Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10730

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,269,352	+		DZA65_RS10725	0.28	+1.3
2,269,403	+		DZA65_RS10725	0.32	+0.7
2,269,403	+		DZA65_RS10725	0.32	-0.1
2,269,403	+		DZA65_RS10725	0.32	+0.9
2,269,403	+		DZA65_RS10725	0.32	+0.5
2,269,403	+		DZA65_RS10725	0.32	-2.2
2,269,403	+		DZA65_RS10725	0.32	+2.0
2,269,403	+		DZA65_RS10725	0.32	+0.7
2,269,403	+		DZA65_RS10725	0.32	-0.5
2,269,403	+		DZA65_RS10725	0.32	+0.5
2,269,403	+		DZA65_RS10725	0.32	+0.6
2,269,403	+		DZA65_RS10725	0.32	+0.7
2,269,403	+		DZA65_RS10725	0.32	-0.3
2,269,404	-		DZA65_RS10725	0.32	-0.3
2,269,404	-		DZA65_RS10725	0.32	-0.6
2,269,404	-		DZA65_RS10725	0.32	+2.0
2,269,404	-		DZA65_RS10725	0.32	-0.6
2,269,404	-		DZA65_RS10725	0.32	+0.7
2,269,404	-		DZA65_RS10725	0.32	+0.1
2,269,404	-		DZA65_RS10725	0.32	+0.3
2,269,404	-		DZA65_RS10725	0.32	-0.9
2,269,404	-		DZA65_RS10725	0.32	+1.1
2,269,404	-		DZA65_RS10725	0.32	-0.1
2,269,424	+		DZA65_RS10725	0.33	+0.4
2,269,445	+		DZA65_RS10725	0.35	+0.1
2,269,445	+		DZA65_RS10725	0.35	-0.2
2,269,445	+		DZA65_RS10725	0.35	-0.2
2,269,445	+		DZA65_RS10725	0.35	+0.4
2,269,445	+		DZA65_RS10725	0.35	+2.4
2,269,445	+		DZA65_RS10725	0.35	-0.2
2,269,445	+		DZA65_RS10725	0.35	+0.6
2,269,445	+		DZA65_RS10725	0.35	-0.5
2,269,446	-		DZA65_RS10725	0.35	+0.1
2,269,446	-		DZA65_RS10725	0.35	+1.8
2,269,446	-		DZA65_RS10725	0.35	+0.3
2,269,457	+		DZA65_RS10725	0.36	+0.9
2,269,457	+		DZA65_RS10725	0.36	-1.6
2,269,457	+		DZA65_RS10725	0.36	+1.6
2,269,458	-				+2.7
2,269,559	+		DZA65_RS10725	0.44	-1.2
2,269,568	+		DZA65_RS10725	0.45	-0.2
2,269,568	+		DZA65_RS10725	0.45	-0.2
2,269,690	+		DZA65_RS10725	0.54	-1.6
2,269,777	+		DZA65_RS10725	0.61	+0.5
2,269,778	-		DZA65_RS10725	0.61	-1.5
2,269,783	-		DZA65_RS10725	0.62	+0.5
2,269,785	+		DZA65_RS10725	0.62	+0.9
2,269,785	+		DZA65_RS10725	0.62	-0.2
2,269,785	+		DZA65_RS10725	0.62	+0.7
2,269,812	-		DZA65_RS10725	0.64	+0.3
2,269,832	+		DZA65_RS10725	0.65	+1.6
2,269,905	-		DZA65_RS10725	0.71	-0.5
2,269,905	-		DZA65_RS10725	0.71	-0.3
2,270,047	+		DZA65_RS10725	0.82	-1.9
2,270,047	+		DZA65_RS10725	0.82	+1.8
2,270,048	-		DZA65_RS10725	0.82	-0.1
2,270,048	-		DZA65_RS10725	0.82	-0.8
2,270,048	-		DZA65_RS10725	0.82	-0.6
2,270,048	-		DZA65_RS10725	0.82	+0.9
2,270,113	-		DZA65_RS10725	0.88	-0.2
2,270,118	+		DZA65_RS10725	0.88	+1.0
2,270,118	+		DZA65_RS10725	0.88	+0.8
2,270,118	+		DZA65_RS10725	0.88	+0.0
2,270,118	+		DZA65_RS10725	0.88	+0.5
2,270,118	+		DZA65_RS10725	0.88	+0.4
2,270,118	+		DZA65_RS10725	0.88	+0.9
2,270,119	-		DZA65_RS10725	0.88	+0.6
2,270,182	+				-1.9
2,270,182	+				-0.2
2,270,182	+				+3.0
2,270,183	-				+0.4
2,270,195	+				+0.2
2,270,196	-				-0.2
2,270,264	+				+1.6
2,270,265	-				+0.4
