Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06345

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,319,843	-				+0.2
1,319,843	-				+0.9
1,319,843	-				+2.0
1,319,848	+				-0.2
1,319,848	+				+0.7
1,319,848	+				+0.8
1,319,848	+				-1.1
1,319,849	-				+1.3
1,319,849	-				+0.1
1,319,856	+				-0.6
1,319,856	+				+1.1
1,319,856	+				-0.2
1,319,856	+				+0.2
1,319,857	-				-0.2
1,319,871	+				-0.2
1,319,871	+				+0.0
1,319,871	+				+0.0
1,319,871	+				-0.1
1,319,872	-				+0.3
1,319,875	+				+1.7
1,319,875	+				+0.8
1,319,875	+				+1.1
1,319,876	-				-0.3
1,319,876	-				-1.2
1,319,876	-				-0.6
1,319,876	-				-0.4
1,319,876	-				+0.3
1,319,876	-				+0.4
1,319,876	-				-1.2
1,319,876	-				-0.2
1,319,876	-				+1.5
1,319,876	-				-0.2
1,319,876	-				-0.6
1,319,876	-				-0.4
1,319,876	-				-0.4
1,319,951	+		DZA65_RS06335	0.29	-1.2
1,319,952	-		DZA65_RS06335	0.29	-0.7
1,319,952	-		DZA65_RS06335	0.29	-0.7
1,320,031	+		DZA65_RS06335	0.54	-1.4
1,320,031	+		DZA65_RS06335	0.54	+0.9
1,320,037	+		DZA65_RS06335	0.56	-0.1
1,320,038	-		DZA65_RS06335	0.57	-1.4
1,320,142	+				-1.9
1,320,161	+				-1.2
1,320,172	+				-1.2
1,320,193	+				-0.6
1,320,194	-				-1.2
1,320,307	-				+0.7
1,320,342	+				+0.8
1,320,351	+				+0.4
1,320,357	-				-0.6
1,320,378	-				-0.6
1,320,383	-				-0.1
1,320,383	-				-0.3
1,320,383	-				+1.1
1,320,384	+				-0.9
1,320,384	+				+1.2
1,320,385	-				-0.2
1,320,392	+				-0.3
1,320,392	+				-0.2
1,320,420	-				+0.6
1,320,440	+				+0.1
1,320,441	-				+0.4
1,320,527	+		DZA65_RS06340	0.21	+0.4
1,320,527	+		DZA65_RS06340	0.21	-1.2
1,320,527	+		DZA65_RS06340	0.21	+0.4
1,320,527	+		DZA65_RS06340	0.21	+0.3
1,320,527	+		DZA65_RS06340	0.21	-0.2
1,320,527	+		DZA65_RS06340	0.21	-1.6
1,320,527	+		DZA65_RS06340	0.21	+1.4
1,320,527	+		DZA65_RS06340	0.21	+1.4
1,320,527	+		DZA65_RS06340	0.21	+1.4
1,320,527	+		DZA65_RS06340	0.21	-0.6
1,320,527	+		DZA65_RS06340	0.21	-0.6
1,320,527	+		DZA65_RS06340	0.21	+2.0
1,320,527	+		DZA65_RS06340	0.21	+2.0
1,320,527	+				-1.4
1,320,527	+		DZA65_RS06340	0.21	-0.9
1,320,527	+		DZA65_RS06340	0.21	+0.2
1,320,528	-		DZA65_RS06340	0.21	+0.7
1,320,528	-		DZA65_RS06340	0.21	+1.0
1,320,528	-		DZA65_RS06340	0.21	+2.1
1,320,528	-		DZA65_RS06340	0.21	-1.2
1,320,528	-		DZA65_RS06340	0.21	-0.0
1,320,528	-		DZA65_RS06340	0.21	+0.6
1,320,528	-		DZA65_RS06340	0.21	+0.0
1,320,528	-		DZA65_RS06340	0.21	+0.4
1,320,528	-		DZA65_RS06340	0.21	+0.8
1,320,528	-		DZA65_RS06340	0.21	+0.0
1,320,528	-		DZA65_RS06340	0.21	+0.1
1,320,528	-		DZA65_RS06340	0.21	+0.2
1,320,528	-		DZA65_RS06340	0.21	-0.6
1,320,528	-		DZA65_RS06340	0.21	-0.8
1,320,528	-		DZA65_RS06340	0.21	-0.3
1,320,528	-		DZA65_RS06340	0.21	+0.9
1,320,531	+		DZA65_RS06340	0.22	-1.2
1,320,531	+		DZA65_RS06340	0.22	+0.0
1,320,531	+		DZA65_RS06340	0.22	+0.1
1,320,531	+		DZA65_RS06340	0.22	+0.0
1,320,531	+		DZA65_RS06340	0.22	+0.2
1,320,531	+		DZA65_RS06340	0.22	+0.1
1,320,531	+		DZA65_RS06340	0.22	+0.2
1,320,531	+		DZA65_RS06340	0.22	+0.7
1,320,531	+				-0.6
1,320,531	+		DZA65_RS06340	0.22	+0.7
1,320,532	-		DZA65_RS06340	0.23	+0.9
1,320,532	-		DZA65_RS06340	0.23	+1.9
1,320,532	-		DZA65_RS06340	0.23	+1.4
1,320,532	-		DZA65_RS06340	0.23	+0.8
1,320,532	-		DZA65_RS06340	0.23	+1.0
1,320,537	+		DZA65_RS06340	0.24	+1.6
1,320,537	+		DZA65_RS06340	0.24	-0.2
1,320,538	-		DZA65_RS06340	0.25	+0.0
