Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00705 and DZA65_RS00710 are separated by 20 nucleotides DZA65_RS00710 and DZA65_RS00715 are separated by 4 nucleotides
DZA65_RS00705: DZA65_RS00705 - ABC transporter ATP-binding protein, at 162,717 to 164,615
_RS00705
DZA65_RS00710: DZA65_RS00710 - L-Ala-D/L-Glu epimerase, at 164,636 to 165,601
_RS00710
DZA65_RS00715: DZA65_RS00715 - DUF1611 domain-containing protein, at 165,606 to 166,613
_RS00715
Position (kb) 164
165
166 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 163.685 kb on + strand, within DZA65_RS00705 at 163.685 kb on + strand, within DZA65_RS00705 at 163.685 kb on + strand, within DZA65_RS00705 at 163.686 kb on - strand, within DZA65_RS00705 at 163.737 kb on - strand, within DZA65_RS00705 at 163.798 kb on + strand, within DZA65_RS00705 at 163.798 kb on + strand, within DZA65_RS00705 at 163.799 kb on - strand, within DZA65_RS00705 at 163.799 kb on - strand, within DZA65_RS00705 at 163.862 kb on - strand, within DZA65_RS00705 at 163.862 kb on - strand, within DZA65_RS00705 at 164.072 kb on + strand, within DZA65_RS00705 at 164.659 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.661 kb on + strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.662 kb on - strand at 164.881 kb on - strand, within DZA65_RS00710 at 165.212 kb on + strand, within DZA65_RS00710 at 165.212 kb on + strand, within DZA65_RS00710 at 165.213 kb on - strand, within DZA65_RS00710 at 165.213 kb on - strand, within DZA65_RS00710 at 165.213 kb on - strand, within DZA65_RS00710 at 165.450 kb on + strand, within DZA65_RS00710 at 165.450 kb on + strand, within DZA65_RS00710 at 165.607 kb on + strand at 165.608 kb on - strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.633 kb on + strand at 165.634 kb on - strand at 165.634 kb on - strand at 165.634 kb on - strand at 165.634 kb on - strand at 165.634 kb on - strand at 165.634 kb on - strand at 165.635 kb on + strand at 165.635 kb on + strand at 165.635 kb on + strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.636 kb on - strand at 165.645 kb on - strand at 165.703 kb on + strand at 165.704 kb on - strand at 165.727 kb on + strand, within DZA65_RS00715 at 165.727 kb on + strand, within DZA65_RS00715 at 165.727 kb on + strand, within DZA65_RS00715 at 165.727 kb on + strand, within DZA65_RS00715 at 165.727 kb on + strand, within DZA65_RS00715 at 165.727 kb on + strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.728 kb on - strand, within DZA65_RS00715 at 165.909 kb on - strand at 165.931 kb on + strand, within DZA65_RS00715 at 165.932 kb on - strand, within DZA65_RS00715 at 165.932 kb on - strand, within DZA65_RS00715 at 166.023 kb on - strand, within DZA65_RS00715 at 166.124 kb on + strand, within DZA65_RS00715 at 166.124 kb on + strand, within DZA65_RS00715 at 166.124 kb on + strand, within DZA65_RS00715 at 166.124 kb on + strand, within DZA65_RS00715 at 166.125 kb on - strand, within DZA65_RS00715 at 166.125 kb on - strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.148 kb on + strand, within DZA65_RS00715 at 166.149 kb on - strand, within DZA65_RS00715 at 166.149 kb on - strand, within DZA65_RS00715 at 166.149 kb on - strand, within DZA65_RS00715 at 166.149 kb on - strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.150 