Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22500

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,864,264	+		DZA65_RS22490	0.82	-0.9
4,864,264	+		DZA65_RS22490	0.82	+0.6
4,864,264	+		DZA65_RS22490	0.82	-0.5
4,864,265	-		DZA65_RS22490	0.82	-1.6
4,864,265	-		DZA65_RS22490	0.82	+0.1
4,864,316	+		DZA65_RS22490	0.84	-0.3
4,864,316	+		DZA65_RS22490	0.84	+0.1
4,864,316	+		DZA65_RS22490	0.84	+0.5
4,864,316	+		DZA65_RS22490	0.84	-1.1
4,864,316	+		DZA65_RS22490	0.84	-2.2
4,864,316	+		DZA65_RS22490	0.84	-0.7
4,864,316	+		DZA65_RS22490	0.84	+0.9
4,864,316	+		DZA65_RS22490	0.84	+3.1
4,864,316	+		DZA65_RS22490	0.84	-1.9
4,864,316	+		DZA65_RS22490	0.84	+0.6
4,864,316	+		DZA65_RS22490	0.84	-0.1
4,864,316	+		DZA65_RS22490	0.84	+0.2
4,864,316	+		DZA65_RS22490	0.84	+0.3
4,864,316	+		DZA65_RS22490	0.84	-0.3
4,864,316	+		DZA65_RS22490	0.84	-1.4
4,864,316	+		DZA65_RS22490	0.84	+0.7
4,864,317	-		DZA65_RS22490	0.84	-0.4
4,864,317	-		DZA65_RS22490	0.84	+1.9
4,864,317	-		DZA65_RS22490	0.84	+1.1
4,864,317	-		DZA65_RS22490	0.84	+0.2
4,864,317	-		DZA65_RS22490	0.84	-2.1
4,864,317	-		DZA65_RS22490	0.84	+2.9
4,864,317	-		DZA65_RS22490	0.84	+0.2
4,864,317	-		DZA65_RS22490	0.84	-1.5
4,864,317	-		DZA65_RS22490	0.84	-1.1
4,864,317	-		DZA65_RS22490	0.84	-1.1
4,864,317	-		DZA65_RS22490	0.84	-0.1
4,864,317	-		DZA65_RS22490	0.84	-1.6
4,864,317	-		DZA65_RS22490	0.84	-1.4
4,864,317	-		DZA65_RS22490	0.84	-1.6
4,864,317	-		DZA65_RS22490	0.84	-0.3
4,864,472	+				+0.7
4,864,472	+				-0.5
4,864,472	+				+1.0
4,864,472	+				+0.8
4,864,472	+				-0.2
4,864,473	-				-0.6
4,864,473	-				-0.1
4,864,473	-				-1.4
4,864,473	-				-0.1
4,864,473	-				-1.1
4,864,543	+				+1.3
4,864,543	+				-0.2
4,864,543	+				-1.1
4,864,543	+				-1.5
4,864,543	+				+0.1
4,864,543	+				-0.5
4,864,544	-				-2.2
4,864,544	-				-0.8
4,864,544	-				+0.0
4,864,582	+				-0.1
4,864,582	+				-0.2
4,864,582	+				+0.2
4,864,582	+				+1.9
4,864,582	+				+0.9
4,864,583	-				-0.1
4,864,583	-				+0.9
4,864,583	-				-0.4
4,864,583	-				-1.6
4,864,780	-		DZA65_RS22495	0.17	-0.1
4,864,780	-		DZA65_RS22495	0.17	+0.9
4,864,829	+		DZA65_RS22495	0.25	+0.1
4,864,858	+		DZA65_RS22495	0.30	-0.2
4,864,858	+		DZA65_RS22495	0.30	-1.1
