Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22355

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,835,229	+		DZA65_RS22345	0.81	-0.8
4,835,229	+		DZA65_RS22345	0.81	-0.2
4,835,229	+		DZA65_RS22345	0.81	-0.6
4,835,229	+		DZA65_RS22345	0.81	+0.1
4,835,229	+		DZA65_RS22345	0.81	-0.5
4,835,229	+		DZA65_RS22345	0.81	+0.4
4,835,229	+		DZA65_RS22345	0.81	+0.5
4,835,229	+		DZA65_RS22345	0.81	-0.4
4,835,230	-		DZA65_RS22345	0.82	-1.6
4,835,230	-		DZA65_RS22345	0.82	-1.1
4,835,230	-		DZA65_RS22345	0.82	-0.9
4,835,230	-		DZA65_RS22345	0.82	-2.5
4,835,230	-		DZA65_RS22345	0.82	-0.7
4,835,230	-		DZA65_RS22345	0.82	+1.3
4,835,292	+		DZA65_RS22345	0.86	+0.4
4,835,295	+		DZA65_RS22345	0.86	+1.3
4,835,295	+		DZA65_RS22345	0.86	-0.4
4,835,295	+		DZA65_RS22345	0.86	+0.6
4,835,295	+		DZA65_RS22345	0.86	-0.2
4,835,295	+		DZA65_RS22345	0.86	-0.6
4,835,296	-		DZA65_RS22345	0.86	-0.8
4,835,296	-		DZA65_RS22345	0.86	+0.1
4,835,296	-		DZA65_RS22345	0.86	+1.0
4,835,296	-		DZA65_RS22345	0.86	+0.5
4,835,296	-		DZA65_RS22345	0.86	-1.9
4,835,296	-		DZA65_RS22345	0.86	+0.6
4,835,296	-		DZA65_RS22345	0.86	-1.4
4,835,308	-		DZA65_RS22345	0.87	+0.9
4,835,420	+				-0.3
4,835,420	+				+0.3
4,835,420	+				-0.9
4,835,420	+				+1.8
4,835,420	+				+1.4
4,835,420	+				+0.2
4,835,420	+				-0.5
4,835,420	+				+0.6
4,835,421	-				-0.8
4,835,421	-				+1.1
4,835,421	-				+0.4
4,835,421	-				-0.3
4,835,421	-				+0.6
4,835,421	-				+0.9
4,835,421	-				-1.4
4,835,421	-				-0.2
4,835,421	-				+0.2
4,835,421	-				+0.7
4,835,436	+				+0.4
4,835,436	+				-0.1
4,835,436	+				-0.9
4,835,436	+				-0.4
4,835,436	+				-0.1
4,835,436	+				-0.3
4,835,436	+				+1.2
4,835,436	+				+0.3
4,835,436	+				+0.2
4,835,437	-				+0.1
4,835,437	-				-0.2
4,835,437	-				-0.3
4,835,437	-				-2.1
4,835,437	-				+0.4
4,835,526	+				+0.9
4,835,526	+				-0.6
4,835,526	+				-0.1
4,835,526	+				-0.1
4,835,526	+				+0.6
4,835,526	+				+0.1
4,835,526	+				+1.4
4,835,526	+				+1.5
4,835,526	+				-1.0
4,835,526	+				-0.1
4,835,526	+				+0.6
4,835,526	+				-1.6
4,835,526	+				-0.6
4,835,526	+				+0.9
4,835,526	+				-0.8
4,835,527	-				-0.5
4,835,527	-				-0.2
4,835,527	-				-0.2
4,835,527	-				+0.0
4,835,527	-				+0.9
4,835,527	-				+1.1
4,835,527	-				-1.1
4,835,527	-				+1.3
4,835,527	-				+1.4
4,835,527	-				-0.4
4,835,527	-				+0.6
4,835,527	-				-1.0
4,835,530	+				-0.4
4,835,530	+				-0.1
4,835,530	+				-1.1
4,835,530	+				-0.9
4,835,530	+				+1.1
4,835,530	+				+0.3
4,835,530	+				-0.2
4,835,530	+				-1.2
4,835,531	-				-1.2
4,835,531	-				-0.7
4,835,531	-				-1.0
4,835,531	-				-1.9
4,835,531	-				-0.1
4,835,531	-				-1.3
4,835,531	-				-1.6
