Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12200

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,606,901	+		DZA65_RS12195	0.66	+0.8
2,606,986	-		DZA65_RS12195	0.72	-0.5
2,606,986	-		DZA65_RS12195	0.72	+0.2
2,606,986	-		DZA65_RS12195	0.72	-2.1
2,607,002	-		DZA65_RS12195	0.73	+0.1
2,607,020	-		DZA65_RS12195	0.74	-0.1
2,607,026	+		DZA65_RS12195	0.74	-0.1
2,607,027	-		DZA65_RS12195	0.74	-0.1
2,607,029	+		DZA65_RS12195	0.74	-0.0
2,607,030	-		DZA65_RS12195	0.75	+0.8
2,607,037	+		DZA65_RS12195	0.75	-0.9
2,607,037	+		DZA65_RS12195	0.75	-2.2
2,607,037	+		DZA65_RS12195	0.75	-0.6
2,607,037	+		DZA65_RS12195	0.75	+0.1
2,607,037	+		DZA65_RS12195	0.75	+0.0
2,607,037	+		DZA65_RS12195	0.75	-0.9
2,607,037	+		DZA65_RS12195	0.75	+0.4
2,607,037	+		DZA65_RS12195	0.75	-2.9
2,607,037	+		DZA65_RS12195	0.75	-0.9
2,607,037	+		DZA65_RS12195	0.75	-0.2
2,607,037	+		DZA65_RS12195	0.75	-1.8
2,607,038	-		DZA65_RS12195	0.75	-0.3
2,607,038	-		DZA65_RS12195	0.75	+0.4
2,607,038	-		DZA65_RS12195	0.75	-0.5
2,607,038	-		DZA65_RS12195	0.75	-0.9
2,607,038	-		DZA65_RS12195	0.75	+0.6
2,607,038	-		DZA65_RS12195	0.75	-0.3
2,607,042	+		DZA65_RS12195	0.75	+1.1
2,607,042	+		DZA65_RS12195	0.75	-1.5
2,607,042	+		DZA65_RS12195	0.75	-0.4
2,607,043	-		DZA65_RS12195	0.75	-1.5
2,607,043	-		DZA65_RS12195	0.75	-0.7
2,607,043	-		DZA65_RS12195	0.75	-0.7
2,607,043	-		DZA65_RS12195	0.75	-0.5
2,607,043	-		DZA65_RS12195	0.75	-0.1
2,607,055	+		DZA65_RS12195	0.76	-0.5
2,607,055	+		DZA65_RS12195	0.76	+0.6
2,607,055	+		DZA65_RS12195	0.76	-2.5
2,607,055	+		DZA65_RS12195	0.76	+0.7
2,607,055	+		DZA65_RS12195	0.76	+0.6
2,607,056	-		DZA65_RS12195	0.76	+0.4
2,607,056	-				-1.5
2,607,059	+		DZA65_RS12195	0.76	+0.1
2,607,059	+		DZA65_RS12195	0.76	+1.6
2,607,095	+		DZA65_RS12195	0.79	+0.8
2,607,095	+		DZA65_RS12195	0.79	-0.9
2,607,095	+		DZA65_RS12195	0.79	-1.5
2,607,095	+		DZA65_RS12195	0.79	+0.6
2,607,095	+		DZA65_RS12195	0.79	+0.7
2,607,095	+		DZA65_RS12195	0.79	+0.4
2,607,095	+		DZA65_RS12195	0.79	-0.6
2,607,096	-		DZA65_RS12195	0.79	-1.2
2,607,301	+				-0.6
2,607,303	+				-1.9
2,607,303	+				+0.4
2,607,303	+				-1.5
2,607,303	+				-0.7
2,607,303	+				+0.5
2,607,304	-				-1.2
2,607,304	-				-1.5
2,607,304	-				+1.7
2,607,304	-				+0.4
2,607,304	-				-0.6
2,607,304	-				-0.9
2,607,304	-				-0.2
2,607,304	-				+0.2
2,607,304	-				-0.4
2,607,356	+				-0.3
2,607,357	-				-0.1
2,607,357	-				-0.3
2,607,394	+				+0.1
2,607,394	+				-1.7
2,607,394	+				+0.0
2,607,395	-				-0.5
2,607,396	+				-0.3
2,607,396	+				-0.3
2,607,396	+				+0.5
2,607,396	+				+1.8
2,607,396	+				-0.4
2,607,396	+				-1.3
2,607,396	+				+0.0
2,607,396	+				+0.1
2,607,397	-				-0.1
