Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11255

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,386,902	+				+1.5
2,386,902	+				+1.1
2,386,902	+				+0.8
2,386,903	-				+0.0
2,386,903	-				+0.4
2,386,903	-				+0.1
2,386,903	-				-0.9
2,386,903	-				-0.4
2,386,918	+				-0.2
2,386,939	-				-1.1
2,386,956	+				+0.2
2,386,956	+				-0.1
2,387,106	-				-0.9
2,387,123	+				-0.5
2,387,124	-				+0.9
2,387,193	+		DZA65_RS22890	0.16	-0.3
2,387,193	+		DZA65_RS22890	0.16	+0.1
2,387,193	+		DZA65_RS22890	0.16	+0.4
2,387,193	+		DZA65_RS22890	0.16	+1.2
2,387,193	+		DZA65_RS22890	0.16	+0.1
2,387,193	+		DZA65_RS22890	0.16	+1.1
2,387,194	-		DZA65_RS22890	0.17	+1.4
2,387,194	-		DZA65_RS22890	0.17	+0.7
2,387,237	+		DZA65_RS22890	0.34	+0.9
2,387,272	-		DZA65_RS22890	0.48	+0.2
2,387,274	-		DZA65_RS22890	0.49	-0.3
2,387,315	+		DZA65_RS22890	0.65	-0.5
2,387,315	+		DZA65_RS22890	0.65	-2.2
2,387,316	-		DZA65_RS22890	0.66	+0.9
2,387,317	+		DZA65_RS22890	0.66	+0.9
2,387,317	+		DZA65_RS22890	0.66	+0.4
2,387,318	-		DZA65_RS22890	0.67	+1.7
2,387,318	-		DZA65_RS22890	0.67	-1.5
2,387,318	-		DZA65_RS22890	0.67	+0.0
2,387,328	+		DZA65_RS22890	0.71	+0.5
2,387,328	+		DZA65_RS22890	0.71	+0.0
2,387,329	-		DZA65_RS22890	0.71	-0.1
2,387,329	-		DZA65_RS22890	0.71	+0.5
2,387,352	+		DZA65_RS22890	0.80	-1.2
2,387,353	-		DZA65_RS22890	0.81	-0.2
2,387,353	-		DZA65_RS22890	0.81	+0.8
2,387,353	-		DZA65_RS22890	0.81	+0.2
2,387,355	-		DZA65_RS22890	0.82	-1.4
2,387,364	-		DZA65_RS22890	0.85	+0.1
2,387,419	+				-0.1
2,387,466	+				-0.7
2,387,466	+				-2.2
2,387,466	+				-0.7
2,387,467	-				+2.4
2,387,475	+				-0.3
2,387,475	+				-0.2
2,387,476	-				-0.2
2,387,477	+				-0.9
2,387,477	+				+0.4
2,387,477	+				-0.2
2,387,477	+				+0.8
2,387,477	+				-0.2
2,387,477	+				-0.7
2,387,478	-				-0.3
2,387,478	-				+1.5
2,387,478	-				+0.5
2,387,478	-				-0.9
2,387,478	-				+1.9
2,387,478	-				-0.9
2,387,478	-				+0.6
2,387,478	-				-0.2
2,387,478	-				-0.1
2,387,478	-				+0.9
2,387,478	-				+0.3
2,387,478	-				+0.8
2,387,480	-				+0.3
2,387,488	+				-0.3
2,387,488	+				+0.8
2,387,489	-				+0.4
2,387,532	-				+1.3
2,387,563	-				-0.6
2,387,585	-				-0.6
2,387,625	-				+0.7
2,387,625	-				+1.4
2,387,625	-				+0.3
2,387,636	-				-0.5
2,387,636	-				-0.7
2,387,649	+				+1.1
2,387,688	+				+1.2
2,387,689	-				+0.1
2,387,689	-				-0.7
2,387,693	+				-0.3
2,387,693	+				+0.3
2,387,694	-				+0.1
2,387,694	-				-2.2
2,387,793	-				+1.1
2,387,828	-				-1.1
2,387,848	-				+0.8
2,387,941	+		DZA65_RS11255	0.15	+0.1
2,387,941	+		DZA65_RS11255	0.15	-0.4
2,387,942	-		DZA65_RS11255	0.15	-0.5
2,387,942	-		DZA65_RS11255	0.15	-0.7
2,388,012	+		DZA65_RS11255	0.24	-0.9
2,388,012	+		DZA65_RS11255	0.24	-3.6
2,388,012	+		DZA65_RS11255	0.24	-0.8
2,388,012	+		DZA65_RS11255	0.24	-1.5
2,388,012	+		DZA65_RS11255	0.24	-0.5
2,388,013	-		DZA65_RS11255	0.24	-0.7
2,388,013	-		DZA65_RS11255	0.24	-0.3
2,388,013	-		DZA65_RS11255	0.24	-0.5
2,388,013	-		DZA65_RS11255	0.24	-1.7
2,388,013	-		DZA65_RS11255	0.24	-1.0
2,388,013	-				+1.1
2,388,013	-		DZA65_RS11255	0.24	+0.4
2,388,013	-		DZA65_RS11255	0.24	-0.1
2,388,013	-		DZA65_RS11255	0.24	+0.4
2,388,013	-		DZA65_RS11255	0.24	-1.3
2,388,069	+		DZA65_RS11255	0.30	-0.7
2,388,070	-		DZA65_RS11255	0.30	+0.6
2,388,070	-		DZA65_RS11255	0.30	-0.4