kb on + strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.151 kb on - strand, within DZA65_RS00715 at 166.157 kb on + strand, within DZA65_RS00715 at 166.158 kb on - strand, within DZA65_RS00715 at 166.263 kb on + strand, within DZA65_RS00715 at 166.263 kb on + strand, within DZA65_RS00715 at 166.264 kb on - strand, within DZA65_RS00715 at 166.264 kb on - strand, within DZA65_RS00715 at 166.427 kb on + strand, within DZA65_RS00715 at 166.455 kb on - strand, within DZA65_RS00715 at 166.594 kb on + strand at 166.594 kb on + strand at 166.594 kb on + strand at 166.594 kb on + strand at 166.595 kb on - strand at 166.595 kb on - strand at 166.595 kb on - strand at 166.595 kb on - strand at 166.595 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 163,685 + DZA65_RS00705 0.51 -0.0 163,685 + DZA65_RS00705 0.51 +1.1 163,685 + DZA65_RS00705 0.51 +0.2 163,686 - DZA65_RS00705 0.51 -0.1 163,737 - DZA65_RS00705 0.54 +0.4 163,798 + DZA65_RS00705 0.57 +1.0 163,798 + DZA65_RS00705 0.57 -0.2 163,799 - DZA65_RS00705 0.57 +0.3 163,799 - DZA65_RS00705 0.57 +0.8 163,862 - DZA65_RS00705 0.60 -1.2 163,862 - DZA65_RS00705 0.60 -0.5 164,072 + DZA65_RS00705 0.71 -0.8 164,659 + +0.6 164,661 + -1.5 164,661 + -1.6 164,661 + +0.2 164,661 + +0.5 164,661 + +0.8 164,661 + +0.2 164,661 + -0.2 164,661 + -0.4 164,661 + +0.8 164,661 + -1.0 164,661 + -0.5 164,661 + -0.1 164,661 + +0.2 164,661 + +0.8 164,661 + -0.1 164,661 + -0.8 164,661 + -0.1 164,661 + +0.2 164,661 + -0.2 164,661 + +0.2 164,662 - +2.2 164,662 - -0.2 164,662 - -0.8 164,662 - -0.4 164,662 - +0.5 164,662 - -0.2 164,662 - +0.3 164,662 - -0.8 164,662 - +0.5 164,662 - +1.4 164,662 - -0.3 164,662 - +0.6 164,662 - +0.2 164,662 - +0.1 164,662 - +0.7 164,662 - +1.1 164,662 - -0.8 164,662 - +1.4 164,662 - +1.0 164,662 - +1.5 164,662 - +0.2 164,662 - +0.4 164,662 - -1.6 164,881 - DZA65_RS00710 0.25 -0.1 165,212 + DZA65_RS00710 0.60 -0.8 165,212 + DZA65_RS00710 0.60 +0.8 165,213 - DZA65_RS00710 0.60 -0.8 165,213 - DZA65_RS00710 0.60 -0.5 165,213 - DZA65_RS00710 0.60 +0.2 165,450 + DZA65_RS00710 0.84 +0.4 165,450 + DZA65_RS00710 0.84 -1.5 165,607 + +1.4 165,608 - +1.1 165,633 + +1.0 165,633 + -0.8 165,633 + +0.1 165,633 + +0.6 165,633 + +0.4 165,633 + +1.1 165,633 + +0.1 165,633 + -0.3 165,633 + +0.5 165,633 + +0.8 165,633 + +1.2 165,634 - -2.5 165,634 - +0.8 165,634 - -1.0 165,634 - +0.0 165,634 - -0.7 165,634 - -0.9 165,635 + -0.8 165,635 + +0.4 165,635 + +0.7 165,636 - +1.0 165,636 - -0.3 165,636 - +1.0 165,636 - -0.0 165,636 - -0.6 165,636 - -0.4 165,636 - -0.5 165,636 - +1.4 165,636 - -0.2 165,645 - +0.7 165,703 + -0.1 165,704 - +0.8 165,727 + DZA65_RS00715 0.12 -0.3 165,727 + DZA65_RS00715 0.12 +0.2 165,727 + DZA65_RS00715 0.12 -0.9 165,727 + DZA65_RS00715 0.12 +0.2 165,727 + DZA65_RS00715 0.12 -0.5 165,727 + DZA65_RS00715 0.12 +0.1 165,728 - DZA65_RS00715 0.12 +0.5 165,728 - DZA65_RS00715 0.12 -0.8 165,728 - DZA65_RS00715 0.12 +0.6 165,728 - DZA65_RS00715 0.12 -2.9 165,728 - DZA65_RS00715 0.12 -0.6 165,728 - DZA65_RS00715 0.12 -0.4 165,728 - DZA65_RS00715 0.12 +0.4 165,728 - DZA65_RS00715 0.12 +0.6 165,728 - DZA65_RS00715 0.12 -0.7 165,728 - DZA65_RS00715 0.12 -0.0 165,909 - -0.2 165,931 + DZA65_RS00715 0.32 +0.7 165,932 - DZA65_RS00715 0.32 +1.1 165,932 - DZA65_RS00715 