Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17785

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,827,707	+				-0.8
3,827,707	+				-1.3
3,827,707	+				-1.0
3,827,708	-				+1.7
3,827,708	-				-0.4
3,827,708	-				+0.8
3,827,718	+				-0.4
3,827,841	+		DZA65_RS17780	0.13	-1.5
3,827,841	+		DZA65_RS17780	0.13	-0.4
3,827,841	+		DZA65_RS17780	0.13	-0.1
3,827,841	+		DZA65_RS17780	0.13	+0.6
3,827,841	+		DZA65_RS17780	0.13	-0.2
3,827,841	+		DZA65_RS17780	0.13	-1.0
3,827,841	+		DZA65_RS17780	0.13	-0.9
3,827,841	+		DZA65_RS17780	0.13	-0.0
3,827,842	-		DZA65_RS17780	0.13	+0.1
3,827,842	-		DZA65_RS17780	0.13	+0.6
3,827,842	-		DZA65_RS17780	0.13	-0.4
3,827,842	-		DZA65_RS17780	0.13	+0.6
3,827,842	-		DZA65_RS17780	0.13	-0.1
3,827,842	-		DZA65_RS17780	0.13	-0.0
3,827,860	+		DZA65_RS17780	0.16	+1.2
3,827,861	-		DZA65_RS17780	0.16	+0.7
3,827,861	-		DZA65_RS17780	0.16	+0.0
3,827,993	+		DZA65_RS17780	0.38	-1.1
3,827,994	-		DZA65_RS17780	0.38	-2.3
3,828,128	-		DZA65_RS17780	0.60	-1.8
3,828,137	+		DZA65_RS17780	0.61	-0.3
3,828,137	+		DZA65_RS17780	0.61	+0.6
3,828,137	+		DZA65_RS17780	0.61	+0.9
3,828,137	+		DZA65_RS17780	0.61	-1.1
3,828,137	+		DZA65_RS17780	0.61	-0.4
3,828,137	+		DZA65_RS17780	0.61	-1.3
3,828,137	+		DZA65_RS17780	0.61	+0.6
3,828,137	+		DZA65_RS17780	0.61	-0.8
3,828,137	+		DZA65_RS17780	0.61	+0.1
3,828,137	+		DZA65_RS17780	0.61	-0.2
3,828,137	+		DZA65_RS17780	0.61	+0.4
3,828,137	+		DZA65_RS17780	0.61	-0.6
3,828,137	+		DZA65_RS17780	0.61	+0.3
3,828,137	+		DZA65_RS17780	0.61	-0.0
3,828,138	-		DZA65_RS17780	0.61	-1.1
3,828,138	-		DZA65_RS17780	0.61	-0.9
3,828,138	-		DZA65_RS17780	0.61	-0.6
3,828,138	-		DZA65_RS17780	0.61	+0.2
3,828,138	-		DZA65_RS17780	0.61	+0.6
3,828,138	-		DZA65_RS17780	0.61	+0.1
3,828,138	-		DZA65_RS17780	0.61	-0.4
3,828,138	-		DZA65_RS17780	0.61	-0.9
3,828,138	-		DZA65_RS17780	0.61	+0.1
3,828,251	+		DZA65_RS17780	0.80	+0.9
3,828,375	-				+0.4
3,828,375	-				-0.1
3,828,375	-				-1.4
3,828,375	-				-0.2
3,828,386	+				-0.0
3,828,386	+				+0.8
3,828,386	+				+0.9
3,828,386	+				+0.5
3,828,386	+				-0.5
3,828,387	-				+0.0
3,828,410	-				+0.8
3,828,449	+				-0.0
3,828,449	+				-0.6
3,828,449	+				-0.1
3,828,449	+				-0.4
3,828,450	-				+0.6
3,828,450	-				-1.4
3,828,450	-				+0.0
3,828,452	+				+0.8
3,828,452	+				+0.1
3,828,452	+				-0.9
3,828,452	+				+2.1
3,828,452	+				+0.8
3,828,452	+				-2.4
3,828,452	+				+1.8
3,828,452	+				+1.6
3,828,453	-				-2.0
3,828,453	-				-0.9
3,828,453	-				-1.4
3,828,453	-				-0.6
3,828,453	-				+0.6
3,828,453	-				+1.4
3,828,453	-				+0.9
3,828,453	-				-0.2
