Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05710

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,173,564	+				-0.4
1,173,654	+		DZA65_RS05700	0.22	+0.5
1,173,657	+		DZA65_RS05700	0.22	+0.3
1,173,658	-		DZA65_RS05700	0.23	-0.7
1,173,658	-		DZA65_RS05700	0.23	+0.2
1,173,750	+		DZA65_RS05700	0.45	-0.7
1,173,750	+		DZA65_RS05700	0.45	-1.9
1,173,750	+		DZA65_RS05700	0.45	-0.5
1,173,751	-		DZA65_RS05700	0.45	+1.3
1,173,767	+		DZA65_RS05700	0.49	+1.0
1,173,767	+		DZA65_RS05700	0.49	+1.0
1,173,767	+		DZA65_RS05700	0.49	-0.6
1,173,767	+		DZA65_RS05700	0.49	-1.5
1,173,767	+		DZA65_RS05700	0.49	+0.5
1,173,767	+		DZA65_RS05700	0.49	-1.5
1,173,767	+		DZA65_RS05700	0.49	+0.3
1,173,767	+		DZA65_RS05700	0.49	+0.1
1,173,767	+		DZA65_RS05700	0.49	-1.1
1,173,767	+		DZA65_RS05700	0.49	-0.4
1,173,767	+		DZA65_RS05700	0.49	+0.5
1,173,767	+		DZA65_RS05700	0.49	-0.2
1,173,767	+		DZA65_RS05700	0.49	-1.5
1,173,767	+		DZA65_RS05700	0.49	-0.3
1,173,767	+		DZA65_RS05700	0.49	-1.3
1,173,767	+		DZA65_RS05700	0.49	+1.1
1,173,768	-		DZA65_RS05700	0.49	+0.2
1,173,768	-		DZA65_RS05700	0.49	+0.3
1,173,768	-		DZA65_RS05700	0.49	+1.0
1,173,768	-		DZA65_RS05700	0.49	-0.5
1,173,768	-		DZA65_RS05700	0.49	-0.8
1,173,768	-		DZA65_RS05700	0.49	+1.2
1,173,768	-		DZA65_RS05700	0.49	-0.9
1,173,768	-		DZA65_RS05700	0.49	-0.1
1,173,768	-		DZA65_RS05700	0.49	+0.7
1,173,768	-				-0.5
1,173,819	+		DZA65_RS05700	0.61	-0.9
1,173,819	+		DZA65_RS05700	0.61	-0.2
1,173,820	-		DZA65_RS05700	0.61	+1.0
1,173,849	+		DZA65_RS05700	0.68	+0.5
1,173,850	-		DZA65_RS05700	0.68	-1.1
1,173,850	-		DZA65_RS05700	0.68	-2.5
1,173,850	-		DZA65_RS05700	0.68	+0.1
1,173,902	+		DZA65_RS05700	0.81	-0.5
1,173,902	+		DZA65_RS05700	0.81	-0.3
1,173,902	+		DZA65_RS05700	0.81	+0.6
1,173,902	+		DZA65_RS05700	0.81	-0.5
1,173,902	+		DZA65_RS05700	0.81	-0.3
1,173,902	+		DZA65_RS05700	0.81	-1.0
1,173,902	+		DZA65_RS05700	0.81	+2.3
1,173,902	+		DZA65_RS05700	0.81	-0.6
1,173,903	-		DZA65_RS05700	0.81	-0.5
1,173,903	-		DZA65_RS05700	0.81	-0.2
1,173,903	-		DZA65_RS05700	0.81	+2.8
1,173,903	-		DZA65_RS05700	0.81	-1.1
1,173,903	-		DZA65_RS05700	0.81	-0.3
1,173,949	+				-0.1
1,173,949	+				-0.4
1,173,968	+				-0.1
1,173,968	+				-1.1
1,173,968	+				-0.3
1,173,969	-				-0.2
1,173,969	-				-0.1
1,173,969	-				-0.0
1,173,969	-				+0.5
1,173,969	-				-0.1
1,173,971	+				-0.5
1,173,971	+				+1.8
1,173,971	+				+0.3
1,173,971	+				-1.5
1,173,971	+				-0.1
1,173,971	+				-2.5
1,173,971	+				-1.1
1,173,972	-				-1.1
1,173,972	-				+0.8
1,173,972	-				+0.2
1,173,972	-				+0.6
1,173,986	+				-0.3
1,173,986	+				+2.1
1,173,987	-				-0.1