0.32 +0.5 166,023 - DZA65_RS00715 0.41 -0.2 166,124 + DZA65_RS00715 0.51 -1.2 166,124 + DZA65_RS00715 0.51 -0.8 166,124 + DZA65_RS00715 0.51 -0.5 166,124 + DZA65_RS00715 0.51 +2.8 166,125 - DZA65_RS00715 0.51 -0.6 166,125 - DZA65_RS00715 0.51 +0.8 166,148 + DZA65_RS00715 0.54 +0.8 166,148 + DZA65_RS00715 0.54 +1.3 166,148 + DZA65_RS00715 0.54 -2.1 166,148 + DZA65_RS00715 0.54 +0.1 166,148 + DZA65_RS00715 0.54 +0.5 166,148 + DZA65_RS00715 0.54 +0.5 166,148 + DZA65_RS00715 0.54 -0.7 166,148 + DZA65_RS00715 0.54 +0.2 166,148 + DZA65_RS00715 0.54 -0.5 166,149 - DZA65_RS00715 0.54 -0.4 166,149 - DZA65_RS00715 0.54 -0.3 166,149 - DZA65_RS00715 0.54 +0.5 166,149 - DZA65_RS00715 0.54 +2.6 166,150 + DZA65_RS00715 0.54 -1.9 166,150 + DZA65_RS00715 0.54 +0.8 166,150 + DZA65_RS00715 0.54 +0.6 166,150 + DZA65_RS00715 0.54 -0.6 166,150 + DZA65_RS00715 0.54 +1.3 166,150 + DZA65_RS00715 0.54 -0.8 166,150 + DZA65_RS00715 0.54 -0.5 166,150 + DZA65_RS00715 0.54 -0.2 166,150 + DZA65_RS00715 0.54 +1.1 166,150 + DZA65_RS00715 0.54 +0.8 166,150 + DZA65_RS00715 0.54 +0.6 166,150 + DZA65_RS00715 0.54 -0.3 166,150 + DZA65_RS00715 0.54 -0.8 166,150 + DZA65_RS00715 0.54 -0.8 166,150 + DZA65_RS00715 0.54 -1.3 166,150 + DZA65_RS00715 0.54 +1.1 166,150 + DZA65_RS00715 0.54 +0.5 166,150 + DZA65_RS00715 0.54 +2.1 166,150 + DZA65_RS00715 0.54 +0.3 166,150 + DZA65_RS00715 0.54 +1.2 166,150 + DZA65_RS00715 0.54 -0.3 166,150 + DZA65_RS00715 0.54 -0.4 166,150 + DZA65_RS00715 0.54 -0.5 166,150 + DZA65_RS00715 0.54 -0.1 166,150 + DZA65_RS00715 0.54 -0.2 166,150 + DZA65_RS00715 0.54 -0.4 166,150 + DZA65_RS00715 0.54 +0.8 166,150 + DZA65_RS00715 0.54 +0.2 166,150 + DZA65_RS00715 0.54 +0.6 166,150 + DZA65_RS00715 0.54 +0.8 166,150 + DZA65_RS00715 0.54 -0.8 166,150 + DZA65_RS00715 0.54 +0.2 166,150 + DZA65_RS00715 0.54 -0.3 166,150 + DZA65_RS00715 0.54 -0.8 166,150 + DZA65_RS00715 0.54 +1.9 166,150 + DZA65_RS00715 0.54 -0.3 166,150 + DZA65_RS00715 0.54 -0.5 166,151 - DZA65_RS00715 0.54 -0.5 166,151 - DZA65_RS00715 0.54 +0.0 166,151 - DZA65_RS00715 0.54 -0.4 166,151 - DZA65_RS00715 0.54 +0.1 166,151 - DZA65_RS00715 0.54 -0.9 166,151 - DZA65_RS00715 0.54 -0.0 166,151 - DZA65_RS00715 0.54 -0.3 166,151 - DZA65_RS00715 0.54 -0.1 166,151 - DZA65_RS00715 0.54 +0.2 166,151 - DZA65_RS00715 0.54 +0.9 166,151 - DZA65_RS00715 0.54 +0.8 166,151 - DZA65_RS00715 0.54 +1.4 166,151 - DZA65_RS00715 0.54 -0.8 166,151 - DZA65_RS00715 0.54 +1.2 166,151 - DZA65_RS00715 0.54 -0.4 166,151 - DZA65_RS00715 0.54 +0.8 166,151 - DZA65_RS00715 0.54 -1.5 166,151 - DZA65_RS00715 0.54 -0.1 166,151 - DZA65_RS00715 0.54 +1.8 166,151 - DZA65_RS00715 0.54 -0.0 166,151 - DZA65_RS00715 0.54 -0.9 166,151 - DZA65_RS00715 0.54 +0.2 166,151 - DZA65_RS00715 0.54 +0.4 166,151 - DZA65_RS00715 0.54 +0.8 166,151 - DZA65_RS00715 0.54 +0.1 166,151 - DZA65_RS00715 0.54 -0.8 166,157 + DZA65_RS00715 0.55 +0.2 166,158 - DZA65_RS00715 0.55 -0.9 166,263 + DZA65_RS00715 0.65 +0.5 166,263 + DZA65_RS00715 0.65 +0.2 166,264 - DZA65_RS00715 0.65 +2.2 166,264 - DZA65_RS00715 0.65 -0.0 166,427 + DZA65_RS00715 0.81 -1.2 166,455 - DZA65_RS00715 0.84 -0.3 166,594 + +0.0 166,594 + -0.2 166,594 + -2.9 166,594 + +0.5 166,595 - -0.6 166,595 - -0.2 166,595 - +0.1 166,595 - -1.4 166,595 - -0.4
Or see this region's nucleotide sequence