4,864,858	+		DZA65_RS22495	0.30	-0.6
4,864,858	+		DZA65_RS22495	0.30	+0.3
4,864,859	-		DZA65_RS22495	0.31	-0.1
4,864,859	-		DZA65_RS22495	0.31	-0.1
4,864,892	+		DZA65_RS22495	0.36	-1.4
4,864,893	-		DZA65_RS22495	0.36	+2.5
4,864,893	-		DZA65_RS22495	0.36	-0.8
4,864,893	-		DZA65_RS22495	0.36	+0.9
4,864,963	+		DZA65_RS22495	0.49	-0.4
4,864,963	+		DZA65_RS22495	0.49	-0.4
4,864,963	+		DZA65_RS22495	0.49	+0.9
4,864,963	+		DZA65_RS22495	0.49	-1.6
4,864,963	+		DZA65_RS22495	0.49	+4.2
4,864,963	+		DZA65_RS22495	0.49	-2.1
4,864,963	+		DZA65_RS22495	0.49	-1.1
4,864,963	+		DZA65_RS22495	0.49	-1.5
4,864,964	-		DZA65_RS22495	0.49	-0.7
4,864,964	-		DZA65_RS22495	0.49	-0.4
4,864,964	-		DZA65_RS22495	0.49	-1.9
4,864,964	-		DZA65_RS22495	0.49	-2.1
4,864,979	+		DZA65_RS22495	0.51	+0.4
4,864,979	+		DZA65_RS22495	0.51	-0.8
4,864,979	+		DZA65_RS22495	0.51	+0.9
4,864,979	+		DZA65_RS22495	0.51	-0.5
4,864,979	+		DZA65_RS22495	0.51	-1.1
4,864,979	+		DZA65_RS22495	0.51	+0.9
4,864,979	+		DZA65_RS22495	0.51	+0.2
4,864,979	+		DZA65_RS22495	0.51	-0.1
4,864,979	+		DZA65_RS22495	0.51	+1.4
4,864,979	+		DZA65_RS22495	0.51	+0.2
4,864,979	+		DZA65_RS22495	0.51	+2.2
4,864,980	-		DZA65_RS22495	0.52	+0.6
4,864,980	-		DZA65_RS22495	0.52	-0.2
4,864,980	-		DZA65_RS22495	0.52	+0.7
4,864,980	-		DZA65_RS22495	0.52	-2.5
4,864,980	-		DZA65_RS22495	0.52	-1.1
4,864,980	-		DZA65_RS22495	0.52	-2.1
4,864,980	-		DZA65_RS22495	0.52	+0.4
4,864,983	+		DZA65_RS22495	0.52	+2.3
4,864,983	+		DZA65_RS22495	0.52	-1.4
4,864,983	+		DZA65_RS22495	0.52	-0.9
4,864,983	+		DZA65_RS22495	0.52	-1.1
4,864,983	+		DZA65_RS22495	0.52	-0.1
4,864,984	-		DZA65_RS22495	0.52	-1.9
4,864,984	-		DZA65_RS22495	0.52	+1.4
4,865,177	+		DZA65_RS22495	0.86	+0.3
4,865,178	+		DZA65_RS22495	0.86	+0.2
4,865,178	+		DZA65_RS22495	0.86	+0.1
4,865,179	-		DZA65_RS22495	0.86	-0.9
4,865,179	-		DZA65_RS22495	0.86	+0.9
4,865,179	-		DZA65_RS22495	0.86	-0.5
4,865,179	-		DZA65_RS22495	0.86	-0.6
4,865,179	-		DZA65_RS22495	0.86	-0.3
4,865,179	-		DZA65_RS22495	0.86	-0.1
4,865,181	+		DZA65_RS22495	0.87	-1.4
4,865,181	+		DZA65_RS22495	0.87	-0.9
4,865,181	+		DZA65_RS22495	0.87	+0.5
4,865,181	+		DZA65_RS22495	0.87	-1.4
4,865,181	+		DZA65_RS22495	0.87	-0.2
