Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12265

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,620,315	+		DZA65_RS12260	0.69	-0.1
2,620,315	+		DZA65_RS12260	0.69	-0.2
2,620,315	+		DZA65_RS12260	0.69	+1.3
2,620,316	-		DZA65_RS12260	0.69	-0.5
2,620,355	+		DZA65_RS12260	0.73	+0.7
2,620,356	-		DZA65_RS12260	0.73	-1.2
2,620,368	+		DZA65_RS12260	0.74	+1.1
2,620,387	+		DZA65_RS12260	0.75	-0.3
2,620,400	-		DZA65_RS12260	0.76	+0.3
2,620,400	-		DZA65_RS12260	0.76	-2.8
2,620,400	-		DZA65_RS12260	0.76	-0.3
2,620,409	-		DZA65_RS12260	0.77	+0.7
2,620,414	+		DZA65_RS12260	0.77	+0.1
2,620,414	+		DZA65_RS12260	0.77	+0.7
2,620,415	-		DZA65_RS12260	0.77	+2.1
2,620,415	-		DZA65_RS12260	0.77	-1.3
2,620,415	-		DZA65_RS12260	0.77	-0.1
2,620,438	+		DZA65_RS12260	0.79	+0.2
2,620,438	+		DZA65_RS12260	0.79	+1.7
2,620,438	+		DZA65_RS12260	0.79	-0.0
2,620,439	-		DZA65_RS12260	0.79	-3.3
2,620,439	-		DZA65_RS12260	0.79	-1.1
2,620,527	-		DZA65_RS12260	0.87	+0.7
2,620,609	+				+0.0
2,620,609	+				-2.3
2,620,612	-				+0.9
2,620,612	-				+0.8
2,620,693	+				-0.4
2,620,694	-				-1.0
2,620,768	-				-1.1
2,620,782	+				-0.1
2,620,782	+				+0.8
2,620,783	-				+0.6
2,620,783	-				-0.2
2,620,823	+				-0.6
2,620,824	-				-1.5
2,620,833	-				-0.6
2,620,834	+				+0.1
2,620,835	-				-1.7
2,620,835	-				+0.1
2,620,835	-				+0.1
2,620,835	-				+0.1
2,620,836	+				+1.4
2,620,836	+				+0.6
2,620,836	+				-2.2
2,620,836	+				-0.4
2,620,837	-				-2.5
2,620,837	-				-0.2
2,620,837	-				-0.6
2,620,837	-				+0.1
2,620,837	-				+0.5
2,620,837	-				+1.1
2,620,837	-				-1.7
2,620,880	+				+0.1
2,620,927	+				-3.1
2,620,928	-				-0.3
2,620,985	-				+1.4
2,620,988	+				-0.5
2,621,025	-				-0.0
2,621,034	+				+0.5
2,621,052	-				-0.1
2,621,081	-				+0.8
2,621,228	+				+0.6
2,621,253	+				-0.5
2,621,265	+				+0.4
2,621,265	+				+0.0
2,621,266	-				-1.2
2,621,266	-				-0.4
2,621,266	-				-0.1
2,621,269	+				+0.5
2,621,270	-				-1.4
2,621,270	-				+1.1
2,621,272	-				-0.3
2,621,290	-				-0.1
2,621,290	-				-0.0
2,621,290	-				+0.3
2,621,293	-				-0.2
2,621,293	-				-1.2
2,621,304	-				-1.2
2,621,381	-				+1.8
2,621,409	+				+0.1
2,621,409	+				-1.5
2,621,409	+				-0.6
2,621,410	-				-0.3
2,621,419	-				-1.1
2,621,460	+		DZA65_RS12265	0.11	-0.2
2,621,460	+		DZA65_RS12265	0.11	-1.9
2,621,461	-		DZA65_RS12265	0.11	-2.1
2,621,461	-		DZA65_RS12265	0.11	+0.3
