Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14580

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,173,012	+		DZA65_RS14570	0.31	-0.3
3,173,012	+		DZA65_RS14570	0.31	+0.5
3,173,012	+		DZA65_RS14570	0.31	+1.5
3,173,012	+		DZA65_RS14570	0.31	+1.7
3,173,012	+		DZA65_RS14570	0.31	-1.0
3,173,012	+		DZA65_RS14570	0.31	+0.9
3,173,013	-		DZA65_RS14570	0.31	-0.4
3,173,013	-		DZA65_RS14570	0.31	-1.0
3,173,030	+		DZA65_RS14570	0.34	-1.7
3,173,030	+		DZA65_RS14570	0.34	+0.1
3,173,030	+		DZA65_RS14570	0.34	-0.1
3,173,031	-		DZA65_RS14570	0.34	+0.1
3,173,031	-		DZA65_RS14570	0.34	-1.0
3,173,031	-		DZA65_RS14570	0.34	-0.4
3,173,089	+		DZA65_RS14570	0.42	+0.9
3,173,089	+		DZA65_RS14570	0.42	+0.9
3,173,089	+		DZA65_RS14570	0.42	-0.6
3,173,090	-		DZA65_RS14570	0.43	-1.0
3,173,090	-		DZA65_RS14570	0.43	-0.6
3,173,092	+		DZA65_RS14570	0.43	+0.8
3,173,092	+		DZA65_RS14570	0.43	+0.9
3,173,092	+		DZA65_RS14570	0.43	-1.0
3,173,092	+		DZA65_RS14570	0.43	+0.3
3,173,092	+		DZA65_RS14570	0.43	+0.3
3,173,092	+		DZA65_RS14570	0.43	-1.0
3,173,092	+		DZA65_RS14570	0.43	-0.4
3,173,093	-		DZA65_RS14570	0.43	-0.6
3,173,105	+		DZA65_RS14570	0.45	+0.3
3,173,106	-		DZA65_RS14570	0.45	-0.5
3,173,106	-		DZA65_RS14570	0.45	+1.2
3,173,127	+		DZA65_RS14570	0.48	+0.7
3,173,127	+		DZA65_RS14570	0.48	+0.3
3,173,128	-		DZA65_RS14570	0.48	-0.7
3,173,128	-		DZA65_RS14570	0.48	+0.8
3,173,128	-		DZA65_RS14570	0.48	+0.3
3,173,128	-		DZA65_RS14570	0.48	+0.6
3,173,131	-		DZA65_RS14570	0.49	+2.5
3,173,131	-		DZA65_RS14570	0.49	+0.4
3,173,131	-		DZA65_RS14570	0.49	-0.7
3,173,136	+		DZA65_RS14570	0.49	-0.7
3,173,137	-		DZA65_RS14570	0.50	-0.7
3,173,137	-		DZA65_RS14570	0.50	+0.9
3,173,137	-		DZA65_RS14570	0.50	-0.9
3,173,144	+		DZA65_RS14570	0.51	+1.1
3,173,229	+		DZA65_RS14570	0.63	-0.3
3,173,229	+		DZA65_RS14570	0.63	+2.9
3,173,229	+		DZA65_RS14570	0.63	+0.9
3,173,229	+		DZA65_RS14570	0.63	-0.2
3,173,230	-		DZA65_RS14570	0.63	-1.7
3,173,240	-		DZA65_RS14570	0.65	-2.9
3,173,240	-		DZA65_RS14570	0.65	-0.5
3,173,333	+		DZA65_RS14570	0.78	+0.0
3,173,333	+		DZA65_RS14570	0.78	-0.1
3,173,333	+		DZA65_RS14570	0.78	+0.5
3,173,333	+		DZA65_RS14570	0.78	+0.3
3,173,333	+		DZA65_RS14570	0.78	-0.0
3,173,333	+		DZA65_RS14570	0.78	+0.9
