Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11360

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,415,214	-				-0.5
2,415,265	-				-0.1
2,415,265	-				+0.3
2,415,265	-				-0.1
2,415,287	+				+0.6
2,415,288	-				+0.3
2,415,288	-				+0.1
2,415,288	-				-0.3
2,415,291	+				-3.0
2,415,291	+				+0.5
2,415,292	-				+1.0
2,415,292	-				-0.6
2,415,292	-				-0.3
2,415,377	-				-0.6
2,415,400	+				-0.4
2,415,401	-				+0.5
2,415,420	+				-0.1
2,415,444	+				-0.2
2,415,445	-				+1.9
2,415,454	+				-2.2
2,415,457	+				-1.3
2,415,457	+				+0.5
2,415,458	-				-1.3
2,415,458	-				+0.5
2,415,458	-				+1.4
2,415,490	-				-0.8
2,415,490	-				-0.5
2,415,515	-				-0.7
2,415,536	+				+0.1
2,415,547	+				-0.4
2,415,547	+				-0.9
2,415,571	-		DZA65_RS11355	0.13	-0.4
2,415,578	+		DZA65_RS11355	0.14	+0.2
2,415,579	-				+0.5
2,415,600	+		DZA65_RS11355	0.18	-0.3
2,415,600	+		DZA65_RS11355	0.18	-0.7
2,415,613	+		DZA65_RS11355	0.21	+0.3
2,415,669	-		DZA65_RS11355	0.31	-0.6
2,415,693	-		DZA65_RS11355	0.36	+0.4
2,415,705	+		DZA65_RS11355	0.38	+1.4
2,415,705	+		DZA65_RS11355	0.38	-0.3
2,415,725	+		DZA65_RS11355	0.41	+0.5
2,415,726	-		DZA65_RS11355	0.42	-2.6
2,415,797	+		DZA65_RS11355	0.55	-0.2
2,415,797	+		DZA65_RS11355	0.55	-0.2
2,415,797	+		DZA65_RS11355	0.55	-0.1
2,415,798	-		DZA65_RS11355	0.55	-0.3
2,415,800	-				-1.9
2,415,800	-				-0.3
2,415,800	-		DZA65_RS11355	0.55	+0.1
2,415,823	-		DZA65_RS11355	0.60	+0.4
2,415,902	+		DZA65_RS11355	0.74	-0.7
2,415,985	+		DZA65_RS11355	0.90	-0.2
2,415,986	-		DZA65_RS11355	0.90	-0.7
2,415,988	+				-0.9
2,416,002	+				-0.1
2,416,002	+				-0.9
2,416,003	-				+0.6
2,416,003	-				+0.5
2,416,029	-				-0.2
2,416,029	-				-0.1
2,416,038	+				-0.1
2,416,039	-				-0.8
2,416,039	-				+0.4
2,416,039	-				+0.7
2,416,043	+				+0.5
2,416,095	-				-0.3
2,416,095	-				-1.1
2,416,098	-				+1.8
2,416,101	-				-0.3
2,416,101	-				+0.8
2,416,110	-				+0.6
2,416,113	+				-0.5
2,416,113	+				-0.9
2,416,114	-				+0.1
2,416,114	-				+1.4
2,416,132	+				-2.6
2,416,132	+				+1.8
2,416,132	+				-3.1
2,416,132	+				+0.2
2,416,133	-				-0.5
2,416,133	-				-0.4
2,416,133	-				+0.5
2,416,142	+				+0.1
2,416,143	-				+0.6
2,416,154	+				+0.1
2,416,154	+				-1.1
2,416,177	+				+0.1
2,416,195	+				+2.1
