Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16270

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,527,375	+				-0.7
3,527,375	+				+0.2
3,527,376	-				-0.6
3,527,376	-				-1.4
3,527,419	-				-0.7
3,527,425	+				-1.0
3,527,437	-				+0.2
3,527,480	+				+1.4
3,527,480	+				+3.6
3,527,480	+				-0.6
3,527,480	+				+0.0
3,527,480	+				+0.7
3,527,480	+				-0.7
3,527,481	-				-0.6
3,527,481	-				+0.7
3,527,481	-				+0.0
3,527,604	-				-0.6
3,527,604	-				+0.2
3,527,619	+				+0.4
3,527,622	+				-2.6
3,527,685	+				-0.9
3,527,686	-				+1.1
3,527,755	+				+0.4
3,527,777	-				-0.1
3,527,800	+				+0.1
3,527,804	-				-1.3
3,527,804	-				+0.0
3,527,827	-				+0.1
3,527,883	-				+0.5
3,527,994	+		DZA65_RS16265	0.30	-0.0
3,527,995	-		DZA65_RS16265	0.30	+2.2
3,528,142	-		DZA65_RS16265	0.60	-0.6
3,528,220	+		DZA65_RS16265	0.76	-0.9
3,528,347	+				+0.6
3,528,580	-		DZA65_RS16270	0.11	-0.5
3,528,600	+		DZA65_RS16270	0.12	-0.0
3,528,601	-		DZA65_RS16270	0.12	-2.4
3,528,670	-		DZA65_RS16270	0.15	+1.6
3,528,674	+		DZA65_RS16270	0.15	+0.1
3,528,675	-		DZA65_RS16270	0.15	+0.2
3,528,675	-		DZA65_RS16270	0.15	-0.2
3,528,769	-		DZA65_RS16270	0.20	+0.9
3,528,769	-		DZA65_RS16270	0.20	-1.9
3,528,774	-		DZA65_RS16270	0.20	+0.1
3,528,868	+		DZA65_RS16270	0.25	+0.4
3,528,889	-		DZA65_RS16270	0.26	-2.1
3,528,963	+		DZA65_RS16270	0.29	-1.4
3,528,963	+		DZA65_RS16270	0.29	+0.2
3,528,977	+		DZA65_RS16270	0.30	+0.2
3,528,982	-		DZA65_RS16270	0.30	+0.2
3,529,014	+		DZA65_RS16270	0.32	-0.9
3,529,014	+		DZA65_RS16270	0.32	+1.2
3,529,029	+		DZA65_RS16270	0.32	+0.4
3,529,029	+		DZA65_RS16270	0.32	+0.3
3,529,029	+				+1.4
3,529,029	+		DZA65_RS16270	0.32	+0.4
3,529,030	-		DZA65_RS16270	0.32	+0.4
3,529,057	-		DZA65_RS16270	0.34	-1.9
3,529,057	-		DZA65_RS16270	0.34	-2.0
3,529,075	+		DZA65_RS16270	0.35	-0.5
3,529,076	-		DZA65_RS16270	0.35	-1.9
3,529,076	-		DZA65_RS16270	0.35	+1.0
3,529,101	+		DZA65_RS16270	0.36	+0.0
3,529,101	+		DZA65_RS16270	0.36	-0.1
3,529,106	+		DZA65_RS16270	0.36	+0.4
3,529,155	+		DZA65_RS16270	0.38	+0.8
3,529,156	-		DZA65_RS16270	0.39	-0.3
3,529,156	-		DZA65_RS16270	0.39	+1.0
3,529,198	+		DZA65_RS16270	0.41	-1.1
3,529,199	-		DZA65_RS16270	0.41	-0.3
3,529,237	-		DZA65_RS16270	0.42	+0.4
3,529,237	-		DZA65_RS16270	0.42	-2.4
3,529,237	-		DZA65_RS16270	0.42	-0.9
3,529,242	+		DZA65_RS16270	0.43	+1.2
3,529,242	+		DZA65_RS16270	0.43	-0.6
3,529,377	+		DZA65_RS16270	0.49	+0.4
3,529,413	+		DZA65_RS16270	0.51	-1.6
3,529,413	+		DZA65_RS16270	0.51	-0.0
3,529,413	+		DZA65_RS16270	0.51	-0.1
3,529,413	+		DZA65_RS16270	0.51	+1.2