3,173,333	+		DZA65_RS14570	0.78	-0.3
3,173,334	-		DZA65_RS14570	0.79	+0.7
3,173,334	-		DZA65_RS14570	0.79	+0.7
3,173,334	-		DZA65_RS14570	0.79	+0.9
3,173,334	-				-0.7
3,173,334	-		DZA65_RS14570	0.79	-0.4
3,173,334	-		DZA65_RS14570	0.79	-0.8
3,173,334	-		DZA65_RS14570	0.79	-0.2
3,173,351	+		DZA65_RS14570	0.81	+1.7
3,173,391	+		DZA65_RS14570	0.87	-0.3
3,173,391	+		DZA65_RS14570	0.87	-0.2
3,173,391	+		DZA65_RS14570	0.87	-0.2
3,173,391	+		DZA65_RS14570	0.87	-0.7
3,173,391	+		DZA65_RS14570	0.87	+0.6
3,173,392	-		DZA65_RS14570	0.87	+0.9
3,173,392	-		DZA65_RS14570	0.87	-0.2
3,173,392	-		DZA65_RS14570	0.87	+0.3
3,173,392	-		DZA65_RS14570	0.87	+0.6
3,173,404	+		DZA65_RS14570	0.89	+0.5
3,173,423	+				+0.3
3,173,423	+				-0.3
3,173,423	+				-0.0
3,173,424	-				+1.0
3,173,424	-				-1.8
3,173,424	-				+1.1
3,173,447	+				+1.3
3,173,447	+				-0.7
3,173,447	+				-1.7
3,173,447	+				+1.3
3,173,447	+				-0.7
3,173,447	+				-0.3
3,173,447	+				+0.2
3,173,447	+				-0.1
3,173,448	-				-0.7
3,173,476	+				-0.3
3,173,493	+				+0.3
3,173,493	+				-0.3
3,173,493	+				+0.1
3,173,493	+				-0.9
3,173,494	-				-0.6
3,173,522	-				+1.1
3,173,554	-				-0.1
3,173,565	-				-0.5
3,173,578	+				+0.6
3,173,579	-				-0.4
3,173,579	-				-0.2
3,173,614	+				+0.3
3,173,615	-				+1.1
3,173,615	-				-0.6
3,173,650	+				-0.0
3,173,650	+				+1.1
3,173,650	+				-2.3
3,173,651	-				+0.0
3,173,651	-				+1.0
3,173,666	+		DZA65_RS14575	0.14	+0.0
3,173,667	-		DZA65_RS14575	0.14	-0.2
3,173,733	-		DZA65_RS14575	0.31	-0.4
3,173,734	+		DZA65_RS14575	0.31	+0.9
3,173,734	+		DZA65_RS14575	0.31	-0.6
3,173,734	+		DZA65_RS14575	0.31	-0.2
3,173,735	-		DZA65_RS14575	0.31	-1.9
3,173,746	+		DZA65_RS14575	0.34	+0.1
3,173,747	-		DZA65_RS14575	0.34	-0.1
3,173,767	+		DZA65_RS14575	0.39	-0.9
3,173,767	+		DZA65_RS14575	0.39	+0.7
3,173,767	+		DZA65_RS14575	0.39	-0.3
3,173,767	+		DZA65_RS14575	0.39	-0.3
3,173,767	+		DZA65_RS14575	0.39	+1.7
3,173,767	+		DZA65_RS14575	0.39	+2.3
3,173,767	+		DZA65_RS14575	0.39	+0.6
3,173,767	+		DZA65_RS14575	0.39	-0.9
3,173,767	+		DZA65_RS14575	0.39	-1.2
3,173,767	+		DZA65_RS14575	0.39	+1.1
3,173,767	+		DZA65_RS14575	0.39	+0.5
3,173,767	+		DZA65_RS14575	0.39	-0.1
3,173,767	+		DZA65_RS14575	0.39	-0.5
