65_RS17815	0.14	-0.4
3,834,550	+		DZA65_RS17815	0.14	-0.8
3,834,550	+		DZA65_RS17815	0.14	+0.1
3,834,550	+		DZA65_RS17815	0.14	-1.0
3,834,550	+		DZA65_RS17815	0.14	+0.7
3,834,550	+		DZA65_RS17815	0.14	-0.3
3,834,551	-		DZA65_RS17815	0.14	-0.2
3,834,551	-		DZA65_RS17815	0.14	+0.4
3,834,551	-		DZA65_RS17815	0.14	-0.4
3,834,551	-		DZA65_RS17815	0.14	-1.4
3,834,551	-		DZA65_RS17815	0.14	-0.0
3,834,551	-		DZA65_RS17815	0.14	-0.2
3,834,585	+		DZA65_RS17815	0.19	-0.7
3,834,585	+		DZA65_RS17815	0.19	-2.0
3,834,586	-		DZA65_RS17815	0.20	-0.8
3,834,717	-		DZA65_RS17815	0.39	+0.2
3,834,811	+		DZA65_RS17815	0.53	+0.0
3,834,811	+		DZA65_RS17815	0.53	-1.0
3,834,811	+		DZA65_RS17815	0.53	+0.4
3,834,811	+		DZA65_RS17815	0.53	+0.4
3,834,811	+		DZA65_RS17815	0.53	-0.9
3,834,812	-		DZA65_RS17815	0.53	-1.0
3,834,923	+		DZA65_RS17815	0.70	+1.4
3,834,923	+		DZA65_RS17815	0.70	+0.1
3,834,923	+		DZA65_RS17815	0.70	+0.0
3,834,943	+		DZA65_RS17815	0.73	+0.8
3,834,943	+		DZA65_RS17815	0.73	-0.8
3,834,943	+		DZA65_RS17815	0.73	+0.1
3,834,944	-		DZA65_RS17815	0.73	-1.8
3,834,944	-		DZA65_RS17815	0.73	+0.0
3,834,944	-		DZA65_RS17815	0.73	-0.8
3,835,072	-				-1.4
3,835,114	+				-0.4
3,835,114	+				+0.5
3,835,114	+				-0.4
3,835,114	+				-0.2
3,835,114	+				-0.9
3,835,115	-				-1.4
3,835,115	-				-0.4
3,835,115	-				+0.0
3,835,115	-				+1.1
3,835,132	+				+0.1
3,835,132	+				-1.3
3,835,270	+		DZA65_RS17820	0.18	-1.0
3,835,270	+		DZA65_RS17820	0.18	-1.4
3,835,270	+		DZA65_RS17820	0.18	+0.9
3,835,271	-		DZA65_RS17820	0.18	+1.1
3,835,271	-		DZA65_RS17820	0.18	+0.6
3,835,271	-		DZA65_RS17820	0.18	+0.2
3,835,271	-		DZA65_RS17820	0.18	-0.4
3,835,271	-		DZA65_RS17820	0.18	+0.1
3,835,364	+		DZA65_RS17820	0.29	-1.0
3,835,366	+		DZA65_RS17820	0.30	+2.9
3,835,366	+		DZA65_RS17820	0.30	-0.8
3,835,366	+		DZA65_RS17820	0.30	-0.2
3,835,366	+		DZA65_RS17820	0.30	-0.2
3,835,366	+		DZA65_RS17820	0.30	+0.0
3,835,366	+		DZA65_RS17820	0.30	+0.4
3,835,366	+		DZA65_RS17820	0.30	-0.5
3,835,366	+		DZA65_RS17820	0.30	-0.5
3,835,366	+		DZA65_RS17820	0.30	+1.5
3,835,366	+		DZA65_RS17820	0.30	+0.9
3,835,366	+		DZA65_RS17820	0.30	+0.8
3,835,366	+		DZA65_RS17820	0.30	-2.8
3,835,367	-		DZA65_RS17820	0.30	+0.3
3,835,367	-		DZA65_RS17820	0.30	+0.2
3,835,367	-		DZA65_RS17820	0.30	+0.1
3,835,367	-		DZA65_RS17820	0.30	-0.2
3,835,367	-		DZA65_RS17820	0.30	+0.2
3,835,367	-		DZA65_RS17820	0.30	+1.0
3,835,367	-		DZA65_RS17820	0.30	+0.6
3,835,367	-		DZA65_RS17820	0.30	-0.0
3,835,367	-		DZA65_RS17820	0.30	-1.3
3,835,367	-		DZA65_RS17820	0.30	-0.0
3,835,387	+		DZA65_RS17820	0.32	+1.4
3,835,387	+		DZA65_RS17820	0.32	+1.3
3,835,388	-		DZA65_RS17820	0.32	-0.4