2,270,289	+				+0.6
2,270,289	+				+0.0
2,270,289	+				+1.6
2,270,289	+				-1.5
2,270,289	+				-0.6
2,270,290	-				+0.1
2,270,290	-				-0.1
2,270,290	-				-2.4
2,270,290	-				+1.1
2,270,301	+				-0.0
2,270,301	+				+0.3
2,270,301	+				-0.1
2,270,301	+				+0.5
2,270,301	+				-0.3
2,270,302	-				-0.6
2,270,302	-				-0.5
2,270,302	-				+0.2
2,270,333	+				+0.3
2,270,333	+				-0.5
2,270,334	-				+0.4
2,270,334	-				+0.9
2,270,334	-				+0.4
2,270,334	-				+2.3
2,270,499	+				+1.1
2,270,513	+		DZA65_RS10730	0.11	+0.1
2,270,608	-		DZA65_RS10730	0.16	-0.9
2,270,717	+		DZA65_RS10730	0.21	-0.3
2,270,717	+		DZA65_RS10730	0.21	+0.7
2,270,726	+		DZA65_RS10730	0.22	+0.8
2,270,726	+		DZA65_RS10730	0.22	-0.9
2,270,760	-		DZA65_RS10730	0.23	+0.3
2,270,760	-		DZA65_RS10730	0.23	-0.6
2,270,771	+		DZA65_RS10730	0.24	+1.6
2,270,796	+		DZA65_RS10730	0.25	-0.1
2,270,807	+		DZA65_RS10730	0.26	+0.7
2,270,822	+		DZA65_RS10730	0.27	-0.3
2,270,900	+		DZA65_RS10730	0.31	+1.2
2,270,900	+		DZA65_RS10730	0.31	-0.3
2,270,900	+		DZA65_RS10730	0.31	+1.6
2,271,017	+		DZA65_RS10730	0.37	-1.2
2,271,080	+		DZA65_RS10730	0.40	-0.0
2,271,080	+		DZA65_RS10730	0.40	+1.2
2,271,080	+		DZA65_RS10730	0.40	+1.1
2,271,080	+		DZA65_RS10730	0.40	+1.2
2,271,080	+		DZA65_RS10730	0.40	+1.2
2,271,080	+		DZA65_RS10730	0.40	+1.1
2,271,080	+		DZA65_RS10730	0.40	+1.3
2,271,080	+		DZA65_RS10730	0.40	-0.9
2,271,080	+		DZA65_RS10730	0.40	-0.6
2,271,081	-		DZA65_RS10730	0.40	-0.2
2,271,081	-		DZA65_RS10730	0.40	+0.9
2,271,081	-		DZA65_RS10730	0.40	-0.9
2,271,081	-		DZA65_RS10730	0.40	+0.1
2,271,099	-		DZA65_RS10730	0.41	+0.1
2,271,099	-		DZA65_RS10730	0.41	-0.0
2,271,099	-		DZA65_RS10730	0.41	-1.5
2,271,102	+		DZA65_RS10730	0.41	+1.2
2,271,251	+		DZA65_RS10730	0.49	+0.6
2,271,252	-		DZA65_RS10730	0.49	+0.4
2,271,269	+		DZA65_RS10730	0.50	+0.2
2,271,269	+		DZA65_RS10730	0.50	-0.5
2,271,269	+		DZA65_RS10730	0.50	+1.1
2,271,269	+		DZA65_RS10730	0.50	+1.2
2,271,269	+		DZA65_RS10730	0.50	+0.6
2,271,269	+		DZA65_RS10730	0.50	+0.5
2,271,269	+		DZA65_RS10730	0.50	+0.1
2,271,392	+		DZA65_RS10730	0.56	-0.6
2,271,393	-		DZA65_RS10730	0.56	+1.7
2,271,393	-		DZA65_RS10730	0.56	+0.8
2,271,393	-		DZA65_RS10730	0.56	+0.9
2,271,393	-		DZA65_RS10730	0.56	-0.1
2,271,393	-				+1.7
2,271,393	-		DZA65_RS10730	0.56	+1.7
2,271,504	-		DZA65_RS10730	0.62	+1.1
2,271,667	-		DZA65_RS10730	0.70	+0.1
2,271,667	-		DZA65_RS10730	0.70	+0.7
2,271,667	-		DZA65_RS10730	0.70	-0.9
2,271,732	-		DZA65_RS10730	0.74	-0.1
2,271,749	+		DZA65_RS10730	0.74	+1.3
2,271,750	-		DZA65_RS10730	0.75	+0.4
2,271,750	-		DZA65_RS10730	0.75	+1.2
2,271,845	+		DZA65_RS10730	0.79	-0.5
2,271,845	+		DZA65_RS10730	0.79	-0.3
2,271,846	-		DZA65_RS10730	0.79	-0.2
2,271,897	+		DZA65_RS10730	0.82	-0.7