2,416,202	+				+0.1
2,416,222	+				-0.2
2,416,298	+		DZA65_RS11360	0.13	-0.6
2,416,298	+		DZA65_RS11360	0.13	+0.4
2,416,376	-		DZA65_RS11360	0.23	-0.4
2,416,408	-		DZA65_RS11360	0.27	-0.7
2,416,437	+		DZA65_RS11360	0.31	-2.5
2,416,437	+		DZA65_RS11360	0.31	+0.9
2,416,438	-		DZA65_RS11360	0.31	-1.8
2,416,438	-		DZA65_RS11360	0.31	-0.9
2,416,559	+		DZA65_RS11360	0.47	-0.8
2,416,559	+		DZA65_RS11360	0.47	+0.1
2,416,559	+				-1.5
2,416,560	-		DZA65_RS11360	0.47	-0.5
2,416,560	-		DZA65_RS11360	0.47	-1.2
2,416,560	-		DZA65_RS11360	0.47	-1.5
2,416,560	-		DZA65_RS11360	0.47	-0.7
2,416,560	-		DZA65_RS11360	0.47	+0.6
2,416,560	-		DZA65_RS11360	0.47	-1.0
2,416,725	+		DZA65_RS11360	0.69	-0.3
2,416,725	+		DZA65_RS11360	0.69	-1.4
2,416,725	+		DZA65_RS11360	0.69	-0.9
2,416,725	+		DZA65_RS11360	0.69	-0.8
2,416,725	+		DZA65_RS11360	0.69	-2.9
2,416,725	+		DZA65_RS11360	0.69	-1.3
2,416,809	+		DZA65_RS11360	0.80	-2.2
2,416,809	+		DZA65_RS11360	0.80	-0.2
2,416,890	+				+0.9
2,416,890	+				-0.9
2,416,890	+				-0.5
2,416,890	+				-0.6
2,416,890	+				+0.3
2,416,890	+				+0.4
2,416,890	+				+0.1
2,416,891	-				+0.2
2,416,891	-				-0.9
2,416,891	-				-2.2
2,416,891	-				-0.2
2,416,891	-				+0.1
2,416,891	-				-0.1
2,416,946	+				+1.3
2,416,947	-				+0.1
2,416,953	+				-0.2
2,416,954	-				-0.4
2,416,995	+				-0.3
2,416,995	+				+1.8
2,417,043	+				+0.6
2,417,044	-				+0.3
2,417,044	-				-0.7
2,417,044	-				+0.4
2,417,049	+				+0.1
2,417,050	-				-0.9
2,417,050	-				-1.3
2,417,050	-				+0.1
2,417,088	+				-2.2
2,417,089	-				+0.5
2,417,089	-				+0.5
2,417,089	-				-0.2
2,417,098	+				-1.2
2,417,098	+				-2.4
2,417,098	+				-0.1
2,417,099	-				+0.9
2,417,099	-				+0.9
2,417,114	+				-0.2
2,417,114	+				-0.5
2,417,114	+				-0.1
2,417,115	-				+0.1
2,417,115	-				-0.4
2,417,115	-				+0.1
2,417,115	-				+0.1
2,417,115	-				+0.3
2,417,119	-				-0.7
2,417,119	-				-0.9
2,417,128	-				+0.3
2,417,164	+				+0.3
2,417,165	-				-0.4
2,417,208	+		DZA65_RS11365	0.12	-0.9
2,417,208	+		DZA65_RS11365	0.12	+0.1
2,417,208	+		DZA65_RS11365	0.12	+0.1
2,417,209	-		DZA65_RS11365	0.12	+0.1
2,417,212	+		DZA65_RS11365	0.13	-0.3
2,417,212	+		DZA65_RS11365	0.13	-0.4
2,417,213	-		DZA65_RS11365	0.13	-0.9
2,417,261	+		DZA65_RS11365	0.18	+1.7