2,621,482	-				-0.3
2,621,484	+		DZA65_RS12265	0.12	+0.5
2,621,540	+		DZA65_RS12265	0.15	-1.1
2,621,541	-		DZA65_RS12265	0.15	-0.3
2,621,541	-		DZA65_RS12265	0.15	-2.5
2,621,579	+		DZA65_RS12265	0.17	+0.1
2,621,580	-		DZA65_RS12265	0.17	+0.4
2,621,590	+		DZA65_RS12265	0.17	+0.9
2,621,712	+		DZA65_RS12265	0.23	+1.2
2,621,713	-		DZA65_RS12265	0.24	+0.3
2,621,721	+		DZA65_RS12265	0.24	-1.6
2,621,721	+		DZA65_RS12265	0.24	-0.5
2,621,722	-		DZA65_RS12265	0.24	+1.9
2,621,739	-				+1.4
2,621,751	+		DZA65_RS12265	0.25	+2.0
2,621,944	+		DZA65_RS12265	0.35	-0.9
2,621,944	+		DZA65_RS12265	0.35	+0.6
2,621,944	+		DZA65_RS12265	0.35	+0.2
2,621,945	-		DZA65_RS12265	0.35	+0.1
2,621,945	-		DZA65_RS12265	0.35	-0.2
2,621,945	-		DZA65_RS12265	0.35	-2.0
2,621,953	+		DZA65_RS12265	0.36	-0.3
2,621,953	+		DZA65_RS12265	0.36	-1.1
2,621,954	-		DZA65_RS12265	0.36	+0.9
2,621,954	-		DZA65_RS12265	0.36	-0.5
2,621,965	+		DZA65_RS12265	0.36	+0.9
2,621,965	+		DZA65_RS12265	0.36	-0.9
2,621,966	-		DZA65_RS12265	0.36	+1.3
2,621,966	-		DZA65_RS12265	0.36	+0.1
2,621,966	-		DZA65_RS12265	0.36	+1.4
2,621,966	-		DZA65_RS12265	0.36	-0.1
2,621,966	-		DZA65_RS12265	0.36	-0.9
2,621,967	+		DZA65_RS12265	0.36	+0.1
2,621,967	+		DZA65_RS12265	0.36	+0.1
2,621,967	+		DZA65_RS12265	0.36	+0.4
2,621,967	+		DZA65_RS12265	0.36	+0.5
2,621,967	+		DZA65_RS12265	0.36	-0.7
2,621,967	+		DZA65_RS12265	0.36	+0.2
2,621,967	+		DZA65_RS12265	0.36	-0.9
2,621,967	+		DZA65_RS12265	0.36	+1.8
2,621,967	+		DZA65_RS12265	0.36	+0.1
2,621,968	-		DZA65_RS12265	0.36	+0.5
2,621,968	-		DZA65_RS12265	0.36	+0.7
2,621,968	-		DZA65_RS12265	0.36	+1.1
2,621,968	-		DZA65_RS12265	0.36	+0.1
2,621,968	-		DZA65_RS12265	0.36	+2.0
2,621,968	-		DZA65_RS12265	0.36	-0.6
2,621,968	-		DZA65_RS12265	0.36	+0.2
2,622,003	+		DZA65_RS12265	0.38	-1.2
2,622,052	+		DZA65_RS12265	0.41	+0.3
2,622,052	+		DZA65_RS12265	0.41	-0.2
2,622,052	+		DZA65_RS12265	0.41	-0.3
2,622,052	+		DZA65_RS12265	0.41	+0.1
2,622,052	+		DZA65_RS12265	0.41	+0.3
2,622,052	+		DZA65_RS12265	0.41	-2.0
2,622,053	-		DZA65_RS12265	0.41	+0.3
2,622,053	-		DZA65_RS12265	0.41	+0.3
2,622,053	-		DZA65_RS12265	0.41	+0.1
2,622,053	-		DZA65_RS12265	0.41	-0.7
2,622,053	-		DZA65_RS12265	0.41	+1.3
2,622,107	+		DZA65_RS12265	0.43	+0.1
2,622,107	+		DZA65_RS12265	0.43	+1.1
2,622,108	-		DZA65_RS12265	0.44	-0.6
2,622,108	-		DZA65_RS12265	0.44	+0.1
2,622,129	+		DZA65_RS12265	0.45	-1.2