1,174,004	+				-0.4
1,174,005	-				+0.8
1,174,005	-				+1.1
1,174,035	+				-0.2
1,174,142	+		DZA65_RS05705	0.28	-1.9
1,174,142	+		DZA65_RS05705	0.28	-1.5
1,174,143	-		DZA65_RS05705	0.29	-0.9
1,174,143	-		DZA65_RS05705	0.29	-0.1
1,174,143	-		DZA65_RS05705	0.29	-1.1
1,174,143	-		DZA65_RS05705	0.29	+0.5
1,174,143	-		DZA65_RS05705	0.29	+0.8
1,174,143	-		DZA65_RS05705	0.29	+0.5
1,174,221	-		DZA65_RS05705	0.43	+0.7
1,174,248	-		DZA65_RS05705	0.48	+0.1
1,174,248	-		DZA65_RS05705	0.48	+0.1
1,174,331	+		DZA65_RS05705	0.63	-1.0
1,174,331	+		DZA65_RS05705	0.63	+0.2
1,174,331	+		DZA65_RS05705	0.63	-0.9
1,174,331	+		DZA65_RS05705	0.63	+0.4
1,174,332	-		DZA65_RS05705	0.63	-0.4
1,174,472	+		DZA65_RS05705	0.88	+0.4
1,174,472	+		DZA65_RS05705	0.88	+1.1
1,174,472	+		DZA65_RS05705	0.88	+1.3
1,174,472	+		DZA65_RS05705	0.88	-0.8
1,174,473	-		DZA65_RS05705	0.88	-0.9
1,174,473	-		DZA65_RS05705	0.88	-2.1
1,174,473	-		DZA65_RS05705	0.88	+0.5
1,174,473	-		DZA65_RS05705	0.88	+0.5
1,174,509	+				+0.8
1,174,509	+				+0.5
1,174,510	-				-0.0
1,174,510	-				-1.2
1,174,520	+				-1.3
1,174,520	+				-0.3
1,174,520	+				-0.0
1,174,520	+				+0.8
1,174,520	+				+1.3
1,174,521	-				-2.2
1,174,521	-				-1.0
1,174,521	-				-2.3
1,174,558	+				-0.9
1,174,639	+				-0.0
1,174,639	+				+0.2
1,174,639	+				+0.5
1,174,639	+				+0.5
1,174,639	+				-1.3
1,174,639	+				-0.9
1,174,639	+				+1.8
1,174,640	-				+0.4
1,174,640	-				+0.5
1,174,640	-				+1.0
1,174,640	-				-0.8
1,174,640	-				+1.0
1,174,640	-				-0.2
1,174,640	-				-1.3
1,174,640	-				-0.1
1,174,642	+				-1.3
1,174,642	+				+0.7
1,174,642	+				+0.3
1,174,642	+				-0.1
1,174,643	-				-1.6
1,174,643	-				-0.6
1,174,643	-				+1.9
1,174,643	-				-0.3
1,174,643	-				-0.9
1,174,643	-				-1.1
1,174,643	-				-0.9
1,174,643	-				+0.1
1,174,670	-				+1.3
1,174,720	+		DZA65_RS05710	0.13	+0.8
1,174,817	+		DZA65_RS05710	0.20	-0.1
1,174,818	-		DZA65_RS05710	0.21	-1.1
1,174,831	-		DZA65_RS05710	0.22	+0.4
1,174,831	-		DZA65_RS05710	0.22	+1.2
1,174,836	+		DZA65_RS05710	0.22	+0.7
1,174,836	+		DZA65_RS05710	0.22	+0.3
1,174,836	+		DZA65_RS05710	0.22	+0.5
1,174,837	-		DZA65_RS05710	0.22	+0.5
1,174,837	-		DZA65_RS05710	0.22	+0.6
1,174,837	-		DZA65_RS05710	0.22	+0.3
1,174,839	-				-0.1
1,174,839	-		DZA65_RS05710	0.22	-1.5
1,174,839	-		DZA65_RS05710	0.22	-0.0
1,174,912	-		DZA65_RS05710	0.28	-0.8
1,174,948	-		DZA65_RS05710	0.31	-0.9
1,174,955	+		DZA65_RS05710	0.32	-0.1
1,174,955	+		DZA65_RS05710	0.32	-0.8
1,174,955	+		DZA65_RS05710	0.32	+1.2
1,175,037	+		DZA65_RS05710	0.38	+0.2
1,175,037	+		DZA65_RS05710	0.38	+1.2
1,175,037	+		DZA65_RS05710	0.38	+0.5