4,835,531	-				+0.9
4,835,531	-				+0.7
4,835,532	+				+1.1
4,835,532	+				+0.8
4,835,532	+				+1.9
4,835,532	+				+2.0
4,835,533	-				-0.9
4,835,594	+				-1.2
4,835,594	+				-0.6
4,835,594	+				+0.1
4,835,595	-				-0.5
4,835,595	-				-0.3
4,835,601	+				-0.5
4,835,602	-				-0.3
4,835,602	-				-0.5
4,835,602	-				-2.5
4,835,652	+				-0.4
4,835,652	+				-0.6
4,835,652	+				-0.6
4,835,652	+				+0.1
4,835,652	+				+0.3
4,835,652	+				-0.4
4,835,652	+				+2.1
4,835,652	+				-0.1
4,835,652	+				+0.5
4,835,652	+				-0.3
4,835,652	+				-0.1
4,835,652	+				-0.3
4,835,652	+				-0.6
4,835,652	+				-0.6
4,835,652	+				+0.9
4,835,652	+				+0.1
4,835,652	+				-0.3
4,835,653	-				+0.0
4,835,653	-				+0.2
4,835,653	-				+0.4
4,835,653	-				-2.1
4,835,653	-				+0.1
4,835,653	-				+0.5
4,835,653	-				+0.1
4,835,653	-				+0.4
4,835,653	-				+0.7
4,835,653	-				-0.4
4,835,653	-				-1.6
4,835,653	-				-1.2
4,835,653	-				-0.1
4,835,653	-				-0.4
4,835,653	-				-0.9
4,835,653	-				+0.7
4,835,653	-				+0.8
4,835,653	-				+0.9
4,835,653	-				-0.6
4,835,715	+		DZA65_RS22350	0.17	-0.6
4,835,715	+		DZA65_RS22350	0.17	-0.1
4,835,715	+		DZA65_RS22350	0.17	-0.1
4,835,838	+		DZA65_RS22350	0.43	-1.9
4,835,886	+		DZA65_RS22350	0.54	+0.1
4,835,887	-		DZA65_RS22350	0.54	+0.2
4,835,937	+		DZA65_RS22350	0.65	+0.8
4,835,937	+		DZA65_RS22350	0.65	+0.3
4,835,937	+		DZA65_RS22350	0.65	-0.1
4,835,937	+		DZA65_RS22350	0.65	-0.8
4,835,937	+		DZA65_RS22350	0.65	-1.1
4,835,937	+		DZA65_RS22350	0.65	-0.4
4,835,938	-		DZA65_RS22350	0.65	-0.4
4,835,938	-		DZA65_RS22350	0.65	-0.1
4,835,938	-		DZA65_RS22350	0.65	+0.3
4,835,938	-		DZA65_RS22350	0.65	+0.4
4,835,938	-		DZA65_RS22350	0.65	+0.3
4,835,938	-		DZA65_RS22350	0.65	-0.3
4,835,940	+		DZA65_RS22350	0.65	+0.9
4,835,940	+		DZA65_RS22350	0.65	+0.4
4,835,940	+		DZA65_RS22350	0.65	-0.1
4,835,940	+		DZA65_RS22350	0.65	+0.7
4,835,940	+		DZA65_RS22350	0.65	+2.8
4,835,940	+		DZA65_RS22350	0.65	+0.3
4,835,940	+		DZA65_RS22350	0.65	+1.1
4,835,941	-		DZA65_RS22350	0.65	-0.5
4,835,941	-		DZA65_RS22350	0.65	-0.4
4,835,941	-		DZA65_RS22350	0.65	-0.6
4,835,941	-		DZA65_RS22350	0.65	+0.9
4,835,941	-		DZA65_RS22350	0.65	+0.7
4,835,941	-		DZA65_RS22350	0.65	+0.4
4,835,941	-		DZA65_RS22350	0.65	+0.9
4,835,941	-		DZA65_RS22350	0.65	-0.4
4,835,941	-		DZA65_RS22350	0.65	+0.2
4,835,941	-		DZA65_RS22350	0.65	+0.4
4,835,941	-		DZA65_RS22350	0.65	-0.2
4,835,941	-		DZA65_RS22350	0.65	+0.2
4,835,941	-		DZA65_RS22350	0.65	-0.2
4,835,941	-		DZA65_RS22350	0.65	+0.3
4,835,941	-		DZA65_RS22350	0.65	-0.4
4,835,941	-		DZA65_RS22350	0.65	+0.9
4,835,955	+		DZA65_RS22350	0.68	-1.1
