Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07750

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,610,855	+		DZA65_RS07740	0.58	-0.3
1,610,856	-		DZA65_RS07740	0.58	+0.6
1,610,856	-		DZA65_RS07740	0.58	-1.4
1,610,877	+		DZA65_RS07740	0.59	+0.3
1,611,095	+		DZA65_RS07740	0.76	-0.3
1,611,095	+		DZA65_RS07740	0.76	+0.9
1,611,096	-		DZA65_RS07740	0.76	+0.3
1,611,096	-		DZA65_RS07740	0.76	-0.7
1,611,096	-		DZA65_RS07740	0.76	-0.1
1,611,163	+		DZA65_RS07740	0.82	-0.4
1,611,164	-		DZA65_RS07740	0.82	-0.5
1,611,164	-		DZA65_RS07740	0.82	+0.1
1,611,221	+		DZA65_RS07740	0.86	+0.5
1,611,221	+		DZA65_RS07740	0.86	-0.5
1,611,221	+		DZA65_RS07740	0.86	-0.3
1,611,221	+		DZA65_RS07740	0.86	+0.1
1,611,221	+		DZA65_RS07740	0.86	-0.7
1,611,221	+		DZA65_RS07740	0.86	-0.5
1,611,221	+		DZA65_RS07740	0.86	+0.8
1,611,222	-		DZA65_RS07740	0.86	+1.4
1,611,231	+		DZA65_RS07740	0.87	-1.0
1,611,231	+		DZA65_RS07740	0.87	+0.6
1,611,235	+		DZA65_RS07740	0.87	+1.4
1,611,235	+		DZA65_RS07740	0.87	+0.5
1,611,240	-		DZA65_RS07740	0.88	+0.2
1,611,269	-				-0.5
1,611,269	-				-1.2
1,611,274	-				+1.3
1,611,274	-				+0.3
1,611,274	-				-0.4
1,611,318	+				-2.0
1,611,318	+				+0.9
1,611,318	+				-0.3
1,611,365	+				+0.0
1,611,366	-				-0.6
1,611,366	-				-0.5
1,611,389	-				-0.6
1,611,507	+				+0.3
1,611,626	+		DZA65_RS07745	0.88	+0.4
1,611,687	+				-1.7
1,611,687	+				-0.5
1,611,727	+				-0.3
1,611,727	+				-0.4
1,611,728	-				+0.4
1,611,770	+				+0.5
1,611,770	+				+0.3
1,611,771	-				+0.3
1,611,771	-				+0.1
1,611,771	-				+0.3
1,611,771	-				+1.6
1,611,771	-				-0.2
1,611,994	+				+1.1
1,611,994	+				-0.2
1,611,994	+				+0.3
1,611,994	+				-0.2
1,611,994	+				-1.0
1,611,994	+				-0.1
1,611,994	+				+0.2
1,611,995	-				-0.1
1,611,995	-				+0.6
1,611,995	-				+0.3
1,611,995	-				+2.3
1,611,995	-				+0.3
1,612,021	-				-1.0
1,612,220	+		DZA65_RS07750	0.12	-0.1
1,612,220	+		DZA65_RS07750	0.12	-0.9
1,612,220	+		DZA65_RS07750	0.12	-0.6
1,612,221	-		DZA65_RS07750	0.12	-1.7
1,612,221	-		DZA65_RS07750	0.12	-2.9
1,612,295	+		DZA65_RS07750	0.15	+0.4
1,612,295	+		DZA65_RS07750	0.15	-0.5
1,612,295	+		DZA65_RS07750	0.15	+0.3
1,612,295	+		DZA65_RS07750	0.15	-2.9
1,612,296	-		DZA65_RS07750	0.15	-0.5
1,612,296	-		DZA65_RS07750	0.15	-1.5
1,612,296	-		DZA65_RS07750	0.15	-0.7
1,612,296	-		DZA65_RS07750	0.15	-1.6
1,612,301	+		DZA65_RS07750	0.15	+0.5
1,612,301	+		DZA65_RS07750	0.15	-0.2
1,612,301	+		DZA65_RS07750	0.15	+0.3
1,612,301	+		DZA65_RS07750	0.15	-1.0
1,612,301	+		DZA65_RS07750	0.15	-0.4
1,612,302	-		DZA65_RS07750	0.15	+0.5
1,612,302	-		DZA65_RS07750	0.15	-0.7