2,271,898	-		DZA65_RS10730	0.82	+0.3
2,271,898	-		DZA65_RS10730	0.82	-2.7
2,271,923	+		DZA65_RS10730	0.83	-0.6
2,271,923	+		DZA65_RS10730	0.83	+0.5
2,272,002	+		DZA65_RS10730	0.88	+0.7
2,272,002	+		DZA65_RS10730	0.88	+1.5
2,272,007	+		DZA65_RS10730	0.88	+0.4
2,272,007	+		DZA65_RS10730	0.88	+1.3
2,272,007	+		DZA65_RS10730	0.88	+0.1
2,272,007	+		DZA65_RS10730	0.88	+0.4
2,272,007	+		DZA65_RS10730	0.88	+0.7
2,272,007	+		DZA65_RS10730	0.88	-0.4
2,272,008	-		DZA65_RS10730	0.88	+0.1
2,272,008	-		DZA65_RS10730	0.88	+0.8
2,272,008	-		DZA65_RS10730	0.88	-0.1
2,272,008	-		DZA65_RS10730	0.88	-0.4
2,272,008	-		DZA65_RS10730	0.88	-0.7
2,272,008	-				+0.1
2,272,008	-		DZA65_RS10730	0.88	+1.1
2,272,008	-		DZA65_RS10730	0.88	+0.1
2,272,008	-		DZA65_RS10730	0.88	+0.5
2,272,092	+				+0.8
2,272,092	+				+1.0
2,272,092	+				+1.2
2,272,092	+				+0.5
2,272,092	+				+0.1
2,272,093	-				+0.1
2,272,093	-				-1.9
2,272,139	+				+0.3
2,272,139	+				-0.3
2,272,140	-				-0.2
2,272,140	-				+0.1
2,272,140	-				+1.1
2,272,140	-				-0.1
2,272,140	-				+1.1
2,272,168	-				+0.2
2,272,168	-				+0.9
2,272,234	+				+0.6
2,272,234	+				+0.2
2,272,234	+				-0.2
2,272,234	+				-0.6
2,272,235	-				+0.0
2,272,242	+				-1.2
2,272,243	-				+0.1
2,272,243	-				-0.2
2,272,276	+				+0.4
2,272,276	+				-2.3
2,272,276	+				+1.0
2,272,276	+				+0.5
2,272,277	-				+0.0
2,272,277	-				-0.4
2,272,277	-				-0.8
2,272,277	-				+1.1
2,272,289	+				-0.5
2,272,291	+				+0.4
2,272,291	+				-1.2
2,272,291	+				+0.1
2,272,291	+				-0.5
2,272,295	+				+0.4
2,272,295	+				+0.8
2,272,295	+				+1.0
2,272,295	+				-0.1
2,272,295	+				-0.2
2,272,295	+				-0.5
2,272,295	+				-0.4
2,272,295	+				-1.8
2,272,295	+				+0.3
2,272,295	+				-0.2
2,272,295	+				+0.2
2,272,295	+				+1.1
2,272,295	+				+0.9
2,272,296	-				+1.7
2,272,296	-				-1.3
2,272,296	-				+0.7
2,272,296	-				+0.2
2,272,296	-				+1.1
2,272,296	-				-0.2
2,272,296	-				+0.5
2,272,296	-				+0.7
2,272,296	-				-0.2
2,272,296	-				+1.1
2,272,296	-				-0.5
2,272,296	-				+0.6
2,272,296	-				+0.5
2,272,297	+				+0.3
2,272,297	+				+1.1
2,272,297	+				+1.3
2,272,298	-				+0.7
2,272,298	-				-0.5
2,272,298	-				-0.3
2,272,298	-				-0.1
2,272,306	+				-0.5
2,272,306	+				+0.3
2,272,306	+				+0.6
2,272,306	+				-0.0
2,272,307	-				-0.9
2,272,338	+				+1.1
2,272,339	-				+2.8
2,272,346	+				+1.6
2,272,347	-				+0.8
2,272,347	-				+0.4
2,272,359	-				+0.1
2,272,359	-				-1.5
2,272,442	-				+1.0
2,272,537	-				-1.8
2,272,589	+				+0.1
2,272,589	+				-1.1
2,272,589	+				+0.6
2,272,589	+				-0.2
2,272,589	+				-0.2
2,272,590	-				+0.6
2,272,594	+				+0.1
2,272,594	+				+0.4
2,272,594	+				+0.7
2,272,594	+				-0.4
2,272,594	+				-0.3
2,272,594	+				-0.5
2,272,594	+				-0.5
2,272,594	+				-0.6
2,272,594	+				+0.3