3,173,767	+		DZA65_RS14575	0.39	-0.5
3,173,767	+		DZA65_RS14575	0.39	+0.5
3,173,767	+		DZA65_RS14575	0.39	-0.4
3,173,767	+		DZA65_RS14575	0.39	-0.3
3,173,768	-		DZA65_RS14575	0.40	-0.5
3,173,768	-		DZA65_RS14575	0.40	+1.9
3,173,768	-		DZA65_RS14575	0.40	-1.2
3,173,768	-		DZA65_RS14575	0.40	+0.6
3,173,768	-		DZA65_RS14575	0.40	+1.3
3,173,772	-		DZA65_RS14575	0.41	-0.2
3,173,772	-		DZA65_RS14575	0.41	+0.4
3,173,789	+		DZA65_RS14575	0.45	+0.9
3,173,789	+		DZA65_RS14575	0.45	-0.5
3,173,789	+		DZA65_RS14575	0.45	-0.6
3,173,790	-				+2.6
3,173,790	-		DZA65_RS14575	0.45	-0.9
3,173,790	-		DZA65_RS14575	0.45	+0.0
3,173,790	-		DZA65_RS14575	0.45	+0.6
3,173,790	-		DZA65_RS14575	0.45	+2.6
3,173,790	-		DZA65_RS14575	0.45	+0.7
3,173,790	-				+2.1
3,173,806	+		DZA65_RS14575	0.49	-1.6
3,173,806	+		DZA65_RS14575	0.49	+0.0
3,173,822	+		DZA65_RS14575	0.54	-0.0
3,173,838	+		DZA65_RS14575	0.58	+1.3
3,173,838	+		DZA65_RS14575	0.58	-0.7
3,173,838	+		DZA65_RS14575	0.58	+0.5
3,173,838	+		DZA65_RS14575	0.58	-0.9
3,173,838	+		DZA65_RS14575	0.58	+0.3
3,173,839	-		DZA65_RS14575	0.58	-0.5
3,173,839	-		DZA65_RS14575	0.58	-0.5
3,173,839	-				-2.0
3,173,839	-		DZA65_RS14575	0.58	-0.5
3,173,839	-		DZA65_RS14575	0.58	-0.2
3,173,851	-		DZA65_RS14575	0.61	+0.3
3,173,869	+		DZA65_RS14575	0.66	+0.3
3,173,869	+		DZA65_RS14575	0.66	-1.3
3,173,869	+		DZA65_RS14575	0.66	-0.5
3,173,869	+		DZA65_RS14575	0.66	-1.8
3,173,869	+		DZA65_RS14575	0.66	+0.4
3,173,869	+		DZA65_RS14575	0.66	+1.0
3,173,870	-		DZA65_RS14575	0.66	-0.5
3,173,870	-		DZA65_RS14575	0.66	+0.6
3,173,870	-		DZA65_RS14575	0.66	-0.7
3,173,870	-		DZA65_RS14575	0.66	+0.9
3,173,870	-		DZA65_RS14575	0.66	-0.2
3,173,870	-		DZA65_RS14575	0.66	-0.7
3,173,870	-		DZA65_RS14575	0.66	-0.2
3,173,882	-		DZA65_RS14575	0.69	-0.8
3,173,882	-		DZA65_RS14575	0.69	+0.8
3,173,960	+		DZA65_RS14575	0.89	-1.7
3,173,960	+		DZA65_RS14575	0.89	+0.5
3,173,960	+		DZA65_RS14575	0.89	+0.6
3,173,960	+		DZA65_RS14575	0.89	+1.0
3,173,960	+		DZA65_RS14575	0.89	+1.3
3,173,960	+		DZA65_RS14575	0.89	+0.3
3,173,961	-		DZA65_RS14575	0.89	-0.5
3,173,961	-		DZA65_RS14575	0.89	-0.7
3,173,961	-		DZA65_RS14575	0.89	-1.3
3,173,961	-		DZA65_RS14575	0.89	-0.1
3,173,968	+				+0.3
3,173,968	+				+0.9
