Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22175

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,794,305	+		DZA65_RS22165	0.49	-0.9
4,794,306	-		DZA65_RS22165	0.49	-0.8
4,794,318	+		DZA65_RS22165	0.50	-0.1
4,794,402	+		DZA65_RS22165	0.56	-1.2
4,794,402	+		DZA65_RS22165	0.56	+2.9
4,794,402	+		DZA65_RS22165	0.56	-0.6
4,794,402	+		DZA65_RS22165	0.56	-0.2
4,794,402	+		DZA65_RS22165	0.56	-1.1
4,794,403	-		DZA65_RS22165	0.56	-1.3
4,794,403	-		DZA65_RS22165	0.56	-1.0
4,794,403	-		DZA65_RS22165	0.56	+0.6
4,794,403	-		DZA65_RS22165	0.56	-0.9
4,794,403	-		DZA65_RS22165	0.56	-0.6
4,794,403	-		DZA65_RS22165	0.56	+1.3
4,794,405	+		DZA65_RS22165	0.56	+0.7
4,794,406	-		DZA65_RS22165	0.56	+0.3
4,794,534	+		DZA65_RS22165	0.65	+0.5
4,794,534	+		DZA65_RS22165	0.65	+0.1
4,794,534	+		DZA65_RS22165	0.65	-0.1
4,794,534	+		DZA65_RS22165	0.65	+2.4
4,794,535	-		DZA65_RS22165	0.66	+1.0
4,794,535	-		DZA65_RS22165	0.66	-0.8
4,794,535	-		DZA65_RS22165	0.66	-1.3
4,794,535	-		DZA65_RS22165	0.66	-0.3
4,794,602	+		DZA65_RS22165	0.70	+0.4
4,794,602	+		DZA65_RS22165	0.70	-0.4
4,794,602	+		DZA65_RS22165	0.70	-0.1
4,794,602	+		DZA65_RS22165	0.70	+0.9
4,794,602	+		DZA65_RS22165	0.70	+0.3
4,794,602	+		DZA65_RS22165	0.70	-0.4
4,794,669	+		DZA65_RS22165	0.75	-1.6
4,794,703	+		DZA65_RS22165	0.78	-1.1
4,794,704	-		DZA65_RS22165	0.78	+1.1
4,794,712	+		DZA65_RS22165	0.78	+1.1
4,794,712	+		DZA65_RS22165	0.78	+0.7
4,794,712	+		DZA65_RS22165	0.78	-0.4
4,794,712	+		DZA65_RS22165	0.78	+0.2
4,794,713	-		DZA65_RS22165	0.78	+0.3
4,794,713	-		DZA65_RS22165	0.78	+0.8
4,794,736	+		DZA65_RS22165	0.80	-1.4
4,794,736	+		DZA65_RS22165	0.80	-0.7
4,794,736	+		DZA65_RS22165	0.80	-1.9
4,794,737	-		DZA65_RS22165	0.80	+0.8
4,794,737	-		DZA65_RS22165	0.80	+0.9
4,794,737	-		DZA65_RS22165	0.80	-0.4
4,794,812	+		DZA65_RS22165	0.85	+1.4
4,794,812	+		DZA65_RS22165	0.85	+2.8
4,794,812	+		DZA65_RS22165	0.85	+0.1
4,794,812	+		DZA65_RS22165	0.85	-0.4
4,794,813	-		DZA65_RS22165	0.86	-2.4
4,794,813	-		DZA65_RS22165	0.86	+1.2
4,794,813	-		DZA65_RS22165	0.86	-1.2
4,794,813	-		DZA65_RS22165	0.86	-0.3
4,794,813	-		DZA65_RS22165	0.86	+0.5
4,794,813	-		DZA65_RS22165	0.86	+0.6
4,794,813	-		DZA65_RS22165	0.86	+0.6
4,794,965	+				-0.3
4,795,012	-				+0.5
4,795,040	+				+0.4
4,795,040	+				-0.3
4,795,040	+				-0.1
4,795,040	+				+0.8
4,795,040	+				+0.8
4,795,040	+				-0.6
4,795,040	+				+1.7
4,795,041	-				-0.5
4,795,041	-				-0.5
4,795,041	-				-1.1
4,795,041	-				+0.6
4,795,041	-				-0.1
4,795,047	+				-1.4
4,795,047	+				-0.1
4,795,047	+				+0.5
4,795,047	+				-0.6
4,795,047	+				+0.9
4,795,048	-				-1.1
4,795,048	-				-0.2