2,388,070	-		DZA65_RS11255	0.30	+0.9
2,388,070	-		DZA65_RS11255	0.30	+1.1
2,388,076	+		DZA65_RS11255	0.31	+0.4
2,388,117	-		DZA65_RS11255	0.36	-0.7
2,388,117	-		DZA65_RS11255	0.36	+0.8
2,388,117	-		DZA65_RS11255	0.36	-1.1
2,388,147	+		DZA65_RS11255	0.39	+0.3
2,388,237	+		DZA65_RS11255	0.50	-2.1
2,388,237	+		DZA65_RS11255	0.50	-1.7
2,388,237	+		DZA65_RS11255	0.50	-0.2
2,388,248	-		DZA65_RS11255	0.51	-1.1
2,388,249	+		DZA65_RS11255	0.51	-1.1
2,388,250	-		DZA65_RS11255	0.51	+0.1
2,388,344	-		DZA65_RS11255	0.62	-0.8
2,388,366	+		DZA65_RS11255	0.65	+0.1
2,388,366	+		DZA65_RS11255	0.65	+0.9
2,388,367	-		DZA65_RS11255	0.65	-0.2
2,388,511	-		DZA65_RS11255	0.82	-1.1
2,388,511	-		DZA65_RS11255	0.82	+1.2
2,388,530	+		DZA65_RS11255	0.84	+0.6
2,388,530	+		DZA65_RS11255	0.84	-0.5
2,388,531	-		DZA65_RS11255	0.84	-1.1
2,388,531	-		DZA65_RS11255	0.84	-0.1
2,388,531	-		DZA65_RS11255	0.84	-0.3
2,388,531	-		DZA65_RS11255	0.84	-2.2
2,388,531	-		DZA65_RS11255	0.84	+0.1
2,388,531	-		DZA65_RS11255	0.84	+0.5
2,388,531	-		DZA65_RS11255	0.84	+0.7
2,388,551	-		DZA65_RS11255	0.86	-0.5
2,388,685	-				+0.1
2,388,694	+				+1.7
2,388,694	+				-1.1
2,388,694	+				-0.1
2,388,700	+				+0.9
2,388,714	+				-0.5
2,388,776	+				+0.3
2,388,776	+				+0.7
2,388,776	+				+0.3
2,388,776	+				-0.2
2,388,776	+				-0.9
2,388,776	+				-0.6
2,388,776	+				-1.5
2,388,777	-				+0.5
2,388,777	-				+0.1
2,388,777	-				+0.8
2,388,777	-				+1.7
2,388,777	-				+0.3
2,388,777	-				-0.3
2,388,795	+				-2.4
2,388,828	-				-2.1
2,388,895	+				-1.7
2,388,896	-				+0.2
2,388,896	-				+0.6
2,388,919	+				+0.1
2,388,940	+				-0.9
2,388,941	-				-0.2
2,388,948	-				-0.7
2,388,978	+				-1.9
2,388,978	+				+0.7
2,388,978	+				+0.0
2,388,978	+				+1.4
2,388,988	-				-0.6
2,388,988	-				+0.2
2,388,988	-				-1.7
2,389,002	+				-1.1
2,389,002	+				+0.2
2,389,002	+				+0.1
2,389,002	+				+0.8
2,389,006	+				-0.1
2,389,007	-				-0.7
2,389,030	+				+0.0
2,389,031	-				-1.8
2,389,031	-				-0.2
2,389,033	-				-0.3
2,389,043	-				+1.5
2,389,073	-				-0.1
2,389,105	-				+0.6
2,389,110	+				-2.4
2,389,111	-				+1.1
2,389,125	+				+1.4
2,389,166	+				-2.9
2,389,167	-				-0.4
2,389,167	-				-1.9
2,389,167	-				+0.3
2,389,185	+				-1.9
2,389,186	-				-0.3
2,389,249	+		DZA65_RS11260	0.12	+1.1
2,389,249	+		DZA65_RS11260	0.12	+1.5
2,389,249	+		DZA65_RS11260	0.12	-0.2
2,389,249	+		DZA65_RS11260	0.12	+0.8
2,389,249	+		DZA65_RS11260	0.12	+0.5
2,389,249	+		DZA65_RS11260	0.12	+0.9
2,389,249	+		DZA65_RS11260	0.12	-0.5
2,389,250	-		DZA65_RS11260	0.12	-0.8
2,389,250	-		DZA65_RS11260	0.12	+0.7
2,389,250	-		DZA65_RS11260	0.12	-1.2
2,389,250	-		DZA65_RS11260	0.12	+0.3
2,389,250	-		DZA65_RS11260	0.12	-0.4
2,389,250	-		DZA65_RS11260	0.12	+0.1
2,389,277	+		DZA65_RS11260	0.14	+1.0
2,389,277	+		DZA65_RS11260	0.14	+0.3
2,389,277	+		DZA65_RS11260	0.14	+0.6
2,389,300	-		DZA65_RS11260	0.16	-1.6
2,389,300	-		DZA65_RS11260	0.16	-1.1
2,389,300	-		DZA65_RS11260	0.16	-1.2
2,389,300	-		DZA65_RS11260	0.16	+0.3
2,389,361	+		DZA65_RS11260	0.20	-0.0
2,389,362	-		DZA65_RS11260	0.20	+0.7
2,389,384	+		DZA65_RS11260	0.22	+0.9
2,389,478	+		DZA65_RS11260	0.29	-0.6
2,389,478	+		DZA65_RS11260	0.29	-0.1
2,389,478	+		DZA65_RS11260	0.29	-1.3
2,389,479	-		DZA65_RS11260	0.29	+1.8
2,389,479	-		DZA65_RS11260	0.29	+0.8