3,835,417	+		DZA65_RS17820	0.36	+0.6
3,835,417	+		DZA65_RS17820	0.36	+0.6
3,835,499	+		DZA65_RS17820	0.46	+0.1
3,835,548	+		DZA65_RS17820	0.53	+0.4
3,835,570	+		DZA65_RS17820	0.55	+0.1
3,835,657	+		DZA65_RS17820	0.66	+0.9
3,835,657	+		DZA65_RS17820	0.66	+0.6
3,835,657	+		DZA65_RS17820	0.66	+1.2
3,835,723	+		DZA65_RS17820	0.75	-2.8
3,835,723	+		DZA65_RS17820	0.75	+0.8
3,835,723	+		DZA65_RS17820	0.75	+0.9
3,835,724	-		DZA65_RS17820	0.75	+0.4
3,835,724	-		DZA65_RS17820	0.75	-0.4
3,835,744	+		DZA65_RS17820	0.77	-0.3
3,835,939	-				-0.1
3,836,142	+				+0.9
3,836,142	+				-1.6
3,836,143	-				+0.7
3,836,229	+				+0.6
3,836,230	-				-0.1
3,836,230	-				-0.1
3,836,242	+				-0.4
3,836,243	-				+1.1
3,836,328	+		DZA65_RS17825	0.15	+0.3
3,836,328	+		DZA65_RS17825	0.15	-1.2
3,836,328	+		DZA65_RS17825	0.15	-1.0
3,836,329	-		DZA65_RS17825	0.16	-0.8
3,836,329	-		DZA65_RS17825	0.16	-0.9
3,836,395	+		DZA65_RS17825	0.23	-0.2
3,836,464	+		DZA65_RS17825	0.32	+0.5
3,836,464	+		DZA65_RS17825	0.32	-2.0
3,836,464	+		DZA65_RS17825	0.32	-0.9
3,836,464	+		DZA65_RS17825	0.32	-2.0
3,836,464	+		DZA65_RS17825	0.32	+1.5
3,836,465	-		DZA65_RS17825	0.32	+0.4
3,836,465	-		DZA65_RS17825	0.32	-0.2
3,836,465	-		DZA65_RS17825	0.32	-1.0
3,836,465	-		DZA65_RS17825	0.32	+0.8
3,836,622	+		DZA65_RS17825	0.50	+0.8
3,836,622	+		DZA65_RS17825	0.50	-0.9
3,836,702	+		DZA65_RS17825	0.60	-0.2
3,836,703	-		DZA65_RS17825	0.60	+0.4
3,836,703	-		DZA65_RS17825	0.60	-0.4
3,836,703	-		DZA65_RS17825	0.60	-1.4
3,836,743	+		DZA65_RS17825	0.65	-1.2
3,836,743	+		DZA65_RS17825	0.65	+0.3
3,836,743	+		DZA65_RS17825	0.65	+1.9
3,836,743	+		DZA65_RS17825	0.65	-1.0
3,836,743	+		DZA65_RS17825	0.65	-1.0
3,836,743	+		DZA65_RS17825	0.65	-0.0
3,836,743	+		DZA65_RS17825	0.65	-0.7
3,836,743	+		DZA65_RS17825	0.65	+0.7
3,836,743	+		DZA65_RS17825	0.65	-0.8
3,836,743	+		DZA65_RS17825	0.65	+0.6
3,836,743	+		DZA65_RS17825	0.65	-3.3
3,836,743	+		DZA65_RS17825	0.65	-0.4
3,836,743	+		DZA65_RS17825	0.65	+0.6
3,836,743	+		DZA65_RS17825	0.65	-0.4
3,836,743	+		DZA65_RS17825	0.65	-0.3
3,836,744	-		DZA65_RS17825	0.65	-0.3
3,836,744	-		DZA65_RS17825	0.65	+0.0
3,836,744	-		DZA65_RS17825	0.65	+0.6
3,836,744	-		DZA65_RS17825	0.65	+0.2
3,836,744	-		DZA65_RS17825	0.65	-1.1
3,836,744	-				-1.0
3,836,744	-		DZA65_RS17825	0.65	+0.7
3,836,744	-		DZA65_RS17825	0.65	-0.9
3,836,745	+		DZA65_RS17825	0.65	+0.2
3,836,745	+		DZA65_RS17825	0.65	+0.9
3,836,745	+		DZA65_RS17825	0.65	-0.6
3,836,745	+		DZA65_RS17825	0.65	+0.3
3,836,745	+		DZA65_RS17825	0.65	+1.0
3,836,745	+		DZA65_RS17825	0.65	+0.6
3,836,745	+		DZA65_RS17825	0.65	-0.2
3,836,746	-		DZA65_RS17825	0.65	-0.9
3,836,746	-		DZA65_RS17825	0.65	-0.9