3,828,453	-				-0.1
3,828,458	+				-0.9
3,828,458	+				-0.0
3,828,458	+				+0.7
3,828,458	+				-1.4
3,828,459	-				+0.2
3,828,459	-				-0.0
3,828,459	-				-0.7
3,828,459	-				+0.1
3,828,459	-				+0.6
3,828,459	-				-0.0
3,828,459	-				-0.0
3,828,459	-				-0.4
3,828,462	+				+0.9
3,828,462	+				+0.1
3,828,462	+				-1.2
3,828,462	+				+0.3
3,828,535	+				-1.4
3,828,535	+				-1.8
3,828,535	+				+0.6
3,828,536	-				+0.7
3,828,536	-				-0.9
3,828,536	-				-0.3
3,828,536	-				+0.4
3,828,536	-				+0.0
3,828,536	-				+2.5
3,828,536	-				-0.2
3,828,537	+				-0.7
3,828,537	+				-0.0
3,828,537	+				+0.3
3,828,537	+				+0.8
3,828,537	+				-0.3
3,828,537	+				+1.1
3,828,537	+				+0.4
3,828,537	+				-0.1
3,828,537	+				+1.6
3,828,537	+				-1.8
3,828,537	+				-0.4
3,828,537	+				+0.3
3,828,538	-				-0.4
3,828,538	-				-0.6
3,828,538	-				+0.4
3,828,538	-				-1.4
3,828,538	-				+0.6
3,828,538	-				+0.0
3,828,538	-				-1.4
3,828,539	+				+1.6
3,828,539	+				+0.6
3,828,539	+				-0.4
3,828,539	+				-0.2
3,828,539	+				-0.9
3,828,539	+				-0.1
3,828,539	+				+0.6
3,828,539	+				-1.4
3,828,539	+				-0.1
3,828,539	+				+1.6
3,828,539	+				+0.3
3,828,539	+				+0.2
3,828,539	+				-0.1
3,828,539	+				-0.0
3,828,539	+				-0.2
3,828,539	+				+0.3
3,828,540	-				-0.3
3,828,540	-				-0.1
3,828,540	-				-1.0
3,828,540	-				-0.4
3,828,540	-				-1.4
3,828,540	-				+0.7
3,828,540	-				+0.6
3,828,540	-				-0.3
3,828,540	-				+1.7
3,828,540	-				-2.0
3,828,540	-				+1.3
3,828,540	-				-0.9
3,828,540	-				-0.6
3,828,540	-				+0.2
3,828,540	-				-0.2
3,828,540	-				-0.3
3,828,540	-				-0.2
3,828,540	-				-0.6
3,828,637	-				+0.1
3,828,673	-				-0.2
3,828,673	-				+1.6
3,828,673	-				-0.6
3,828,715	+		DZA65_RS17785	0.12	+0.1
3,828,716	-		DZA65_RS17785	0.12	-0.4
3,828,736	+		DZA65_RS17785	0.13	-0.2
3,828,763	+		DZA65_RS17785	0.16	-0.9
3,828,827	-		DZA65_RS17785	0.21	-0.4
3,828,950	-		DZA65_RS17785	0.32	+0.6
3,828,959	-		DZA65_RS17785	0.33	-0.4
3,828,959	-		DZA65_RS17785	0.33	-0.3
3,828,959	-		DZA65_RS17785	0.33	-1.0
3,829,168	+		DZA65_RS17785	0.51	+1.4
3,829,168	+		DZA65_RS17785	0.51	+0.2
3,829,168	+		DZA65_RS17785	0.51	+1.0
3,829,168	+		DZA65_RS17785	0.51	+2.0
3,829,168	+		DZA65_RS17785	0.51	+1.8
3,829,168	+		DZA65_RS17785	0.51	-0.8
3,829,168	+		DZA65_RS17785	0.51	-0.4
3,829,168	+		DZA65_RS17785	0.51	+0.2
3,829,168	+		DZA65_RS17785	0.51	-0.2
3,829,168	+		DZA65_RS17785	0.51	+2.1
3,829,168	+		DZA65_RS17785	0.51	+2.4
3,829,168	+		DZA65_RS17785	0.51	-0.0
3,829,168	+		DZA65_RS17785	0.51	+0.1
3,829,168	+		DZA65_RS17785	0.51	-0.6