1,612,302	-				+0.7
1,612,333	+		DZA65_RS07750	0.16	+3.1
1,612,345	+		DZA65_RS07750	0.16	+1.1
1,612,346	-		DZA65_RS07750	0.16	-0.8
1,612,452	+		DZA65_RS07750	0.20	-0.5
1,612,458	+		DZA65_RS07750	0.20	+1.3
1,612,505	-		DZA65_RS07750	0.21	+0.1
1,612,575	-		DZA65_RS07750	0.24	-1.0
1,612,575	-		DZA65_RS07750	0.24	-0.5
1,612,673	-		DZA65_RS07750	0.27	+1.3
1,612,673	-		DZA65_RS07750	0.27	-1.0
1,612,685	+		DZA65_RS07750	0.27	+0.1
1,612,685	+		DZA65_RS07750	0.27	+0.1
1,612,685	+		DZA65_RS07750	0.27	+1.1
1,612,686	-		DZA65_RS07750	0.27	+0.3
1,612,686	-		DZA65_RS07750	0.27	-2.3
1,612,686	-		DZA65_RS07750	0.27	-0.2
1,612,846	+		DZA65_RS07750	0.32	+0.4
1,612,847	-		DZA65_RS07750	0.32	-0.6
1,612,847	-		DZA65_RS07750	0.32	-2.9
1,612,847	-		DZA65_RS07750	0.32	-1.9
1,612,888	+		DZA65_RS07750	0.34	+0.7
1,612,888	+		DZA65_RS07750	0.34	-1.3
1,612,888	+		DZA65_RS07750	0.34	+0.1
1,612,888	+		DZA65_RS07750	0.34	-0.5
1,612,888	+		DZA65_RS07750	0.34	+0.3
1,612,888	+		DZA65_RS07750	0.34	+0.2
1,612,888	+		DZA65_RS07750	0.34	+0.3
1,612,889	-		DZA65_RS07750	0.34	+1.5
1,612,889	-		DZA65_RS07750	0.34	-2.7
1,613,004	+		DZA65_RS07750	0.37	-1.7
1,613,005	-		DZA65_RS07750	0.37	+0.2
1,613,005	-		DZA65_RS07750	0.37	-1.3
1,613,085	+		DZA65_RS07750	0.40	-0.0
1,613,086	-		DZA65_RS07750	0.40	+2.8
1,613,086	-		DZA65_RS07750	0.40	-1.0
1,613,175	+		DZA65_RS07750	0.43	+1.1
1,613,281	-		DZA65_RS07750	0.46	-0.7
1,613,322	+		DZA65_RS07750	0.48	-0.3
1,613,322	+		DZA65_RS07750	0.48	-2.5
1,613,323	-		DZA65_RS07750	0.48	+1.0
1,613,427	+		DZA65_RS07750	0.51	-0.1
1,613,427	+		DZA65_RS07750	0.51	-0.4
1,613,427	+		DZA65_RS07750	0.51	-0.2
1,613,427	+		DZA65_RS07750	0.51	-0.4
1,613,427	+		DZA65_RS07750	0.51	+0.3
1,613,427	+		DZA65_RS07750	0.51	+0.7
1,613,428	-		DZA65_RS07750	0.51	+0.3
1,613,428	-		DZA65_RS07750	0.51	-3.2
1,613,428	-		DZA65_RS07750	0.51	+0.0
1,613,428	-		DZA65_RS07750	0.51	-1.3
1,613,443	+		DZA65_RS07750	0.51	+0.9
1,613,443	+		DZA65_RS07750	0.51	-0.2
1,613,444	-		DZA65_RS07750	0.51	+0.1
1,613,520	+		DZA65_RS07750	0.54	-0.1
1,613,520	+				-0.3
1,613,520	+		DZA65_RS07750	0.54	+0.7
1,613,521	-		DZA65_RS07750	0.54	-0.9
1,613,521	-		DZA65_RS07750	0.54	+1.2
1,613,521	-				+0.5
1,613,521	-		DZA65_RS07750	0.54	-0.2
1,613,536	+		DZA65_RS07750	0.54	-0.2
1,613,572	+		DZA65_RS07750	0.56	+1.1
1,613,572	+		DZA65_RS07750	0.56	-0.9
1,613,573	-		DZA65_RS07750	0.56	-0.5
1,613,573	-		DZA65_RS07750	0.56	+0.3
1,613,573	-		DZA65_RS07750	0.56	-0.5
1,613,603	+		DZA65_RS07750	0.57	-0.6
1,613,604	-		DZA65_RS07750	0.57	-0.4
1,613,604	-		DZA65_RS07750	0.57	-1.6