2,607,397	-				-0.5
2,607,397	-				+0.1
2,607,397	-				+0.4
2,607,397	-				+1.0
2,607,398	+				-0.9
2,607,398	+				-1.0
2,607,398	+				+0.1
2,607,398	+				+2.1
2,607,398	+				+0.3
2,607,398	+				-0.5
2,607,398	+				-0.7
2,607,398	+				-1.2
2,607,398	+				-0.1
2,607,398	+				-0.1
2,607,398	+				+0.6
2,607,398	+				+1.1
2,607,398	+				+0.8
2,607,398	+				-0.2
2,607,398	+				-0.9
2,607,398	+				-0.1
2,607,398	+				+2.9
2,607,398	+				+0.4
2,607,398	+				+0.1
2,607,398	+				+0.1
2,607,398	+				+0.1
2,607,398	+				+0.3
2,607,398	+				+1.0
2,607,398	+				-0.2
2,607,398	+				-0.6
2,607,398	+				+0.7
2,607,399	-				-0.4
2,607,399	-				+0.1
2,607,399	-				-1.8
2,607,399	-				+0.1
2,607,399	-				-0.8
2,607,399	-				+0.1
2,607,399	-				+0.1
2,607,399	-				-0.1
2,607,399	-				-0.9
2,607,399	-				+0.5
2,607,399	-				+0.5
2,607,399	-				-0.9
2,607,399	-				+0.1
2,607,399	-				+0.4
2,607,399	-				+0.1
2,607,399	-				+1.1
2,607,399	-				+0.4
2,607,399	-				+0.1
2,607,399	-				+0.1
2,607,399	-				+0.1
2,607,399	-				+0.9
2,607,399	-				-0.0
2,607,399	-				+0.1
2,607,399	-				+1.6
2,607,399	-				-2.2
2,607,424	+				+0.4
2,607,424	+				-0.2
2,607,424	+				+1.1
2,607,425	-				+0.1
2,607,628	-				-0.3
2,607,632	+				-1.9
2,607,632	+				-2.9
2,607,632	+				+0.7
2,607,633	-				-0.7
2,607,670	+				+0.8
2,607,695	-				+0.1
2,607,724	-				+0.1
2,607,734	+		DZA65_RS12200	0.12	+0.2
2,607,766	+		DZA65_RS12200	0.17	+0.5
2,607,766	+		DZA65_RS12200	0.17	+0.1
2,607,767	-		DZA65_RS12200	0.18	-1.9
2,607,767	-		DZA65_RS12200	0.18	+0.1
2,607,767	-		DZA65_RS12200	0.18	+0.6
2,607,767	-		DZA65_RS12200	0.18	+1.0
2,607,804	-		DZA65_RS12200	0.24	-0.2
2,607,870	-		DZA65_RS12200	0.36	-1.9
2,608,057	+		DZA65_RS12200	0.70	-0.7
2,608,058	-		DZA65_RS12200	0.70	+0.5
2,608,071	+		DZA65_RS12200	0.72	-0.2
2,608,072	-		DZA65_RS12200	0.73	+0.4
2,608,098	+		DZA65_RS12200	0.77	+0.5
2,608,243	+				-0.1
2,608,243	+				-1.5
2,608,243	+				-1.7
2,608,459	+				-0.6
2,608,459	+				-0.5
2,608,459	+				+0.5
2,608,459	+				-0.6
2,608,459	+				-0.9
2,608,460	-				+1.2
2,608,460	-				-0.3
2,608,460	-				-0.9
2,608,499	+				+1.4
2,608,499	+				+0.1
2,608,499	+				+0.1
2,608,499	+				-0.3
2,608,499	+				+0.4
2,608,500	-				+0.2
2,608,500	-				-0.2
2,608,500	-				-1.2
2,608,500	-				+0.0
2,608,500	-				-0.3
2,608,500	-				-0.6
2,608,500	-				-1.9
2,608,500	-				-0.1
2,608,609	-				-1.9
2,609,149	+		DZA65_RS12205	0.52	+1.4
2,609,150	-		DZA65_RS12205	0.52	-0.4
2,609,150	-		DZA65_RS12205	0.52	-1.0
2,609,150	-		DZA65_RS12205	0.52	-0.7
2,609,152	+				+0.1
2,609,152	+		DZA65_RS12205	0.52	+2.4
2,609,153	-				+0.1
2,609,153	-		DZA65_RS12205	0.52	+2.7
2,609,153	-		DZA65_RS12205	0.52	+0.1