3,829,168	+		DZA65_RS17785	0.51	-0.8
3,829,168	+		DZA65_RS17785	0.51	+0.1
3,829,168	+		DZA65_RS17785	0.51	+0.3
3,829,168	+		DZA65_RS17785	0.51	+2.1
3,829,168	+		DZA65_RS17785	0.51	-0.5
3,829,168	+		DZA65_RS17785	0.51	+0.6
3,829,168	+		DZA65_RS17785	0.51	+1.4
3,829,168	+		DZA65_RS17785	0.51	+0.6
3,829,168	+		DZA65_RS17785	0.51	-0.8
3,829,168	+		DZA65_RS17785	0.51	-0.3
3,829,168	+		DZA65_RS17785	0.51	+0.6
3,829,168	+		DZA65_RS17785	0.51	-0.3
3,829,168	+		DZA65_RS17785	0.51	+2.7
3,829,169	-		DZA65_RS17785	0.51	+1.0
3,829,169	-		DZA65_RS17785	0.51	-2.0
3,829,169	-		DZA65_RS17785	0.51	+0.6
3,829,169	-		DZA65_RS17785	0.51	+1.0
3,829,169	-		DZA65_RS17785	0.51	-1.2
3,829,169	-		DZA65_RS17785	0.51	-0.7
3,829,169	-		DZA65_RS17785	0.51	+0.2
3,829,169	-		DZA65_RS17785	0.51	+0.3
3,829,169	-		DZA65_RS17785	0.51	+0.4
3,829,169	-		DZA65_RS17785	0.51	-0.2
3,829,169	-		DZA65_RS17785	0.51	+1.3
3,829,169	-		DZA65_RS17785	0.51	-0.3
3,829,169	-		DZA65_RS17785	0.51	+1.1
3,829,169	-		DZA65_RS17785	0.51	-0.4
3,829,169	-		DZA65_RS17785	0.51	+0.9
3,829,169	-		DZA65_RS17785	0.51	-0.1
3,829,169	-		DZA65_RS17785	0.51	+0.1
3,829,189	+		DZA65_RS17785	0.53	-0.7
3,829,189	+		DZA65_RS17785	0.53	+0.7
3,829,190	-		DZA65_RS17785	0.53	+0.6
3,829,288	+		DZA65_RS17785	0.61	-0.4
3,829,289	-		DZA65_RS17785	0.61	+2.1
3,829,289	-		DZA65_RS17785	0.61	-3.0
3,829,315	+		DZA65_RS17785	0.63	+0.0
3,829,316	-		DZA65_RS17785	0.64	-1.6
3,829,354	-		DZA65_RS17785	0.67	+0.6
3,829,354	-		DZA65_RS17785	0.67	+1.2
3,829,366	+		DZA65_RS17785	0.68	-0.9
3,829,366	+		DZA65_RS17785	0.68	+1.6
3,829,366	+		DZA65_RS17785	0.68	-1.4
3,829,366	+		DZA65_RS17785	0.68	+0.6
3,829,366	+		DZA65_RS17785	0.68	-0.7
3,829,366	+		DZA65_RS17785	0.68	-0.4
3,829,367	-		DZA65_RS17785	0.68	-0.3
3,829,367	-		DZA65_RS17785	0.68	-0.2
3,829,367	-		DZA65_RS17785	0.68	-0.2
3,829,367	-		DZA65_RS17785	0.68	+0.7
3,829,367	-		DZA65_RS17785	0.68	-0.1
3,829,448	+		DZA65_RS17785	0.75	-1.6
3,829,534	+		DZA65_RS17785	0.82	-0.9
3,829,534	+		DZA65_RS17785	0.82	-0.0
3,829,534	+		DZA65_RS17785	0.82	-0.2
3,829,535	-		DZA65_RS17785	0.82	+0.3
3,829,535	-		DZA65_RS17785	0.82	-0.1
3,829,535	-		DZA65_RS17785	0.82	-0.8
3,829,535	-		DZA65_RS17785	0.82	-0.0
3,829,535	-		DZA65_RS17785	0.82	-0.8
3,829,535	-		DZA65_RS17785	0.82	-0.9
3,829,617	-		DZA65_RS17785	0.90	-0.4
3,829,662	+				+0.1
3,829,663	-				-0.3
3,829,663	-				-0.4
3,829,663	-				-1.0
3,829,663	-				-0.1
3,829,663	-				-0.4
3,829,663	-				+2.3
3,829,676	+				+0.1
3,829,677	-				+0.1
3,829,724	+				-0.3
3,829,724	+				+0.0
3,829,724	+				+1.2
3,829,724	+				-0.2
3,829,724	+				+1.6