1,175,038	-		DZA65_RS05710	0.38	+0.1
1,175,038	-		DZA65_RS05710	0.38	-1.1
1,175,039	+		DZA65_RS05710	0.38	+0.9
1,175,039	+		DZA65_RS05710	0.38	+0.3
1,175,040	-		DZA65_RS05710	0.39	-0.9
1,175,207	+		DZA65_RS05710	0.52	+0.1
1,175,207	+		DZA65_RS05710	0.52	+1.5
1,175,208	-		DZA65_RS05710	0.52	+0.7
1,175,208	-		DZA65_RS05710	0.52	-0.9
1,175,311	+		DZA65_RS05710	0.60	-1.1
1,175,311	+		DZA65_RS05710	0.60	+0.2
1,175,312	-		DZA65_RS05710	0.61	-0.2
1,175,312	-		DZA65_RS05710	0.61	+1.8
1,175,312	-		DZA65_RS05710	0.61	+0.8
1,175,321	+		DZA65_RS05710	0.61	-0.3
1,175,321	+		DZA65_RS05710	0.61	+0.3
1,175,321	+		DZA65_RS05710	0.61	-1.1
1,175,322	-		DZA65_RS05710	0.61	-0.9
1,175,322	-		DZA65_RS05710	0.61	+1.1
1,175,322	-		DZA65_RS05710	0.61	-1.7
1,175,322	-		DZA65_RS05710	0.61	-0.1
1,175,326	+		DZA65_RS05710	0.62	+0.9
1,175,326	+		DZA65_RS05710	0.62	-0.1
1,175,327	-		DZA65_RS05710	0.62	+0.8
1,175,327	-		DZA65_RS05710	0.62	-0.2
1,175,328	+		DZA65_RS05710	0.62	+2.2
1,175,328	+		DZA65_RS05710	0.62	+1.0
1,175,329	-		DZA65_RS05710	0.62	+0.9
1,175,411	+		DZA65_RS05710	0.69	+0.7
1,175,412	-		DZA65_RS05710	0.69	+0.9
1,175,412	-		DZA65_RS05710	0.69	-0.4
1,175,430	+		DZA65_RS05710	0.70	-1.0
1,175,430	+		DZA65_RS05710	0.70	-2.3
1,175,430	+		DZA65_RS05710	0.70	-0.1
1,175,431	-		DZA65_RS05710	0.70	-0.7
1,175,431	-		DZA65_RS05710	0.70	+1.6
1,175,434	-		DZA65_RS05710	0.70	+0.2
1,175,434	-		DZA65_RS05710	0.70	-1.2
1,175,434	-		DZA65_RS05710	0.70	+0.5
1,175,434	-		DZA65_RS05710	0.70	+1.3
1,175,434	-		DZA65_RS05710	0.70	-0.3
1,175,541	+		DZA65_RS05710	0.79	-0.3
1,175,558	+		DZA65_RS05710	0.80	-0.9
1,175,558	+		DZA65_RS05710	0.80	-0.0
1,175,558	+		DZA65_RS05710	0.80	+1.1
1,175,558	+		DZA65_RS05710	0.80	+0.1
1,175,558	+		DZA65_RS05710	0.80	-0.6
1,175,558	+		DZA65_RS05710	0.80	-2.2
1,175,559	-		DZA65_RS05710	0.81	-0.7
1,175,559	-		DZA65_RS05710	0.81	+1.0
1,175,559	-		DZA65_RS05710	0.81	+0.6
1,175,559	-				+3.5
1,175,570	+		DZA65_RS05710	0.81	+1.1
1,175,573	+		DZA65_RS05710	0.82	-0.4
1,175,686	+				-1.0
1,175,686	+				+0.6
1,175,686	+				+0.7
1,175,697	+				-0.1
1,175,730	+				+2.5
1,175,731	-				-0.8
1,175,731	-				+2.1
1,175,731	-				+0.7
1,175,768	-				-0.3
1,175,821	+				+0.4
1,175,821	+				-0.4
1,175,821	+				-1.9
1,175,821	+				+1.8
1,175,822	-				+0.5
1,175,822	-				-0.6
1,175,826	+				+2.3
1,175,826	+				+2.1
1,175,827	-				+0.8
1,175,898	-				-0.5
1,175,903	+				+0.5
1,175,916	-				-1.5
1,175,919	+				-0.5
1,175,919	+				+0.8
1,175,919	+				-0.9
1,175,951	+				-0.8
1,175,992	+				-0.3
1,175,992	+				-0.1
1,175,993	-				-0.3
1,175,993	-				-1.1
1,176,003	+				-0.5
1,176,003	+				+0.5