3,529,413	+		DZA65_RS16270	0.51	+0.4
3,529,413	+		DZA65_RS16270	0.51	-0.1
3,529,413	+		DZA65_RS16270	0.51	-0.3
3,529,414	-		DZA65_RS16270	0.51	+0.9
3,529,414	-		DZA65_RS16270	0.51	+0.2
3,529,414	-		DZA65_RS16270	0.51	-0.0
3,529,414	-		DZA65_RS16270	0.51	+0.5
3,529,414	-		DZA65_RS16270	0.51	-0.2
3,529,414	-		DZA65_RS16270	0.51	+0.1
3,529,473	+		DZA65_RS16270	0.54	+0.0
3,529,473	+		DZA65_RS16270	0.54	+0.2
3,529,473	+		DZA65_RS16270	0.54	-0.6
3,529,473	+		DZA65_RS16270	0.54	+0.9
3,529,474	-		DZA65_RS16270	0.54	+1.4
3,529,474	-		DZA65_RS16270	0.54	-0.1
3,529,474	-		DZA65_RS16270	0.54	+0.4
3,529,474	-		DZA65_RS16270	0.54	+0.2
3,529,474	-		DZA65_RS16270	0.54	-1.1
3,529,474	-		DZA65_RS16270	0.54	+0.4
3,529,474	-		DZA65_RS16270	0.54	+0.9
3,529,527	+		DZA65_RS16270	0.56	+0.0
3,529,527	+		DZA65_RS16270	0.56	+0.4
3,529,528	-		DZA65_RS16270	0.56	-0.7
3,529,529	+		DZA65_RS16270	0.56	-0.1
3,529,529	+		DZA65_RS16270	0.56	+0.6
3,529,530	-		DZA65_RS16270	0.56	-0.0
3,529,530	-		DZA65_RS16270	0.56	+0.9
3,529,530	-		DZA65_RS16270	0.56	+1.0
3,529,530	-		DZA65_RS16270	0.56	+0.7
3,529,530	-		DZA65_RS16270	0.56	-0.6
3,529,662	+		DZA65_RS16270	0.63	-0.4
3,529,662	+		DZA65_RS16270	0.63	+0.1
3,529,663	-		DZA65_RS16270	0.63	+0.4
3,529,663	-		DZA65_RS16270	0.63	-1.6
3,529,663	-		DZA65_RS16270	0.63	+0.4
3,529,690	-		DZA65_RS16270	0.64	-0.3
3,529,709	+		DZA65_RS16270	0.65	-0.6
3,529,741	+		DZA65_RS16270	0.67	+0.3
3,529,741	+		DZA65_RS16270	0.67	-0.6
3,529,742	-		DZA65_RS16270	0.67	-0.5
3,529,768	-		DZA65_RS16270	0.68	+0.4
3,529,791	+		DZA65_RS16270	0.69	-0.2
3,529,791	+		DZA65_RS16270	0.69	+1.0
3,529,792	-		DZA65_RS16270	0.69	+0.6
3,529,792	-		DZA65_RS16270	0.69	+0.3
3,529,792	-		DZA65_RS16270	0.69	+1.2
3,529,792	-		DZA65_RS16270	0.69	-0.9
3,529,794	+		DZA65_RS16270	0.69	-0.3
3,529,795	-		DZA65_RS16270	0.69	-1.1
3,529,795	-		DZA65_RS16270	0.69	+0.9
3,529,795	-		DZA65_RS16270	0.69	+0.4
3,529,795	-		DZA65_RS16270	0.69	-1.6
3,529,797	+		DZA65_RS16270	0.69	+0.2
3,529,798	-		DZA65_RS16270	0.69	-0.8
3,529,798	-		DZA65_RS16270	0.69	+0.2
3,529,817	+		DZA65_RS16270	0.70	+0.6
3,529,817	+		DZA65_RS16270	0.70	+0.1
3,529,817	+		DZA65_RS16270	0.70	+0.4
3,529,865	+		DZA65_RS16270	0.72	+0.4
3,529,865	+		DZA65_RS16270	0.72	-0.2
3,529,865	+		DZA65_RS16270	0.72	+1.3
3,529,865	+		DZA65_RS16270	0.72	-0.7
3,529,865	+		DZA65_RS16270	0.72	+0.1
3,529,866	-		DZA65_RS16270	0.73	+0.4
3,529,866	-		DZA65_RS16270	0.73	+0.7
3,529,866	-		DZA65_RS16270	0.73	-0.3
3,529,866	-		DZA65_RS16270	0.73	-0.1
3,529,869	+		DZA65_RS16270	0.73	-1.6