3,829,724	+				-0.1
3,829,725	-				-0.5
3,829,736	-				+0.9
3,829,750	+				+0.7
3,829,750	+				-0.8
3,829,750	+				+0.3
3,829,750	+				-0.3
3,829,750	+				+0.2
3,829,750	+				-1.4
3,829,750	+				+0.1
3,829,751	-				-1.0
3,829,751	-				+0.1
3,829,810	+		DZA65_RS17790	0.11	+1.0
3,830,031	+		DZA65_RS17790	0.40	+0.6
3,830,032	-		DZA65_RS17790	0.40	-0.1
3,830,032	-		DZA65_RS17790	0.40	+1.6
3,830,032	-		DZA65_RS17790	0.40	-0.2
3,830,032	-		DZA65_RS17790	0.40	-0.8
3,830,037	+		DZA65_RS17790	0.41	+1.9
3,830,038	-		DZA65_RS17790	0.41	+0.6
3,830,079	+		DZA65_RS17790	0.46	+1.0
3,830,079	+		DZA65_RS17790	0.46	+0.2
3,830,079	+		DZA65_RS17790	0.46	+1.6
3,830,079	+		DZA65_RS17790	0.46	-0.6
3,830,079	+		DZA65_RS17790	0.46	-0.4
3,830,079	+		DZA65_RS17790	0.46	+0.2
3,830,079	+		DZA65_RS17790	0.46	+1.7
3,830,079	+		DZA65_RS17790	0.46	+0.4
3,830,080	-		DZA65_RS17790	0.46	+0.8
3,830,080	-		DZA65_RS17790	0.46	-0.3
3,830,080	-		DZA65_RS17790	0.46	+0.9
3,830,080	-		DZA65_RS17790	0.46	+0.2
3,830,082	+		DZA65_RS17790	0.46	-2.0
3,830,082	+		DZA65_RS17790	0.46	+2.3
3,830,082	+		DZA65_RS17790	0.46	-2.0
3,830,083	-		DZA65_RS17790	0.47	-0.6
3,830,083	-		DZA65_RS17790	0.47	+1.3
3,830,129	+		DZA65_RS17790	0.53	+1.6
3,830,130	-		DZA65_RS17790	0.53	+1.1
3,830,149	-		DZA65_RS17790	0.55	-1.9
3,830,149	-		DZA65_RS17790	0.55	-0.4
3,830,190	+		DZA65_RS17790	0.61	-0.1
3,830,191	-		DZA65_RS17790	0.61	-1.8
3,830,191	-		DZA65_RS17790	0.61	-0.2
3,830,205	+		DZA65_RS17790	0.62	+0.6
3,830,205	+		DZA65_RS17790	0.62	-1.4
3,830,206	-		DZA65_RS17790	0.63	-0.7
3,830,206	-		DZA65_RS17790	0.63	+0.2
3,830,206	-		DZA65_RS17790	0.63	+0.9
3,830,283	+		DZA65_RS17790	0.73	+0.3
3,830,283	+		DZA65_RS17790	0.73	+0.1
3,830,283	+		DZA65_RS17790	0.73	+0.6
3,830,283	+		DZA65_RS17790	0.73	-1.0
3,830,283	+		DZA65_RS17790	0.73	-0.3
3,830,283	+		DZA65_RS17790	0.73	-0.2
3,830,283	+		DZA65_RS17790	0.73	-0.5
3,830,283	+		DZA65_RS17790	0.73	-0.0
3,830,283	+		DZA65_RS17790	0.73	+0.6
3,830,283	+		DZA65_RS17790	0.73	-0.0
3,830,284	-		DZA65_RS17790	0.73	+0.7
3,830,284	-		DZA65_RS17790	0.73	+0.4
3,830,284	-		DZA65_RS17790	0.73	+0.3
3,830,284	-		DZA65_RS17790	0.73	+0.3
3,830,284	-		DZA65_RS17790	0.73	+0.8
3,830,284	-		DZA65_RS17790	0.73	+0.6
3,830,284	-		DZA65_RS17790	0.73	-0.8
3,830,284	-		DZA65_RS17790	0.73	+0.7
3,830,442	+				-1.3
3,830,442	+				+0.1
3,830,442	+				-1.0
3,830,490	+				+0.7
3,830,490	+				+0.2
3,830,490	+				+0.6
3,830,491	-				-2.0
3,830,491	-				-0.0
3,830,491	-				+0.8
3,830,491	-				+0.6
3,830,491	-				-0.4
3,830,526	+				-1.4
3,830,626	+				-2.0
3,830,627	-				-0.3