1,320,549	+		DZA65_RS06340	0.29	-0.8
1,320,550	-		DZA65_RS06340	0.29	-1.4
1,320,550	-		DZA65_RS06340	0.29	-0.4
1,320,550	-		DZA65_RS06340	0.29	+0.2
1,320,577	+		DZA65_RS06340	0.39	+0.2
1,320,577	+		DZA65_RS06340	0.39	-0.2
1,320,577	+		DZA65_RS06340	0.39	+0.2
1,320,577	+		DZA65_RS06340	0.39	-0.0
1,320,577	+		DZA65_RS06340	0.39	-0.1
1,320,578	-		DZA65_RS06340	0.40	-0.3
1,320,582	+		DZA65_RS06340	0.41	+1.6
1,320,696	+		DZA65_RS06340	0.83	-1.2
1,320,723	+				+1.4
1,320,724	-				-0.3
1,320,724	-				-0.6
1,320,741	-				-2.2
1,320,741	-				+0.6
1,320,741	-				+0.7
1,320,741	-				-0.6
1,320,741	-				-0.6
1,320,792	+				+1.0
1,320,792	+				-1.6
1,320,792	+				-1.6
1,320,792	+				+0.4
1,320,793	-				+0.6
1,320,847	+				+1.7
1,320,848	-				+2.8
1,320,848	-				+0.8
1,320,848	-				-0.6
1,320,848	-				-0.1
1,320,859	+				+0.8
1,320,859	+				-1.0
1,320,859	+				-2.0
1,320,860	-				+0.2
1,320,860	-				+0.4
1,320,860	-				+1.4
1,320,874	+				-0.2
1,321,012	-		DZA65_RS06345	0.20	-0.6
1,321,171	-		DZA65_RS06345	0.38	-1.1
1,321,308	+		DZA65_RS06345	0.54	+0.1
1,321,309	-		DZA65_RS06345	0.54	-0.5
1,321,365	-		DZA65_RS06345	0.61	-2.6
1,321,453	+		DZA65_RS06345	0.71	+0.2
1,321,453	+		DZA65_RS06345	0.71	+0.7
1,321,453	+		DZA65_RS06345	0.71	-0.1
1,321,454	-		DZA65_RS06345	0.71	-0.0
1,321,454	-		DZA65_RS06345	0.71	-0.4
1,321,454	-		DZA65_RS06345	0.71	-2.2
1,321,454	-		DZA65_RS06345	0.71	-1.2
1,321,454	-		DZA65_RS06345	0.71	+0.4
1,321,529	+		DZA65_RS06345	0.80	+0.2
1,321,543	+		DZA65_RS06345	0.81	-1.4
1,321,543	+		DZA65_RS06345	0.81	+2.1
1,321,544	-		DZA65_RS06345	0.81	-0.2
1,321,612	+		DZA65_RS06345	0.89	-0.6
1,321,612	+		DZA65_RS06345	0.89	-0.4
1,321,612	+		DZA65_RS06345	0.89	-0.6
1,321,613	-		DZA65_RS06345	0.89	+0.9
1,321,613	-		DZA65_RS06345	0.89	-0.7
1,321,673	+				-0.4
1,321,673	+				-2.2
1,321,673	+				+0.7
1,321,673	+				+1.0
1,321,674	-				+0.1
1,321,698	+				-1.4
1,321,698	+				+1.4
1,321,698	+				-0.1
1,321,699	-				+0.1
1,321,699	-				-0.2
1,321,699	-				-0.8
1,321,699	-				+0.3
1,321,699	-				+0.2
1,321,729	+				-0.2
1,321,729	+				-0.2
1,321,729	+				-0.5
1,321,729	+				-0.3
1,321,730	-				+0.9
1,321,730	-				+1.4
1,321,732	+				+1.4
1,321,732	+				+0.6
1,321,733	-				+0.7
1,321,733	-				+0.7
1,321,733	-				-0.9
1,321,928	-		DZA65_RS06350	0.21	+0.0
1,321,964	-		DZA65_RS06350	0.25	-0.2
1,322,030	+		DZA65_RS06350	0.34	+0.2
1,322,030	+		DZA65_RS06350	0.34	+1.0
1,322,030	+		DZA65_RS06350	0.34	+0.3
1,322,030	+		DZA65_RS06350	0.34	-0.1
1,322,030	+		DZA65_RS06350	0.34	-0.3
1,322,031	-		DZA65_RS06350	0.34	+0.9
1,322,031	-		DZA65_RS06350	0.34	-3.2
1,322,031	-				+0.0
1,322,031	-		DZA65_RS06350	0.34	-1.4
1,322,031	-		DZA65_RS06350	0.34	-0.7
1,322,091	+		DZA65_RS06350	0.42	+1.2
1,322,091	+		DZA65_RS06350	0.42	-1.4
1,322,092	-		DZA65_RS06350	0.42	+0.3
1,322,158	+		DZA65_RS06350	0.50	-0.2
1,322,159	-		DZA65_RS06350	0.51	+0.3
1,322,283	+		DZA65_RS06350	0.67	+1.3
1,322,316	+		DZA65_RS06350	0.71	+0.4
1,322,317	-		DZA65_RS06350	0.71	+0.4
1,322,338	+		DZA65_RS06350	0.74	+0.4
1,322,338	+		DZA65_RS06350	0.74	-0.2
1,322,542	+				-0.3
1,322,543	-				+0.4
1,322,548	+				+0.1
1,322,548	+				+0.4
1,322,548	+				-0.0
1,322,565	+				+2.0
1,322,565	+				-0.3
1,322,565	+				+0.5
1,322,570	-				-1.2
1,322,608	-				+0.2
1,322,617	+				+0.8
1,322,617	+				-1.6
1,322,618	-				-0.1