2,622,129	+		DZA65_RS12265	0.45	-0.0
2,622,130	-		DZA65_RS12265	0.45	+0.1
2,622,130	-		DZA65_RS12265	0.45	+0.6
2,622,130	-		DZA65_RS12265	0.45	+0.3
2,622,130	-		DZA65_RS12265	0.45	+0.2
2,622,143	+		DZA65_RS12265	0.45	-2.7
2,622,143	+		DZA65_RS12265	0.45	-0.6
2,622,275	+		DZA65_RS12265	0.52	-0.8
2,622,275	+		DZA65_RS12265	0.52	+0.9
2,622,275	+		DZA65_RS12265	0.52	-0.1
2,622,276	-		DZA65_RS12265	0.52	-0.3
2,622,276	-		DZA65_RS12265	0.52	-1.1
2,622,303	+		DZA65_RS12265	0.53	-1.9
2,622,303	+		DZA65_RS12265	0.53	-0.2
2,622,304	-		DZA65_RS12265	0.53	+1.1
2,622,346	-		DZA65_RS12265	0.56	+1.0
2,622,346	-		DZA65_RS12265	0.56	+0.3
2,622,346	-		DZA65_RS12265	0.56	+0.4
2,622,600	+		DZA65_RS12265	0.68	+0.8
2,622,732	+		DZA65_RS12265	0.75	-0.5
2,622,733	-		DZA65_RS12265	0.75	-0.2
2,622,864	+		DZA65_RS12265	0.82	+0.1
2,622,864	+		DZA65_RS12265	0.82	+0.5
2,622,865	-		DZA65_RS12265	0.82	-0.7
2,622,927	+		DZA65_RS12265	0.85	+0.8
2,623,261	+				+0.5
2,623,262	-				-1.5
2,623,262	-				+0.4
2,623,265	+				+0.4
2,623,265	+				+1.0
2,623,265	+				-0.5
2,623,265	+				-0.9
2,623,266	-				+1.1
2,623,266	-				-0.8
2,623,266	-				+0.1
2,623,266	-				+1.6
2,623,266	-				+0.1
2,623,269	+				+0.2
2,623,270	-				-0.5
2,623,270	-				-0.5
2,623,345	+				-0.4
2,623,392	+				-0.0
2,623,434	-				+0.1
2,623,444	+				-1.3
2,623,445	-				+1.1
2,623,522	+				+0.4
2,623,522	+				+1.1
2,623,538	+				-2.5
2,623,568	+				+0.8
2,623,595	+				-1.2
2,623,596	-				+0.1
2,623,613	-				+1.2
2,623,626	+				-1.9
2,623,670	+				+1.0
2,623,670	+				-0.0
2,623,670	+				-2.1
2,623,671	-				+0.1
2,623,708	+				-0.0
2,623,709	-				+0.2
2,623,716	+				+0.7
2,623,717	-				-1.9
2,623,717	-				+0.8
2,623,717	-				-0.6
2,623,717	-				+0.5
2,623,749	+				-0.6
2,623,758	-				+0.6
2,623,769	-				+0.1
2,623,803	-				-1.5
2,623,803	-				+0.4
2,623,851	+		DZA65_RS12270	0.23	-1.2
2,623,870	-		DZA65_RS12270	0.29	+0.2
2,623,870	-		DZA65_RS12270	0.29	-0.6
2,623,913	+		DZA65_RS12270	0.43	-1.7
2,623,914	-		DZA65_RS12270	0.43	-0.7
2,623,939	+		DZA65_RS12270	0.52	+0.8
2,623,943	-		DZA65_RS12270	0.53	-0.7
2,623,946	-		DZA65_RS12270	0.54	-1.1
2,623,953	-		DZA65_RS12270	0.56	+0.2
2,623,993	+		DZA65_RS12270	0.69	+0.6
2,624,004	-		DZA65_RS12270	0.73	+0.6
2,624,004	-		DZA65_RS12270	0.73	-0.2
2,624,011	+		DZA65_RS12270	0.75	+0.1
2,624,012	-		DZA65_RS12270	0.75	+1.1
2,624,215	-		DZA65_RS12275	0.73	-0.0