1,176,003	+				+0.5
1,176,004	-				-0.4
1,176,102	+				-0.6
1,176,102	+				-0.0
1,176,102	+				-1.9
1,176,102	+				-0.3
1,176,103	-				-0.2
1,176,203	-				+0.1
1,176,216	+				+0.3
1,176,234	-				-0.9
1,176,263	-				+0.0
1,176,263	-				+1.6
1,176,265	-				+0.5
1,176,271	+				+0.6
1,176,272	-				+0.5
1,176,325	+		DZA65_RS05715	0.12	+0.9
1,176,325	+		DZA65_RS05715	0.12	+0.5
1,176,325	+		DZA65_RS05715	0.12	-0.4
1,176,326	-		DZA65_RS05715	0.12	-0.0
1,176,326	-		DZA65_RS05715	0.12	-1.0
1,176,370	+		DZA65_RS05715	0.19	-0.4
1,176,370	+		DZA65_RS05715	0.19	+0.2
1,176,370	+		DZA65_RS05715	0.19	-0.3
1,176,371	-		DZA65_RS05715	0.19	-1.5
1,176,371	-		DZA65_RS05715	0.19	+0.1
1,176,371	-		DZA65_RS05715	0.19	-1.8
1,176,470	-		DZA65_RS05715	0.36	+0.1
1,176,547	+		DZA65_RS05715	0.49	+0.8
1,176,547	+		DZA65_RS05715	0.49	-0.3
1,176,567	-		DZA65_RS05715	0.53	-1.1
1,176,597	-		DZA65_RS05715	0.58	-1.7
1,176,620	+		DZA65_RS05715	0.62	+0.8
1,176,620	+		DZA65_RS05715	0.62	+0.5
1,176,621	-		DZA65_RS05715	0.62	-1.3
1,176,643	+		DZA65_RS05715	0.66	-0.3
1,176,644	-		DZA65_RS05715	0.66	+0.1
1,176,644	-		DZA65_RS05715	0.66	+1.3
1,176,652	+		DZA65_RS05715	0.67	-0.9
1,176,653	-		DZA65_RS05715	0.67	+0.3
1,176,653	-		DZA65_RS05715	0.67	-0.3
1,176,653	-		DZA65_RS05715	0.67	+0.0
1,176,691	+		DZA65_RS05715	0.74	+0.2
1,176,710	+		DZA65_RS05715	0.77	+0.1
1,176,710	+		DZA65_RS05715	0.77	-0.9
1,176,710	+		DZA65_RS05715	0.77	+0.1
1,176,710	+		DZA65_RS05715	0.77	-0.7
1,176,711	-		DZA65_RS05715	0.77	-0.4
1,176,723	+		DZA65_RS05715	0.79	+0.6
1,176,723	+		DZA65_RS05715	0.79	+0.7
1,176,723	+		DZA65_RS05715	0.79	+2.1
1,176,723	+		DZA65_RS05715	0.79	+0.1
1,176,723	+		DZA65_RS05715	0.79	+0.6
1,176,723	+		DZA65_RS05715	0.79	-1.1
1,176,723	+		DZA65_RS05715	0.79	-0.5
1,176,723	+		DZA65_RS05715	0.79	-0.2
1,176,723	+		DZA65_RS05715	0.79	-0.4
1,176,724	-		DZA65_RS05715	0.79	-1.2
1,176,724	-		DZA65_RS05715	0.79	-0.3
1,176,724	-		DZA65_RS05715	0.79	-0.2
1,176,724	-		DZA65_RS05715	0.79	-0.5
1,176,724	-		DZA65_RS05715	0.79	+1.2
1,176,725	+		DZA65_RS05715	0.80	+0.4
1,176,725	+		DZA65_RS05715	0.80	+0.1
1,176,725	+		DZA65_RS05715	0.80	+0.4
1,176,725	+		DZA65_RS05715	0.80	-1.1
1,176,725	+		DZA65_RS05715	0.80	+1.8
1,176,726	-		DZA65_RS05715	0.80	-0.4
1,176,726	-		DZA65_RS05715	0.80	+1.8
1,176,726	-		DZA65_RS05715	0.80	-1.1
1,176,726	-		DZA65_RS05715	0.80	+0.1
1,176,726	-		DZA65_RS05715	0.80	-0.6
1,176,726	-		DZA65_RS05715	0.80	+0.2
1,176,727	+		DZA65_RS05715	0.80	+0.7
1,176,727	+		DZA65_RS05715	0.80	+0.5
1,176,727	+		DZA65_RS05715	0.80	-0.2
1,176,734	-		DZA65_RS05715	0.81	+1.4
1,176,734	-		DZA65_RS05715	0.81	+0.6