Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22195

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,798,436	+		DZA65_RS22185	0.77	-0.8
4,798,437	-		DZA65_RS22185	0.78	-1.5
4,798,437	-		DZA65_RS22185	0.78	-0.5
4,798,437	-		DZA65_RS22185	0.78	-1.1
4,798,437	-		DZA65_RS22185	0.78	-1.0
4,798,523	+				-0.2
4,798,523	+				+0.2
4,798,523	+				-1.4
4,798,524	-				-0.8
4,798,534	+				+0.9
4,798,535	-				-0.1
4,798,543	+				-2.2
4,798,543	+				-0.5
4,798,543	+				-0.1
4,798,544	-				+0.2
4,798,544	-				-0.1
4,798,544	-				+0.5
4,798,556	+				+0.6
4,798,556	+				+0.8
4,798,557	-				+0.2
4,798,557	-				-0.4
4,798,626	+		DZA65_RS22190	0.14	-1.4
4,798,626	+		DZA65_RS22190	0.14	+0.6
4,798,626	+		DZA65_RS22190	0.14	+0.7
4,798,626	+		DZA65_RS22190	0.14	-0.3
4,798,626	+		DZA65_RS22190	0.14	-0.2
4,798,626	+		DZA65_RS22190	0.14	-0.1
4,798,627	-		DZA65_RS22190	0.14	+0.2
4,798,627	-		DZA65_RS22190	0.14	+1.1
4,798,627	-		DZA65_RS22190	0.14	+0.1
4,798,627	-		DZA65_RS22190	0.14	-0.2
4,798,627	-		DZA65_RS22190	0.14	-0.9
4,798,627	-		DZA65_RS22190	0.14	-1.5
4,798,627	-		DZA65_RS22190	0.14	-0.7
4,798,627	-		DZA65_RS22190	0.14	-1.4
4,798,655	+		DZA65_RS22190	0.18	+0.5
4,798,655	+		DZA65_RS22190	0.18	-1.4
4,798,759	+		DZA65_RS22190	0.35	+0.3
4,798,759	+		DZA65_RS22190	0.35	+0.6
4,798,760	-		DZA65_RS22190	0.36	+0.4
4,798,792	+		DZA65_RS22190	0.41	+0.5
4,798,829	+		DZA65_RS22190	0.47	-0.7
4,798,829	+		DZA65_RS22190	0.47	+0.0
4,798,830	-		DZA65_RS22190	0.47	+0.1
4,798,839	+		DZA65_RS22190	0.49	-1.9
4,798,839	+		DZA65_RS22190	0.49	-0.5
4,798,839	+		DZA65_RS22190	0.49	-0.6
4,798,839	+		DZA65_RS22190	0.49	+0.5
4,798,839	+		DZA65_RS22190	0.49	+0.5
4,798,840	-		DZA65_RS22190	0.49	+0.9
4,798,840	-		DZA65_RS22190	0.49	+0.1
4,798,840	-		DZA65_RS22190	0.49	+0.2
4,798,840	-		DZA65_RS22190	0.49	+0.4
4,798,840	-		DZA65_RS22190	0.49	-2.5
4,798,840	-		DZA65_RS22190	0.49	+1.2
4,798,840	-		DZA65_RS22190	0.49	-0.3
4,798,840	-		DZA65_RS22190	0.49	-1.3
4,798,842	+		DZA65_RS22190	0.49	+0.2
4,798,843	-		DZA65_RS22190	0.49	-1.1
4,798,843	-		DZA65_RS22190	0.49	-0.4
4,798,899	+		DZA65_RS22190	0.58	-1.8
4,798,899	+		DZA65_RS22190	0.58	-1.1
4,798,900	-		DZA65_RS22190	0.58	-0.5
4,798,900	-		DZA65_RS22190	0.58	+0.6
4,799,129	+				-0.6
4,799,130	-				+0.6
4,799,133	+				-0.9
4,799,133	+				-0.2
4,799,144	+				-0.1
4,799,144	+				-0.6
4,799,145	-				+0.2
4,799,146	+				-1.9
4,799,146	+				-0.4
4,799,146	+				-0.2
4,799,146	+				-0.3
4,799,146	+				-0.5
4,799,147	-				-0.6
4,799,147	-				-1.5
4,799,147	-				+0.5
4,799,147	-				+0.2
4,799,147	-				-0.4
4,799,147	-				-1.2
4,799,147	-				+0.6
4,799,147	-				-3.1
4,799,147	-				+0.4
4,799,189	-				+0.6
4,799,189	-				-0.2
4,799,221	-				-0.8
4,799,232	+				+1.1
4,799,232	+				-0.5
4,799,232	+				+1.2
4,799,232	+				-0.8
4,799,232	+				-0.5
4,799,233	-				+0.9
4,799,233	-				+0.3
4,799,233	-				-0.9
4,799,235	+				-0.3
4,799,235	+				+1.1
4,799,235	+				-1.1
4,799,235	+				+0.4
4,799,236	-				+0.9
4,799,236	-				-0.5
4,799,236	-				+1.4
4,799,236	-				-0.3
4,799,236	-				-1.1
4,799,293	+				-1.9
4,799,338	+				-1.9
4,799,343	+				+0.5
4,799,344	-				+0.3
4,799,357	+				-2.1
4,799,378	-				+1.5
4,799,378	-				-1.4
4,799,378	-				-0.1
4,799,460	+				-1.7
4,799,644	+		DZA65_RS22195	0.15	-1.6
4,799,645	-		DZA65_RS22195	0.15	-0.5
4,799,645	-		DZA65_RS22195	0.15	+1.1