4,795,050	+				+0.1
4,795,051	-				-0.5
4,795,051	-				-0.1
4,795,051	-				+0.3
4,795,068	+				-1.2
4,795,068	+				-0.3
4,795,068	+				-0.4
4,795,068	+				+1.4
4,795,069	-				+1.1
4,795,069	-				+0.9
4,795,069	-				-0.9
4,795,069	-				+1.3
4,795,069	-				-0.1
4,795,077	+				+0.2
4,795,077	+				-1.2
4,795,078	-				+0.1
4,795,078	-				+1.1
4,795,125	-				-1.6
4,795,125	-				-2.4
4,795,125	-				+0.4
4,795,125	-				+2.2
4,795,125	-				+1.0
4,795,132	+				+0.1
4,795,132	+				-0.6
4,795,132	+				+0.1
4,795,133	-				-0.1
4,795,133	-				+0.4
4,795,133	-				+0.4
4,795,170	+				-0.4
4,795,170	+				+0.9
4,795,180	+				-0.4
4,795,180	+				-0.6
4,795,181	-				-1.2
4,795,181	-				+0.1
4,795,190	-				-0.8
4,795,191	+				-1.5
4,795,191	+				+1.6
4,795,191	+				-0.8
4,795,191	+				-0.6
4,795,191	+				+0.3
4,795,191	+				-0.3
4,795,192	-				-0.3
4,795,192	-				-1.9
4,795,192	-				-1.0
4,795,192	-				+0.3
4,795,204	+				+1.1
4,795,204	+				-2.5
4,795,204	+				+1.4
4,795,204	+				-0.1
4,795,205	-				+1.3
4,795,205	-				-1.1
4,795,205	-				-0.6
4,795,205	-				+1.1
4,795,208	+				-0.2
4,795,208	+				+0.6
4,795,208	+				-1.6
4,795,208	+				-0.2
4,795,208	+				+0.5
4,795,208	+				-0.1
4,795,209	-				+1.5
4,795,209	-				+0.8
4,795,209	-				-0.1
4,795,209	-				-1.1
4,795,220	+				-0.1
4,795,220	+				+1.8
4,795,220	+				+0.3
4,795,220	+				-1.4
4,795,220	+				-0.6
4,795,221	-				-2.1
4,795,221	-				+0.0
4,795,221	-				+0.9
4,795,221	-				-1.3
4,795,221	-				-1.4
4,795,225	+				+1.9
4,795,225	+				-1.5
4,795,225	+				+0.5
4,795,225	+				-0.2
4,795,226	-				-3.1
4,795,245	+				-0.2
4,795,245	+				-0.8
4,795,246	-				-0.5
4,795,256	+				+0.6
4,795,256	+				-0.2
4,795,289	+				-0.5
4,795,289	+				-1.3
4,795,289	+				-0.2
4,795,289	+				-1.1
4,795,290	-				-0.4
4,795,290	-				+0.4
4,795,290	-				-1.6
4,795,290	-				-0.4
4,795,290	-				+0.2
4,795,290	-				-0.1
4,795,333	-				-1.2
4,795,361	+				+0.4
4,795,361	+				-0.3
4,795,361	+				-1.9
4,795,361	+				-0.5
4,795,361	+				-0.1
4,795,361	+				+0.9
4,795,362	-				+1.8
4,795,362	-				-0.6
4,795,362	-				-1.6
4,795,362	-				-0.1
4,795,362	-				+0.5
4,795,362	-				+0.6
4,795,362	-				+1.4
4,795,365	+				-0.7
4,795,366	-				-0.2
4,795,366	-				-0.9
4,795,366	-				+0.0
4,795,366	-				+0.5
4,795,366	-				-0.3
4,795,366	-				+0.4
4,795,396	+				-1.5
4,795,396	+				-0.1
4,795,396	+				-1.2
4,795,396	+				+0.6
4,795,397	-				+0.1
4,795,397	-				+0.3
4,795,397	-				-0.5
4,795,397	-				-0.2
4,795,397	-				-0.3
4,795,397	-				+0.1
4,795,397	-				-2.9
4,795,397	-				-0.1
4,795,420	+				+0.6
4,795,421	-				+0.4
4,795,421	-				-1.1
4,795,639	+		DZA65_RS22175	0.20	-0.4