4,835,955	+		DZA65_RS22350	0.68	-0.9
4,835,955	+		DZA65_RS22350	0.68	-0.1
4,835,955	+		DZA65_RS22350	0.68	+1.5
4,835,955	+		DZA65_RS22350	0.68	-1.5
4,835,956	-		DZA65_RS22350	0.69	+0.4
4,835,956	-		DZA65_RS22350	0.69	-1.4
4,835,956	-		DZA65_RS22350	0.69	+2.4
4,835,956	-		DZA65_RS22350	0.69	+0.4
4,836,007	+		DZA65_RS22350	0.80	-1.1
4,836,007	+		DZA65_RS22350	0.80	+0.9
4,836,007	+		DZA65_RS22350	0.80	+1.2
4,836,007	+		DZA65_RS22350	0.80	-2.9
4,836,007	+		DZA65_RS22350	0.80	+0.7
4,836,007	+		DZA65_RS22350	0.80	+1.3
4,836,007	+		DZA65_RS22350	0.80	+1.3
4,836,007	+		DZA65_RS22350	0.80	-0.3
4,836,007	+		DZA65_RS22350	0.80	-0.1
4,836,007	+		DZA65_RS22350	0.80	+0.5
4,836,007	+		DZA65_RS22350	0.80	-0.2
4,836,007	+		DZA65_RS22350	0.80	-0.2
4,836,007	+		DZA65_RS22350	0.80	+0.3
4,836,007	+		DZA65_RS22350	0.80	-1.2
4,836,007	+		DZA65_RS22350	0.80	-0.8
4,836,007	+		DZA65_RS22350	0.80	+1.9
4,836,007	+		DZA65_RS22350	0.80	-1.1
4,836,007	+		DZA65_RS22350	0.80	+0.9
4,836,007	+		DZA65_RS22350	0.80	+0.0
4,836,007	+		DZA65_RS22350	0.80	+0.2
4,836,007	+		DZA65_RS22350	0.80	-1.1
4,836,007	+		DZA65_RS22350	0.80	+0.9
4,836,007	+		DZA65_RS22350	0.80	-0.4
4,836,008	-		DZA65_RS22350	0.80	-0.5
4,836,008	-		DZA65_RS22350	0.80	-0.2
4,836,008	-		DZA65_RS22350	0.80	+0.3
4,836,008	-		DZA65_RS22350	0.80	+0.8
4,836,008	-		DZA65_RS22350	0.80	+0.1
4,836,008	-		DZA65_RS22350	0.80	+1.9
4,836,008	-		DZA65_RS22350	0.80	+1.0
4,836,008	-		DZA65_RS22350	0.80	+0.1
4,836,008	-		DZA65_RS22350	0.80	-0.1
4,836,008	-		DZA65_RS22350	0.80	+0.1
4,836,008	-		DZA65_RS22350	0.80	-0.6
4,836,008	-		DZA65_RS22350	0.80	-0.6
4,836,008	-		DZA65_RS22350	0.80	-0.9
4,836,008	-		DZA65_RS22350	0.80	-0.9
4,836,008	-		DZA65_RS22350	0.80	-1.6
4,836,008	-		DZA65_RS22350	0.80	+0.4
4,836,008	-		DZA65_RS22350	0.80	-1.3
4,836,008	-		DZA65_RS22350	0.80	+0.3
4,836,008	-		DZA65_RS22350	0.80	+0.3
4,836,008	-		DZA65_RS22350	0.80	+0.0
4,836,008	-		DZA65_RS22350	0.80	-0.6
4,836,008	-		DZA65_RS22350	0.80	-0.7
4,836,008	-		DZA65_RS22350	0.80	+0.2
4,836,008	-		DZA65_RS22350	0.80	+0.1
4,836,008	-		DZA65_RS22350	0.80	-0.9
4,836,008	-		DZA65_RS22350	0.80	+1.2
4,836,008	-		DZA65_RS22350	0.80	-0.3
4,836,008	-		DZA65_RS22350	0.80	-4.0
4,836,008	-		DZA65_RS22350	0.80	+0.0
4,836,008	-		DZA65_RS22350	0.80	+1.5
4,836,008	-		DZA65_RS22350	0.80	-0.6
4,836,008	-		DZA65_RS22350	0.80	-1.1
4,836,008	-		DZA65_RS22350	0.80	+0.0
4,836,011	+		DZA65_RS22350	0.80	+0.0
4,836,011	+		DZA65_RS22350	0.80	+0.3
4,836,011	+		DZA65_RS22350	0.80	+0.4
4,836,011	+		DZA65_RS22350	0.80	-1.2
4,836,011	+		DZA65_RS22350	0.80	+0.9
4,836,011	+		DZA65_RS22350	0.80	-2.0
4,836,011	+		DZA65_RS22350	0.80	-0.9