4,865,181	+		DZA65_RS22495	0.87	-1.9
4,865,181	+		DZA65_RS22495	0.87	+0.9
4,865,181	+		DZA65_RS22495	0.87	-0.9
4,865,181	+		DZA65_RS22495	0.87	-1.9
4,865,181	+		DZA65_RS22495	0.87	-0.6
4,865,181	+		DZA65_RS22495	0.87	-0.4
4,865,181	+		DZA65_RS22495	0.87	-0.9
4,865,182	-		DZA65_RS22495	0.87	-0.4
4,865,242	+				-2.1
4,865,242	+				-0.9
4,865,243	-				-1.2
4,865,243	-				+0.2
4,865,243	-				+0.2
4,865,243	-				+0.1
4,865,243	-				+1.8
4,865,254	+				-0.4
4,865,255	-				-0.4
4,865,264	+				+1.3
4,865,264	+				-0.1
4,865,264	+				+1.4
4,865,264	+				-1.9
4,865,264	+				-0.7
4,865,264	+				+1.3
4,865,264	+				-1.4
4,865,264	+				+0.4
4,865,264	+				-1.6
4,865,264	+				-0.1
4,865,264	+				-1.8
4,865,264	+				+0.9
4,865,265	-				+0.1
4,865,265	-				+1.9
4,865,265	-				+0.4
4,865,265	-				+0.3
4,865,265	-				-1.3
4,865,265	-				+0.1
4,865,265	-				+0.4
4,865,265	-				+0.2
4,865,265	-				-0.1
4,865,265	-				+0.1
4,865,265	-				+0.7
4,865,265	-				-1.6
4,865,265	-				+0.6
4,865,265	-				+0.2
4,865,265	-				+0.3
4,865,265	-				+0.9
4,865,265	-				+0.2
4,865,266	+				+0.0
4,865,266	+				+0.1
4,865,266	+				-0.2
4,865,267	-				-1.5
4,865,383	+		DZA65_RS22500	0.11	+1.1
4,865,384	-		DZA65_RS22500	0.11	-1.6
4,865,384	-		DZA65_RS22500	0.11	-0.9
4,865,384	-		DZA65_RS22500	0.11	-0.1
4,865,384	-		DZA65_RS22500	0.11	+0.9
4,865,384	-		DZA65_RS22500	0.11	-0.4
4,865,406	+		DZA65_RS22500	0.13	+0.1
4,865,406	+		DZA65_RS22500	0.13	-0.6
4,865,406	+		DZA65_RS22500	0.13	-0.9
4,865,406	+		DZA65_RS22500	0.13	-0.5
4,865,406	+		DZA65_RS22500	0.13	+0.7
4,865,407	-		DZA65_RS22500	0.13	-0.1
4,865,407	-		DZA65_RS22500	0.13	+0.6
4,865,407	-		DZA65_RS22500	0.13	+0.4
4,865,407	-		DZA65_RS22500	0.13	-1.1
4,865,549	-		DZA65_RS22500	0.25	+0.4
4,865,615	+		DZA65_RS22500	0.31	-0.2
4,865,615	+		DZA65_RS22500	0.31	-0.3
4,865,615	+		DZA65_RS22500	0.31	-0.1
4,865,615	+		DZA65_RS22500	0.31	+0.8
4,865,616	-		DZA65_RS22500	0.31	-0.4
4,865,616	-		DZA65_RS22500	0.31	+0.2
4,865,616	-		DZA65_RS22500	0.31	+0.6
4,865,616	-		DZA65_RS22500	0.31	+0.9
4,865,621	+		DZA65_RS22500	0.31	+1.3
4,865,622	-		DZA65_RS22500	0.31	-1.6
4,865,666	+		DZA65_RS22500	0.35	-1.4
4,865,666	+		DZA65_RS22500	0.35	+0.3