1,613,604	-		DZA65_RS07750	0.57	-0.1
1,613,712	+		DZA65_RS07750	0.60	-2.0
1,613,712	+		DZA65_RS07750	0.60	-1.0
1,613,713	-		DZA65_RS07750	0.60	-1.0
1,613,713	-		DZA65_RS07750	0.60	-1.0
1,613,713	-				+1.9
1,613,713	-		DZA65_RS07750	0.60	+1.0
1,613,713	-		DZA65_RS07750	0.60	-2.0
1,613,713	-		DZA65_RS07750	0.60	+0.3
1,613,713	-		DZA65_RS07750	0.60	-1.7
1,613,713	-		DZA65_RS07750	0.60	-1.2
1,613,810	-		DZA65_RS07750	0.63	-1.0
1,613,810	-		DZA65_RS07750	0.63	-1.3
1,613,952	+		DZA65_RS07750	0.68	+0.9
1,613,952	+		DZA65_RS07750	0.68	+0.3
1,613,952	+				+0.8
1,613,974	+		DZA65_RS07750	0.68	-0.9
1,613,975	-		DZA65_RS07750	0.68	-0.2
1,614,165	+				+1.7
1,614,165	+		DZA65_RS07750	0.74	+0.3
1,614,165	+		DZA65_RS07750	0.74	+1.9
1,614,165	+		DZA65_RS07750	0.74	+2.1
1,614,165	+		DZA65_RS07750	0.74	+0.3
1,614,165	+		DZA65_RS07750	0.74	-0.7
1,614,166	-		DZA65_RS07750	0.74	-0.4
1,614,166	-		DZA65_RS07750	0.74	-2.5
1,614,166	-		DZA65_RS07750	0.74	-1.7
1,614,166	-		DZA65_RS07750	0.74	-0.1
1,614,237	+		DZA65_RS07750	0.77	-2.7
1,614,237	+		DZA65_RS07750	0.77	+0.4
1,614,237	+		DZA65_RS07750	0.77	-0.7
1,614,237	+		DZA65_RS07750	0.77	-0.9
1,614,237	+		DZA65_RS07750	0.77	+1.6
1,614,237	+		DZA65_RS07750	0.77	-0.6
1,614,238	-		DZA65_RS07750	0.77	+1.7
1,614,238	-		DZA65_RS07750	0.77	-0.7
1,614,292	+		DZA65_RS07750	0.79	+0.3
1,614,293	-		DZA65_RS07750	0.79	+1.3
1,614,303	+		DZA65_RS07750	0.79	+1.3
1,614,303	+		DZA65_RS07750	0.79	+0.4
1,614,304	-		DZA65_RS07750	0.79	+1.0
1,614,316	-		DZA65_RS07750	0.79	+1.1
1,614,316	-		DZA65_RS07750	0.79	+2.3
1,614,328	+		DZA65_RS07750	0.80	+0.1
1,614,328	+		DZA65_RS07750	0.80	+0.1
1,614,328	+		DZA65_RS07750	0.80	-0.9
1,614,329	-		DZA65_RS07750	0.80	+0.3
1,614,354	+				+1.0
1,614,354	+		DZA65_RS07750	0.80	+0.0
1,614,354	+		DZA65_RS07750	0.80	-0.5
1,614,354	+		DZA65_RS07750	0.80	+0.0
1,614,354	+		DZA65_RS07750	0.80	-0.2
1,614,354	+		DZA65_RS07750	0.80	+0.5
1,614,354	+		DZA65_RS07750	0.80	-2.3
1,614,355	-		DZA65_RS07750	0.81	-0.4
1,614,355	-		DZA65_RS07750	0.81	+0.3
1,614,355	-		DZA65_RS07750	0.81	+0.3
1,614,355	-		DZA65_RS07750	0.81	-0.6
1,614,355	-		DZA65_RS07750	0.81	-1.1
1,614,355	-		DZA65_RS07750	0.81	-0.7
1,614,355	-		DZA65_RS07750	0.81	-0.3
1,614,410	+		DZA65_RS07750	0.82	-0.9
1,614,459	+		DZA65_RS07750	0.84	+0.9
1,614,553	+		DZA65_RS07750	0.87	-0.3
1,614,559	+		DZA65_RS07750	0.87	+0.1
1,614,560	-		DZA65_RS07750	0.87	-1.7
1,614,628	-		DZA65_RS07750	0.89	+0.1
1,614,634	+		DZA65_RS07750	0.89	-0.0
1,614,643	-		DZA65_RS07750	0.90	-0.9
1,614,657	+				-1.5
1,614,756	+				+0.5
1,614,756	+				-0.3
1,614,756	+				-1.5