3,529,942	-		DZA65_RS16270	0.76	-0.4
3,529,964	+		DZA65_RS16270	0.77	-1.0
3,529,992	+		DZA65_RS16270	0.79	-2.1
3,529,992	+		DZA65_RS16270	0.79	+0.8
3,529,993	-		DZA65_RS16270	0.79	+0.0
3,530,037	+		DZA65_RS16270	0.81	-0.1
3,530,037	+		DZA65_RS16270	0.81	-0.9
3,530,040	+		DZA65_RS16270	0.81	+0.2
3,530,040	+		DZA65_RS16270	0.81	+0.8
3,530,040	+		DZA65_RS16270	0.81	-0.1
3,530,041	-		DZA65_RS16270	0.81	+0.3
3,530,041	-		DZA65_RS16270	0.81	+1.2
3,530,059	-		DZA65_RS16270	0.82	-0.1
3,530,059	-		DZA65_RS16270	0.82	-0.1
3,530,072	+		DZA65_RS16270	0.82	+0.6
3,530,072	+		DZA65_RS16270	0.82	-1.1
3,530,073	-		DZA65_RS16270	0.82	+0.7
3,530,073	-		DZA65_RS16270	0.82	+1.3
3,530,076	+		DZA65_RS16270	0.83	+1.4
3,530,076	+				-0.6
3,530,077	-		DZA65_RS16270	0.83	+0.7
3,530,077	-		DZA65_RS16270	0.83	+2.2
3,530,175	+		DZA65_RS16270	0.87	+0.8
3,530,195	+		DZA65_RS16270	0.88	+1.2
3,530,196	-		DZA65_RS16270	0.88	+0.4
3,530,196	-		DZA65_RS16270	0.88	+0.6
3,530,196	-		DZA65_RS16270	0.88	+0.8
3,530,196	-				+2.4
3,530,196	-		DZA65_RS16270	0.88	+0.1
3,530,196	-		DZA65_RS16270	0.88	+0.1
3,530,196	-		DZA65_RS16270	0.88	+1.9
3,530,196	-		DZA65_RS16270	0.88	-0.1
3,530,203	+		DZA65_RS16270	0.89	-0.5
3,530,203	+		DZA65_RS16270	0.89	-0.8
3,530,204	-		DZA65_RS16270	0.89	-1.2
3,530,204	-		DZA65_RS16270	0.89	-0.2
3,530,204	-		DZA65_RS16270	0.89	+0.2
3,530,204	-		DZA65_RS16270	0.89	-0.6
3,530,204	-		DZA65_RS16270	0.89	-1.1
3,530,205	+		DZA65_RS16270	0.89	-0.8
3,530,206	-		DZA65_RS16270	0.89	-1.6
3,530,256	+				+0.3
3,530,256	+				+0.5
3,530,256	+				-0.4
3,530,256	+				+1.2
3,530,257	-				-0.6
3,530,259	+				+0.8
3,530,259	+				+1.2
3,530,391	+				+1.9
3,530,437	+				+0.6
3,530,437	+				-0.1
3,530,437	+				+0.7
3,530,438	-				+0.4
3,530,438	-				+1.1
3,530,438	-				-1.1
3,530,438	-				+1.2
3,530,453	-				+1.0
3,530,520	+				-0.6
3,530,521	-				+0.0
3,530,521	-				-0.4
3,530,646	-		DZA65_RS16275	0.14	-0.6
3,530,700	+		DZA65_RS16275	0.18	-0.1
3,530,700	+		DZA65_RS16275	0.18	+1.2
3,530,700	+		DZA65_RS16275	0.18	+0.6
3,530,700	+		DZA65_RS16275	0.18	-0.6
3,530,700	+		DZA65_RS16275	0.18	+0.3
3,530,700	+		DZA65_RS16275	0.18	-0.2
3,530,700	+		DZA65_RS16275	0.18	+0.4
3,530,700	+		DZA65_RS16275	0.18	+1.1
3,530,700	+		DZA65_RS16275	0.18	+0.2
3,530,700	+		DZA65_RS16275	0.18	-0.3
3,530,700	+		DZA65_RS16275	0.18	-0.1
3,530,701	-		DZA65_RS16275	0.18	-0.6
3,530,701	-		DZA65_RS16275	0.18	+0.4
3,530,701	-		DZA65_RS16275	0.18	+1.1
3,530,701	-		DZA65_RS16275	0.18	+0.1
3,530,701	-		DZA65_RS16275	0.18	-1.4
3,530,701	-		DZA65_RS16275	0.18	+0.0