4,865,667	-		DZA65_RS22500	0.35	+1.3
4,865,677	-		DZA65_RS22500	0.36	-1.2
4,865,690	+		DZA65_RS22500	0.37	+0.1
4,865,690	+		DZA65_RS22500	0.37	-0.4
4,865,690	+		DZA65_RS22500	0.37	-0.6
4,865,690	+		DZA65_RS22500	0.37	-0.6
4,865,690	+		DZA65_RS22500	0.37	+0.5
4,865,690	+		DZA65_RS22500	0.37	-0.2
4,865,690	+		DZA65_RS22500	0.37	-2.9
4,865,690	+		DZA65_RS22500	0.37	-1.5
4,865,690	+		DZA65_RS22500	0.37	-0.2
4,865,690	+		DZA65_RS22500	0.37	-0.5
4,865,691	-		DZA65_RS22500	0.37	-1.9
4,865,691	-		DZA65_RS22500	0.37	+0.6
4,865,691	-		DZA65_RS22500	0.37	+0.1
4,865,691	-		DZA65_RS22500	0.37	-0.1
4,865,691	-		DZA65_RS22500	0.37	+0.4
4,865,691	-		DZA65_RS22500	0.37	+0.5
4,865,692	+		DZA65_RS22500	0.37	+0.3
4,865,692	+		DZA65_RS22500	0.37	-0.4
4,865,693	-		DZA65_RS22500	0.38	-0.3
4,865,693	-		DZA65_RS22500	0.38	-0.2
4,865,693	-		DZA65_RS22500	0.38	-0.1
4,865,693	-		DZA65_RS22500	0.38	-0.5
4,865,794	+		DZA65_RS22500	0.46	-0.6
4,865,806	+		DZA65_RS22500	0.47	-0.4
4,865,806	+		DZA65_RS22500	0.47	+0.0
4,865,806	+		DZA65_RS22500	0.47	-0.1
4,865,807	-		DZA65_RS22500	0.47	+2.5
4,865,807	-		DZA65_RS22500	0.47	-0.2
4,865,884	+		DZA65_RS22500	0.54	-0.5
4,865,885	-		DZA65_RS22500	0.54	+1.3
4,865,885	-		DZA65_RS22500	0.54	+0.9
4,865,885	-		DZA65_RS22500	0.54	-0.4
4,866,022	+		DZA65_RS22500	0.66	-0.3
4,866,022	+		DZA65_RS22500	0.66	+0.7
4,866,022	+		DZA65_RS22500	0.66	-0.2
4,866,022	+		DZA65_RS22500	0.66	-0.3
4,866,023	-		DZA65_RS22500	0.66	+0.9
4,866,023	-		DZA65_RS22500	0.66	-0.8
4,866,023	-		DZA65_RS22500	0.66	+0.9
4,866,025	+		DZA65_RS22500	0.66	+0.9
4,866,025	+		DZA65_RS22500	0.66	+1.2
4,866,025	+		DZA65_RS22500	0.66	+0.4
4,866,025	+		DZA65_RS22500	0.66	-0.4
4,866,026	-		DZA65_RS22500	0.66	-0.5
4,866,026	-		DZA65_RS22500	0.66	-1.7
4,866,071	+		DZA65_RS22500	0.70	-1.6
4,866,071	+		DZA65_RS22500	0.70	-3.1
4,866,071	+		DZA65_RS22500	0.70	-1.2
4,866,071	+		DZA65_RS22500	0.70	-1.0
4,866,071	+		DZA65_RS22500	0.70	-0.8
4,866,071	+		DZA65_RS22500	0.70	+0.7
4,866,071	+		DZA65_RS22500	0.70	+0.3
4,866,071	+		DZA65_RS22500	0.70	-0.5
4,866,071	+		DZA65_RS22500	0.70	-0.9
4,866,072	-		DZA65_RS22500	0.70	-2.1
4,866,072	-		DZA65_RS22500	0.70	-0.1
4,866,072	-		DZA65_RS22500	0.70	-0.9