4,799,705	-		DZA65_RS22195	0.18	-1.9
4,799,786	-				+0.9
4,799,803	+		DZA65_RS22195	0.23	-3.8
4,799,804	-		DZA65_RS22195	0.23	-2.8
4,799,878	+		DZA65_RS22195	0.28	-0.8
4,799,878	+		DZA65_RS22195	0.28	+0.4
4,799,878	+		DZA65_RS22195	0.28	-0.1
4,799,889	+		DZA65_RS22195	0.28	-1.0
4,799,890	-		DZA65_RS22195	0.28	+0.9
4,799,934	-		DZA65_RS22195	0.31	-1.1
4,800,226	+		DZA65_RS22195	0.47	-0.1
4,800,226	+		DZA65_RS22195	0.47	-1.6
4,800,227	-		DZA65_RS22195	0.47	-2.2
4,800,271	+		DZA65_RS22195	0.49	-0.6
4,800,272	-		DZA65_RS22195	0.49	-1.1
4,800,272	-		DZA65_RS22195	0.49	-1.9
4,800,272	-		DZA65_RS22195	0.49	-1.3
4,800,272	-		DZA65_RS22195	0.49	-2.1
4,800,338	+		DZA65_RS22195	0.53	-1.1
4,800,339	-		DZA65_RS22195	0.53	-1.1
4,800,339	-		DZA65_RS22195	0.53	-1.4
4,800,413	+		DZA65_RS22195	0.57	-1.4
4,800,439	-		DZA65_RS22195	0.58	-0.8
4,800,550	+		DZA65_RS22195	0.64	-0.7
4,800,550	+		DZA65_RS22195	0.64	+0.9
4,800,550	+		DZA65_RS22195	0.64	-3.0
4,800,550	+		DZA65_RS22195	0.64	-1.6
4,800,550	+		DZA65_RS22195	0.64	-0.6
4,800,550	+		DZA65_RS22195	0.64	+0.4
4,800,550	+		DZA65_RS22195	0.64	-0.9
4,800,550	+		DZA65_RS22195	0.64	+0.0
4,800,550	+		DZA65_RS22195	0.64	+0.4
4,800,550	+		DZA65_RS22195	0.64	-2.1
4,800,551	-		DZA65_RS22195	0.64	-0.9
4,800,551	-		DZA65_RS22195	0.64	-0.8
4,800,559	+		DZA65_RS22195	0.65	+2.2
4,800,559	+				+0.9
4,800,560	-		DZA65_RS22195	0.65	-1.3
4,800,560	-		DZA65_RS22195	0.65	-0.8
4,800,560	-		DZA65_RS22195	0.65	-0.6
4,800,666	-		DZA65_RS22195	0.71	-1.4
4,800,671	+		DZA65_RS22195	0.71	-0.1
4,800,671	+		DZA65_RS22195	0.71	-0.4
4,800,672	-		DZA65_RS22195	0.71	+1.3
4,800,816	-		DZA65_RS22195	0.79	+0.4
4,800,816	-		DZA65_RS22195	0.79	-2.5
4,800,819	-		DZA65_RS22195	0.79	-0.6
4,800,844	+		DZA65_RS22195	0.80	-1.2
4,800,916	-		DZA65_RS22195	0.84	+2.8
4,800,916	-		DZA65_RS22195	0.84	-0.1
4,800,916	-		DZA65_RS22195	0.84	+0.4
4,800,997	+		DZA65_RS22195	0.89	+0.3
4,801,037	+				-0.4
4,801,095	-				-0.1
4,801,095	-				-1.3
4,801,170	-				-1.1
4,801,219	+				-0.4
4,801,220	-				+0.6
4,801,220	-				+2.7
4,801,225	+				-1.1
4,801,226	-				-0.6
4,801,234	-				+0.3
4,801,234	-				+0.8
4,801,238	+				-0.5
4,801,238	+				-0.5
4,801,239	-				-0.4
4,801,239	-				-0.4
4,801,239	-				-0.1
4,801,239	-				-0.5
4,801,239	-				+0.9
4,801,244	+				-1.6
4,801,244	+				-2.5
4,801,244	+				+1.7
4,801,244	+				+1.5
4,801,244	+				-0.4
4,801,244	+				-1.6
4,801,245	-				+1.2
4,801,245	-				-1.2
4,801,245	-				-0.1
4,801,245	-				-1.4
4,801,245	-				+0.5
4,801,245	-				-0.8
4,801,245	-				+0.9
4,801,245	-				+0.9
4,801,245	-				+0.7
4,801,245	-				-0.4
4,801,245	-				+0.9
4,801,331	-				-0.1
4,801,349	+				-0.1
4,801,349	+				-0.7
4,801,349	+				+0.6
4,801,349	+				-0.2
4,801,349	+				-0.5
4,801,349	+				-0.0
4,801,349	+				-0.4
4,801,350	-				-0.1
4,801,350	-				+0.9
4,801,350	-				+1.4
4,801,352	+				+0.7
4,801,352	+				+1.2
4,801,353	-				+0.1
4,801,353	-				+0.5
4,801,363	+				-0.1
4,801,363	+				-1.4
4,801,363	+				+0.0
4,801,364	-				+0.6
4,801,364	-				+0.4
4,801,396	+				-0.6
4,801,457	+				+0.0
4,801,457	+				-0.1
4,801,457	+				+0.3
4,801,457	+				+1.4
4,801,457	+				-0.4
4,801,458	-				+0.1
4,801,458	-				-0.5
4,801,470	-				-2.9
4,801,470	-				-1.0
4,801,491	+				-0.1
4,801,491	+				-0.1
4,801,492	-				-0.6
4,801,494	-				+0.9
4,801,494	-				-3.4
4,801,502	+				-0.1
4,801,503	-				+1.3