3,173,969	-				-0.7
3,173,969	-				+0.5
3,173,969	-				+0.0
3,173,980	-				+1.2
3,173,980	-				-1.0
3,173,982	-				+0.7
3,173,994	-				+1.5
3,173,994	-				-0.5
3,174,003	+				+0.5
3,174,004	-				-3.0
3,174,112	-		DZA65_RS14580	0.12	+1.0
3,174,129	+		DZA65_RS14580	0.14	+0.4
3,174,129	+		DZA65_RS14580	0.14	-0.5
3,174,130	-		DZA65_RS14580	0.14	+0.6
3,174,155	+		DZA65_RS14580	0.17	-0.7
3,174,156	-		DZA65_RS14580	0.18	+0.4
3,174,166	-		DZA65_RS14580	0.19	-0.8
3,174,167	+		DZA65_RS14580	0.19	-1.3
3,174,167	+		DZA65_RS14580	0.19	-0.6
3,174,167	+		DZA65_RS14580	0.19	-0.6
3,174,167	+		DZA65_RS14580	0.19	-0.9
3,174,168	-		DZA65_RS14580	0.19	+0.3
3,174,168	-		DZA65_RS14580	0.19	+1.6
3,174,168	-		DZA65_RS14580	0.19	+1.7
3,174,172	+		DZA65_RS14580	0.19	+0.5
3,174,173	-		DZA65_RS14580	0.20	-0.4
3,174,183	+		DZA65_RS14580	0.21	-0.5
3,174,202	+		DZA65_RS14580	0.23	+0.2
3,174,202	+		DZA65_RS14580	0.23	+0.5
3,174,202	+		DZA65_RS14580	0.23	-0.2
3,174,202	+		DZA65_RS14580	0.23	+0.1
3,174,203	-		DZA65_RS14580	0.23	-0.9
3,174,203	-		DZA65_RS14580	0.23	+0.2
3,174,331	+		DZA65_RS14580	0.38	-0.1
3,174,331	+		DZA65_RS14580	0.38	+0.3
3,174,331	+		DZA65_RS14580	0.38	+0.8
3,174,331	+		DZA65_RS14580	0.38	-0.2
3,174,332	-		DZA65_RS14580	0.38	+0.3
3,174,332	-		DZA65_RS14580	0.38	-0.0
3,174,332	-		DZA65_RS14580	0.38	+1.3
3,174,332	-		DZA65_RS14580	0.38	-0.0
3,174,371	+		DZA65_RS14580	0.43	+0.1
3,174,371	+		DZA65_RS14580	0.43	+0.5
3,174,371	+		DZA65_RS14580	0.43	-0.7
3,174,372	-		DZA65_RS14580	0.43	-0.2
3,174,402	+		DZA65_RS14580	0.47	+0.8
3,174,430	+		DZA65_RS14580	0.50	-0.4
3,174,431	-		DZA65_RS14580	0.50	+0.6
3,174,459	+		DZA65_RS14580	0.53	-0.6
3,174,459	+		DZA65_RS14580	0.53	-0.0
3,174,460	-		DZA65_RS14580	0.53	-0.4
3,174,460	-		DZA65_RS14580	0.53	+0.3
3,174,525	+		DZA65_RS14580	0.61	+0.2
3,174,526	-		DZA65_RS14580	0.61	+0.2
3,174,540	+		DZA65_RS14580	0.63	-0.6
3,174,613	-		DZA65_RS14580	0.71	-0.4
3,174,617	+		DZA65_RS14580	0.72	-0.3
3,174,617	+		DZA65_RS14580	0.72	+0.6
3,174,617	+		DZA65_RS14580	0.72	-0.4
3,174,617	+		DZA65_RS14580	0.72	+2.0
3,174,617	+		DZA65_RS14580	0.72	-0.4
3,174,617	+		DZA65_RS14580	0.72	+0.4
3,174,617	+		DZA65_RS14580	0.72	+0.3
3,174,617	+		DZA65_RS14580	0.72	+0.5