2,272,594	+				+0.7
2,272,595	-				-1.4
2,272,595	-				+0.5
2,272,595	-				+0.4
2,272,595	-				-0.1
2,272,595	-				-0.2
2,272,595	-				+0.2
2,272,610	+				-1.5
2,272,610	+				+1.4
2,272,610	+				+1.3
2,272,611	-				-2.1
2,272,611	-				-3.2
2,272,620	+				-1.9
2,272,620	+				-0.4
2,272,620	+				+0.7
2,272,620	+				-1.5
2,272,621	-				+0.9
2,272,621	-				+1.4
2,272,621	-				+0.3
2,272,621	-				+0.1
2,272,621	-				+0.5
2,272,621	-				-1.3
2,272,621	-				+0.7
2,272,624	+				-0.1
2,272,624	+				+0.1
2,272,624	+				-1.1
2,272,625	-				-0.7
2,272,625	-				+0.8
2,272,625	-				-1.4
2,272,663	+				-0.4
2,272,663	+				+0.1
2,272,664	-				-0.5
2,272,664	-				+2.6
2,272,667	+				-0.3
2,272,705	+				+0.5
2,272,709	-				+1.4
2,272,801	+		DZA65_RS10735	0.15	-1.0
2,272,801	+		DZA65_RS10735	0.15	+0.3
2,272,802	-		DZA65_RS10735	0.15	-0.3
2,272,802	-		DZA65_RS10735	0.15	+1.5
2,272,802	-		DZA65_RS10735	0.15	+0.6
2,272,803	+		DZA65_RS10735	0.15	+0.8
2,272,803	+		DZA65_RS10735	0.15	+0.9
2,272,867	-		DZA65_RS10735	0.24	-0.0
2,272,890	+		DZA65_RS10735	0.27	-1.1
2,272,893	+		DZA65_RS10735	0.27	-1.0
2,272,893	+		DZA65_RS10735	0.27	+0.9
2,272,894	-		DZA65_RS10735	0.27	+1.4
2,272,894	-		DZA65_RS10735	0.27	+1.0
2,272,894	-		DZA65_RS10735	0.27	-0.1
2,272,935	+		DZA65_RS10735	0.33	+0.6
2,272,935	+		DZA65_RS10735	0.33	+1.1
2,272,936	-		DZA65_RS10735	0.33	+0.4
2,272,938	+		DZA65_RS10735	0.33	+0.1
2,272,938	+		DZA65_RS10735	0.33	-0.3
2,272,938	+		DZA65_RS10735	0.33	+1.1
2,272,938	+		DZA65_RS10735	0.33	-0.1
2,272,939	-		DZA65_RS10735	0.33	+0.7
2,272,939	-		DZA65_RS10735	0.33	+0.7
2,272,939	-		DZA65_RS10735	0.33	-0.7
2,272,939	-		DZA65_RS10735	0.33	+0.4
2,272,939	-		DZA65_RS10735	0.33	-0.4
2,272,939	-		DZA65_RS10735	0.33	+0.8
2,273,037	+		DZA65_RS10735	0.46	-0.6
2,273,121	+		DZA65_RS10735	0.58	+1.6
2,273,121	+		DZA65_RS10735	0.58	+0.3
2,273,127	+		DZA65_RS10735	0.58	-0.3
2,273,167	+		DZA65_RS10735	0.64	+0.3
2,273,202	+		DZA65_RS10735	0.69	-3.2
2,273,202	+		DZA65_RS10735	0.69	+0.5
2,273,205	+		DZA65_RS10735	0.69	-0.0
2,273,205	+		DZA65_RS10735	0.69	+0.6
2,273,205	+		DZA65_RS10735	0.69	-0.3
2,273,205	+		DZA65_RS10735	0.69	-1.1
2,273,205	+		DZA65_RS10735	0.69	-0.0
2,273,205	+		DZA65_RS10735	0.69	-1.1
2,273,206	-		DZA65_RS10735	0.69	-1.2
2,273,206	-		DZA65_RS10735	0.69	-0.3
2,273,206	-		DZA65_RS10735	0.69	-1.4
2,273,206	-		DZA65_RS10735	0.69	-0.2
2,273,206	-		DZA65_RS10735	0.69	+0.3
2,273,206	-		DZA65_RS10735	0.69	-0.1
2,273,206	-		DZA65_RS10735	0.69	-0.2
2,273,206	-		DZA65_RS10735	0.69	-3.2
2,273,206	-		DZA65_RS10735	0.69	+0.6
2,273,208	+		DZA65_RS10735	0.69	-0.6
2,273,208	+		DZA65_RS10735	0.69	+0.3
2,273,209	-		DZA65_RS10735	0.69	+0.3
2,273,209	-		DZA65_RS10735	0.69	-1.5
2,273,209	-				+0.1
2,273,209	-		DZA65_RS10735	0.69	+1.1