4,836,011	+		DZA65_RS22350	0.80	+0.3
4,836,012	-		DZA65_RS22350	0.81	-0.3
4,836,012	-		DZA65_RS22350	0.81	-1.1
4,836,012	-		DZA65_RS22350	0.81	-1.5
4,836,012	-		DZA65_RS22350	0.81	+0.4
4,836,012	-		DZA65_RS22350	0.81	+0.5
4,836,012	-		DZA65_RS22350	0.81	-1.1
4,836,012	-		DZA65_RS22350	0.81	+0.3
4,836,012	-		DZA65_RS22350	0.81	+1.0
4,836,012	-		DZA65_RS22350	0.81	+2.9
4,836,012	-		DZA65_RS22350	0.81	+0.6
4,836,012	-		DZA65_RS22350	0.81	+1.0
4,836,094	+				+0.9
4,836,094	+				+0.8
4,836,094	+				-0.4
4,836,094	+				+1.2
4,836,095	-				-0.5
4,836,095	-				-0.1
4,836,095	-				+0.5
4,836,095	-				-1.1
4,836,095	-				-0.4
4,836,095	-				-1.4
4,836,095	-				-0.5
4,836,095	-				+0.9
4,836,110	+				-1.1
4,836,111	-				+0.5
4,836,111	-				+0.0
4,836,111	-				-2.1
4,836,111	-				+0.0
4,836,111	-				+0.1
4,836,111	-				-0.6
4,836,111	-				+0.9
4,836,111	-				-1.9
4,836,111	-				+0.7
4,836,121	+				-0.4
4,836,124	+				-2.4
4,836,124	+				+0.4
4,836,124	+				+1.0
4,836,124	+				+0.5
4,836,124	+				+1.4
4,836,134	+				-0.3
4,836,134	+				+1.5
4,836,134	+				-0.9
4,836,134	+				+0.9
4,836,134	+				+0.2
4,836,134	+				-0.1
4,836,134	+				+0.4
4,836,134	+				+0.2
4,836,135	-				+0.2
4,836,135	-				-2.4
4,836,135	-				+0.7
4,836,135	-				-0.1
4,836,135	-				+1.8
4,836,135	-				+0.2
4,836,135	-				+1.3
4,836,157	+				+0.6
4,836,157	+				+0.9
4,836,157	+				-0.1
4,836,157	+				+0.9
4,836,157	+				-0.2
4,836,157	+				-0.2
4,836,157	+				+0.5
4,836,157	+				+0.6
4,836,157	+				+0.4
4,836,157	+				+1.2
4,836,157	+				-0.9
4,836,157	+				-1.6
4,836,157	+				+1.1
4,836,157	+				-0.1
4,836,157	+				-0.2
4,836,157	+				-0.6
4,836,157	+				+0.0
4,836,157	+				+0.5
4,836,158	-				+0.4
4,836,158	-				-3.1
4,836,158	-				-0.5
4,836,158	-				+0.6
4,836,158	-				+1.5
4,836,158	-				-1.4
4,836,158	-				+1.5
4,836,158	-				-0.5
4,836,158	-				-0.1
4,836,158	-				-0.1
4,836,158	-				-0.8
4,836,158	-				+0.1
4,836,158	-				-0.5
4,836,158	-				-1.1
4,836,158	-				+0.8
4,836,158	-				-1.0
4,836,158	-				+0.4
4,836,158	-				-2.4
4,836,158	-				-0.4
4,836,158	-				+1.2
4,836,158	-				-0.4
4,836,158	-				+0.5
4,836,158	-				-1.1
4,836,158	-				-0.3
4,836,158	-				+0.8
4,836,158	-				-0.6
4,836,158	-				+0.1
4,836,158	-				-1.6
4,836,158	-				-0.8
4,836,158	-				+0.1
4,836,158	-				+0.4
4,836,158	-				+1.8
4,836,158	-				-0.6
4,836,158	-				-1.1
4,836,192	+				+0.1
4,836,193	-				-0.6
4,836,204	+				+0.7
4,836,204	+				+0.1
4,836,205	-				+0.2
4,836,205	-				+1.1
4,836,205	-				-1.4
4,836,205	-				-0.4
4,836,241	+		DZA65_RS22355	0.11	+1.0
4,836,241	+		DZA65_RS22355	0.11	+0.1
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