3,174,618	-		DZA65_RS14580	0.72	+0.4
3,174,618	-		DZA65_RS14580	0.72	-0.6
3,174,618	-		DZA65_RS14580	0.72	-0.4
3,174,618	-		DZA65_RS14580	0.72	+2.4
3,174,618	-				+1.3
3,174,618	-		DZA65_RS14580	0.72	+2.9
3,174,618	-		DZA65_RS14580	0.72	+0.2
3,174,618	-		DZA65_RS14580	0.72	+0.9
3,174,618	-		DZA65_RS14580	0.72	-0.2
3,174,620	+		DZA65_RS14580	0.72	-0.2
3,174,620	+		DZA65_RS14580	0.72	-0.4
3,174,621	-		DZA65_RS14580	0.72	-1.0
3,174,639	+		DZA65_RS14580	0.74	+0.9
3,174,640	-		DZA65_RS14580	0.75	+0.3
3,174,643	-		DZA65_RS14580	0.75	-0.3
3,174,643	-		DZA65_RS14580	0.75	-1.9
3,174,643	-		DZA65_RS14580	0.75	+0.9
3,174,643	-		DZA65_RS14580	0.75	+0.1
3,174,643	-		DZA65_RS14580	0.75	-1.9
3,174,644	+		DZA65_RS14580	0.75	-2.3
3,174,644	+		DZA65_RS14580	0.75	+0.6
3,174,644	+		DZA65_RS14580	0.75	-0.1
3,174,644	+		DZA65_RS14580	0.75	+0.5
3,174,644	+		DZA65_RS14580	0.75	+0.1
3,174,644	+		DZA65_RS14580	0.75	+0.6
3,174,644	+		DZA65_RS14580	0.75	+0.8
3,174,644	+		DZA65_RS14580	0.75	-0.2
3,174,645	-		DZA65_RS14580	0.75	-0.9
3,174,645	-		DZA65_RS14580	0.75	-0.5
3,174,645	-		DZA65_RS14580	0.75	+1.2
3,174,645	-		DZA65_RS14580	0.75	-0.4
3,174,645	-		DZA65_RS14580	0.75	+1.3
3,174,691	+		DZA65_RS14580	0.81	+0.5
3,174,691	+		DZA65_RS14580	0.81	-0.6
3,174,692	-		DZA65_RS14580	0.81	-1.5
3,174,692	-		DZA65_RS14580	0.81	+0.3
3,174,726	+		DZA65_RS14580	0.85	-0.7
3,174,727	-		DZA65_RS14580	0.85	+1.7
3,174,727	-		DZA65_RS14580	0.85	-0.7
3,174,727	-		DZA65_RS14580	0.85	-1.9
3,174,731	-		DZA65_RS14580	0.85	-1.3
3,174,731	-		DZA65_RS14580	0.85	+0.1
3,174,847	+				-0.7
3,174,847	+				-1.0
3,174,847	+				-0.9
3,174,847	+				+0.0
3,174,848	-				-0.7
3,174,848	-				+0.3
3,174,848	-				-0.6
3,174,848	-				-1.3
3,174,848	-				+1.9
3,174,849	+				+0.3
3,174,849	+				+0.2
3,174,849	+				+2.3
3,174,849	+				+0.7
3,174,850	-				-0.3
3,174,850	-				-0.7
3,174,859	-				-0.5
3,174,876	+				+0.5
3,174,876	+				-0.5
3,174,877	-				+0.9
3,174,877	-				-0.2
3,174,883	+				+1.9
3,174,883	+				+0.3
3,174,883	+				-2.0
3,174,883	+				-0.7
3,174,887	+				-0.9
3,174,887	+				+0.5
3,174,887	+				-0.1
3,174,888	-				-1.7
3,174,888	-				+0.3
3,174,888	-				-0.7
3,174,888	-				-0.9
3,174,926	-				+1.1
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