3,530,701	-		DZA65_RS16275	0.18	-0.6
3,530,701	-		DZA65_RS16275	0.18	-0.9
3,530,728	-		DZA65_RS16275	0.20	-0.8
3,530,753	+		DZA65_RS16275	0.21	-0.1
3,530,762	+		DZA65_RS16275	0.22	+0.2
3,530,763	-		DZA65_RS16275	0.22	+0.5
3,530,768	+		DZA65_RS16275	0.22	+1.4
3,530,769	-		DZA65_RS16275	0.22	+0.0
3,530,825	+		DZA65_RS16275	0.26	+1.0
3,530,825	+		DZA65_RS16275	0.26	-1.7
3,530,826	-				+0.4
3,530,933	-		DZA65_RS16275	0.33	+0.0
3,530,939	+		DZA65_RS16275	0.34	-0.6
3,530,939	+		DZA65_RS16275	0.34	-0.0
3,530,939	+		DZA65_RS16275	0.34	+0.0
3,530,939	+		DZA65_RS16275	0.34	+0.0
3,530,940	-		DZA65_RS16275	0.34	+0.7
3,530,940	-		DZA65_RS16275	0.34	+0.7
3,530,940	-		DZA65_RS16275	0.34	-1.3
3,530,995	+		DZA65_RS16275	0.38	+0.1
3,530,995	+		DZA65_RS16275	0.38	-0.9
3,530,996	-		DZA65_RS16275	0.38	-0.1
3,530,996	-		DZA65_RS16275	0.38	+0.2
3,530,996	-		DZA65_RS16275	0.38	+0.8
3,531,001	+		DZA65_RS16275	0.38	+1.8
3,531,002	-		DZA65_RS16275	0.38	+1.4
3,531,002	-		DZA65_RS16275	0.38	-0.1
3,531,037	+		DZA65_RS16275	0.40	+0.3
3,531,048	+		DZA65_RS16275	0.41	-0.6
3,531,049	-		DZA65_RS16275	0.41	+2.0
3,531,049	-		DZA65_RS16275	0.41	-0.1
3,531,080	+		DZA65_RS16275	0.43	+0.4
3,531,080	+		DZA65_RS16275	0.43	+0.4
3,531,081	-		DZA65_RS16275	0.43	+0.9
3,531,103	+		DZA65_RS16275	0.45	-0.3
3,531,103	+		DZA65_RS16275	0.45	-0.9
3,531,103	+		DZA65_RS16275	0.45	-0.2
3,531,104	-		DZA65_RS16275	0.45	+0.1
3,531,104	-		DZA65_RS16275	0.45	-1.5
3,531,104	-		DZA65_RS16275	0.45	+0.3
3,531,203	+		DZA65_RS16275	0.52	+0.6
3,531,204	-		DZA65_RS16275	0.52	-0.1
3,531,204	-		DZA65_RS16275	0.52	-2.7
3,531,219	+		DZA65_RS16275	0.53	-2.6
3,531,219	+		DZA65_RS16275	0.53	-1.1
3,531,220	-		DZA65_RS16275	0.53	-2.4
3,531,220	-		DZA65_RS16275	0.53	+1.2
3,531,220	-		DZA65_RS16275	0.53	-0.9
3,531,257	+		DZA65_RS16275	0.55	-0.4
3,531,257	+		DZA65_RS16275	0.55	+0.4
3,531,258	-		DZA65_RS16275	0.55	-0.3
3,531,258	-		DZA65_RS16275	0.55	-0.2
3,531,285	+		DZA65_RS16275	0.57	-0.3
3,531,285	+		DZA65_RS16275	0.57	-2.1
3,531,285	+		DZA65_RS16275	0.57	+0.7
3,531,285	+		DZA65_RS16275	0.57	+0.9
3,531,285	+		DZA65_RS16275	0.57	-1.1
3,531,286	-		DZA65_RS16275	0.57	+0.0
3,531,286	-		DZA65_RS16275	0.57	+2.0
3,531,299	+		DZA65_RS16275	0.58	-0.3
3,531,299	+		DZA65_RS16275	0.58	+2.6
3,531,300	-		DZA65_RS16275	0.58	-1.6
3,531,300	-		DZA65_RS16275	0.58	-0.4
3,531,300	-		DZA65_RS16275	0.58	+0.1
3,531,332	+		DZA65_RS16275	0.60	-0.7
3,531,359	+		DZA65_RS16275	0.62	+0.8
3,531,430	+				+0.0
3,531,430	+		DZA65_RS16275	0.67	+0.1
3,531,431	-		DZA65_RS16275	0.67	+0.2