2,417,261	+		DZA65_RS11365	0.18	+0.7
2,417,262	-		DZA65_RS11365	0.18	-0.3
2,417,262	-		DZA65_RS11365	0.18	+0.1
2,417,262	-		DZA65_RS11365	0.18	-0.4
2,417,316	+		DZA65_RS11365	0.23	+1.4
2,417,316	+		DZA65_RS11365	0.23	-0.5
2,417,316	+		DZA65_RS11365	0.23	+0.4
2,417,317	-		DZA65_RS11365	0.24	+0.3
2,417,317	-		DZA65_RS11365	0.24	-0.7
2,417,317	-		DZA65_RS11365	0.24	+0.7
2,417,317	-				+2.4
2,417,317	-		DZA65_RS11365	0.24	+0.2
2,417,320	+		DZA65_RS11365	0.24	+0.7
2,417,320	+		DZA65_RS11365	0.24	+0.6
2,417,320	+		DZA65_RS11365	0.24	+0.6
2,417,321	-		DZA65_RS11365	0.24	+0.5
2,417,321	-		DZA65_RS11365	0.24	+0.9
2,417,321	-		DZA65_RS11365	0.24	+0.3
2,417,321	-		DZA65_RS11365	0.24	+2.9
2,417,321	-		DZA65_RS11365	0.24	+0.7
2,417,323	+		DZA65_RS11365	0.24	-1.4
2,417,324	-		DZA65_RS11365	0.24	-0.5
2,417,324	-		DZA65_RS11365	0.24	-0.9
2,417,324	-		DZA65_RS11365	0.24	+0.2
2,417,324	-		DZA65_RS11365	0.24	+0.9
2,417,377	+		DZA65_RS11365	0.30	-0.2
2,417,377	+		DZA65_RS11365	0.30	-0.1
2,417,377	+		DZA65_RS11365	0.30	+0.5
2,417,377	+		DZA65_RS11365	0.30	+0.9
2,417,378	-		DZA65_RS11365	0.30	+0.2
2,417,420	+		DZA65_RS11365	0.34	+0.3
2,417,420	+		DZA65_RS11365	0.34	-0.1
2,417,420	+		DZA65_RS11365	0.34	+0.5
2,417,421	-		DZA65_RS11365	0.34	-0.6
2,417,421	-		DZA65_RS11365	0.34	+0.8
2,417,421	-		DZA65_RS11365	0.34	-1.3
2,417,421	-		DZA65_RS11365	0.34	-0.6
2,417,492	+		DZA65_RS11365	0.42	+0.3
2,417,492	+		DZA65_RS11365	0.42	-1.5
2,417,493	-		DZA65_RS11365	0.42	+0.4
2,417,493	-		DZA65_RS11365	0.42	+0.6
2,417,496	+		DZA65_RS11365	0.42	+0.3
2,417,496	+		DZA65_RS11365	0.42	+0.9
2,417,496	+		DZA65_RS11365	0.42	-1.6
2,417,496	+		DZA65_RS11365	0.42	-0.3
2,417,496	+		DZA65_RS11365	0.42	+0.3
2,417,496	+		DZA65_RS11365	0.42	+0.9
2,417,496	+		DZA65_RS11365	0.42	+1.1
2,417,496	+		DZA65_RS11365	0.42	+1.2
2,417,496	+		DZA65_RS11365	0.42	+0.5
2,417,497	-		DZA65_RS11365	0.42	+0.7
2,417,497	-		DZA65_RS11365	0.42	-0.8
2,417,522	+		DZA65_RS11365	0.45	+1.0
2,417,523	-		DZA65_RS11365	0.45	-0.1
2,417,523	-		DZA65_RS11365	0.45	-0.9
2,417,590	+		DZA65_RS11365	0.52	+0.3
2,417,591	-		DZA65_RS11365	0.52	+0.5
2,417,700	+		DZA65_RS11365	0.63	+0.5
2,417,737	+		DZA65_RS11365	0.67	-0.1
2,417,738	-		DZA65_RS11365	0.67	-2.7
2,417,952	+		DZA65_RS11365	0.89	-0.2