1,614,757	-				-0.1
1,614,757	-				+1.5
1,614,945	+				-2.0
1,614,945	+				+0.2
1,614,945	+				+1.3
1,614,964	+				-1.4
1,614,964	+				+0.4
1,614,964	+				+0.4
1,614,964	+				+0.1
1,614,965	-				+1.9
1,614,965	-				-0.4
1,614,965	-				+0.7
1,614,965	-				+0.2
1,614,965	-				-0.5
1,614,982	-				+0.6
1,615,001	+				-0.3
1,615,001	+				-0.9
1,615,049	+				+4.1
1,615,112	+				-0.9
1,615,113	-				-0.2
1,615,173	+				-0.2
1,615,173	+				-1.0
1,615,173	+				-0.5
1,615,173	+				+1.0
1,615,174	-				+1.0
1,615,174	-				+1.9
1,615,174	-				+1.3
1,615,174	-				-2.5
1,615,191	-				+0.5
1,615,390	+		DZA65_RS07755	0.21	-0.2
1,615,390	+		DZA65_RS07755	0.21	+0.4
1,615,863	+		DZA65_RS07755	0.65	-1.7
1,615,863	+		DZA65_RS07755	0.65	+0.3
1,615,864	-		DZA65_RS07755	0.65	-0.6
1,615,864	-		DZA65_RS07755	0.65	+0.0
1,615,940	+		DZA65_RS07755	0.72	+1.3
1,615,940	+		DZA65_RS07755	0.72	-0.7
1,615,940	+		DZA65_RS07755	0.72	-0.5
1,615,940	+		DZA65_RS07755	0.72	-0.0
1,615,940	+		DZA65_RS07755	0.72	+1.6
1,615,940	+		DZA65_RS07755	0.72	-1.1
1,615,940	+		DZA65_RS07755	0.72	-0.7
1,615,940	+		DZA65_RS07755	0.72	-0.3
1,615,940	+		DZA65_RS07755	0.72	+0.9
1,615,940	+		DZA65_RS07755	0.72	+0.5
1,615,940	+		DZA65_RS07755	0.72	-1.5
1,615,940	+		DZA65_RS07755	0.72	-0.9
1,615,940	+		DZA65_RS07755	0.72	-0.9
1,615,940	+		DZA65_RS07755	0.72	+0.8
1,615,940	+		DZA65_RS07755	0.72	+0.9
1,615,940	+		DZA65_RS07755	0.72	-0.2
1,615,940	+		DZA65_RS07755	0.72	-1.7
1,615,940	+		DZA65_RS07755	0.72	+1.9
1,615,940	+		DZA65_RS07755	0.72	+0.3
1,615,940	+		DZA65_RS07755	0.72	+0.7
1,615,940	+		DZA65_RS07755	0.72	-0.2
1,615,941	-		DZA65_RS07755	0.72	+1.1
1,615,941	-		DZA65_RS07755	0.72	-1.5
1,615,941	-		DZA65_RS07755	0.72	-1.9
1,615,941	-		DZA65_RS07755	0.72	-0.5
1,615,941	-		DZA65_RS07755	0.72	-0.4
1,615,941	-		DZA65_RS07755	0.72	-0.4
1,615,941	-		DZA65_RS07755	0.72	-0.1
1,615,941	-				-1.3
1,615,941	-		DZA65_RS07755	0.72	+0.4
1,615,941	-		DZA65_RS07755	0.72	+0.6
1,615,941	-		DZA65_RS07755	0.72	+0.4
1,615,941	-		DZA65_RS07755	0.72	-0.7
1,615,941	-		DZA65_RS07755	0.72	-1.4
1,615,941	-		DZA65_RS07755	0.72	-0.7
1,615,941	-		DZA65_RS07755	0.72	-0.2
1,615,941	-		DZA65_RS07755	0.72	+0.3
1,615,941	-		DZA65_RS07755	0.72	-0.5
1,615,944	+		DZA65_RS07755	0.73	-1.0
1,615,944	+		DZA65_RS07755	0.73	+0.3
1,615,944	+		DZA65_RS07755	0.73	+1.9
1,615,944	+		DZA65_RS07755	0.73	+0.3
1,615,944	+		DZA65_RS07755	0.73	-0.7
1,615,944	+		DZA65_RS07755	0.73	-2.3
1,615,945	-		DZA65_RS07755	0.73	-1.6
1,615,945	-		DZA65_RS07755	0.73	-0.0
1,615,945	-		DZA65_RS07755	0.73	-0.4
1,615,945	-		DZA65_RS07755	0.73	+1.3