4,866,072	-		DZA65_RS22500	0.70	-2.8
4,866,072	-		DZA65_RS22500	0.70	-0.8
4,866,072	-		DZA65_RS22500	0.70	-1.9
4,866,072	-		DZA65_RS22500	0.70	-0.9
4,866,072	-		DZA65_RS22500	0.70	+0.9
4,866,073	+		DZA65_RS22500	0.70	-1.6
4,866,073	+		DZA65_RS22500	0.70	+0.2
4,866,073	+		DZA65_RS22500	0.70	+0.1
4,866,073	+		DZA65_RS22500	0.70	+0.1
4,866,073	+		DZA65_RS22500	0.70	+0.6
4,866,073	+		DZA65_RS22500	0.70	-1.2
4,866,074	-		DZA65_RS22500	0.70	+0.2
4,866,074	-				-1.1
4,866,074	-		DZA65_RS22500	0.70	-0.1
4,866,074	-		DZA65_RS22500	0.70	-0.1
4,866,074	-		DZA65_RS22500	0.70	+0.2
4,866,074	-		DZA65_RS22500	0.70	+0.6
4,866,074	-		DZA65_RS22500	0.70	-1.1
4,866,074	-		DZA65_RS22500	0.70	+0.2
4,866,074	-		DZA65_RS22500	0.70	-1.4
4,866,074	-		DZA65_RS22500	0.70	-0.4
4,866,074	-		DZA65_RS22500	0.70	+0.4
4,866,074	-		DZA65_RS22500	0.70	+0.2
4,866,103	+		DZA65_RS22500	0.73	+1.4
4,866,103	+		DZA65_RS22500	0.73	+2.1
4,866,103	+		DZA65_RS22500	0.73	-0.2
4,866,104	-		DZA65_RS22500	0.73	-0.3
4,866,104	-		DZA65_RS22500	0.73	+0.4
4,866,104	-		DZA65_RS22500	0.73	-0.4
4,866,170	-		DZA65_RS22500	0.79	-0.1
4,866,187	+		DZA65_RS22500	0.80	+1.4
4,866,187	+		DZA65_RS22500	0.80	+0.4
4,866,187	+		DZA65_RS22500	0.80	-0.3
4,866,188	-		DZA65_RS22500	0.80	-0.1
4,866,222	+		DZA65_RS22500	0.83	-0.5
4,866,223	-		DZA65_RS22500	0.83	-0.4
4,866,347	-				+1.6
4,866,379	+				+0.7
4,866,379	+				-0.4
4,866,380	-				+1.7
4,866,418	-				-0.1
4,866,432	-				+0.1
4,866,436	+				-0.4
4,866,436	+				-0.1
4,866,436	+				+0.4
4,866,436	+				+0.6
4,866,436	+				-0.4
4,866,437	-				+0.9
4,866,437	-				-2.1
4,866,437	-				+0.5
4,866,437	-				+0.4
4,866,437	-				+0.0
4,866,449	+				-0.8
4,866,449	+				+1.1
4,866,449	+				+0.0
4,866,449	+				+1.7
4,866,449	+				-1.2
4,866,450	-				+0.6
4,866,450	-				+0.1
4,866,450	-				-0.4
4,866,450	-				-1.1
4,866,604	+		DZA65_RS22505	0.38	-1.1
4,866,676	+		DZA65_RS22505	0.54	+0.1
4,866,676	+		DZA65_RS22505	0.54	+0.4
4,866,676	+		DZA65_RS22505	0.54	+0.2
4,866,677	-		DZA65_RS22505	0.54	+0.6
4,866,715	+		DZA65_RS22505	0.62	-0.6
4,866,716	-		DZA65_RS22505	0.62	-0.1
4,866,816	+		DZA65_RS22505	0.83	-0.9
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