4,795,639	+		DZA65_RS22175	0.20	+1.3
4,795,639	+		DZA65_RS22175	0.20	-1.5
4,795,639	+		DZA65_RS22175	0.20	-0.7
4,795,639	+		DZA65_RS22175	0.20	-0.9
4,795,639	+		DZA65_RS22175	0.20	-0.1
4,795,639	+		DZA65_RS22175	0.20	+0.3
4,795,640	-		DZA65_RS22175	0.20	+0.5
4,795,640	-		DZA65_RS22175	0.20	-0.4
4,795,640	-		DZA65_RS22175	0.20	-0.8
4,795,640	-		DZA65_RS22175	0.20	-0.2
4,795,728	+		DZA65_RS22175	0.25	-0.4
4,795,728	+		DZA65_RS22175	0.25	+1.2
4,795,728	+		DZA65_RS22175	0.25	+0.8
4,795,729	-		DZA65_RS22175	0.25	-0.2
4,795,729	-		DZA65_RS22175	0.25	+0.2
4,795,738	+		DZA65_RS22175	0.25	-0.6
4,795,738	+		DZA65_RS22175	0.25	-0.1
4,795,741	+		DZA65_RS22175	0.26	-0.4
4,795,741	+		DZA65_RS22175	0.26	+0.7
4,795,742	-		DZA65_RS22175	0.26	-0.2
4,795,742	-		DZA65_RS22175	0.26	+0.4
4,795,742	-		DZA65_RS22175	0.26	+0.8
4,795,778	-		DZA65_RS22175	0.28	-0.4
4,795,842	+		DZA65_RS22175	0.31	+0.8
4,795,842	+		DZA65_RS22175	0.31	+0.6
4,795,842	+		DZA65_RS22175	0.31	-1.2
4,795,842	+		DZA65_RS22175	0.31	+0.5
4,795,842	+		DZA65_RS22175	0.31	+0.3
4,795,843	-		DZA65_RS22175	0.31	-1.9
4,795,843	-		DZA65_RS22175	0.31	-0.5
4,795,843	-		DZA65_RS22175	0.31	-1.3
4,795,843	-		DZA65_RS22175	0.31	+0.5
4,795,843	-		DZA65_RS22175	0.31	-0.3
4,795,843	-		DZA65_RS22175	0.31	-1.6
4,795,843	-		DZA65_RS22175	0.31	-1.3
4,795,845	+		DZA65_RS22175	0.32	+1.9
4,795,845	+		DZA65_RS22175	0.32	+1.3
4,795,845	+		DZA65_RS22175	0.32	-0.9
4,795,845	+		DZA65_RS22175	0.32	-0.3
4,795,845	+		DZA65_RS22175	0.32	-0.1
4,795,845	+		DZA65_RS22175	0.32	-0.7
4,795,845	+		DZA65_RS22175	0.32	+1.9
4,795,845	+		DZA65_RS22175	0.32	-0.9
4,795,846	-		DZA65_RS22175	0.32	-1.1
4,795,846	-		DZA65_RS22175	0.32	-1.9
4,795,846	-		DZA65_RS22175	0.32	-1.6
4,795,846	-		DZA65_RS22175	0.32	-1.9
4,795,846	-		DZA65_RS22175	0.32	-0.1
4,795,846	-		DZA65_RS22175	0.32	-0.2
4,795,846	-		DZA65_RS22175	0.32	+0.3
4,795,846	-		DZA65_RS22175	0.32	+0.9
4,795,848	+		DZA65_RS22175	0.32	-0.1
4,795,848	+		DZA65_RS22175	0.32	+1.1
4,795,848	+		DZA65_RS22175	0.32	-0.8
4,795,848	+		DZA65_RS22175	0.32	-0.4
4,795,848	+		DZA65_RS22175	0.32	+0.0
4,795,848	+		DZA65_RS22175	0.32	-0.6
4,795,848	+		DZA65_RS22175	0.32	-0.6
4,795,848	+		DZA65_RS22175	0.32	+0.0
4,795,848	+		DZA65_RS22175	0.32	-0.6
4,795,849	-		DZA65_RS22175	0.32	-0.4
4,795,849	-		DZA65_RS22175	0.32	-2.4
4,795,849	-		DZA65_RS22175	0.32	-0.1
4,795,849	-		DZA65_RS22175	0.32	+1.9
4,795,849	-		DZA65_RS22175	0.32	-0.9
4,795,849	-		DZA65_RS22175	0.32	-0.1
4,795,849	-		DZA65_RS22175	0.32	-0.5
4,795,849	-		DZA65_RS22175	0.32	-2.6
4,795,964	-		DZA65_RS22175	0.38	-1.4
4,796,375	+		DZA65_RS22175	0.62	+0.4
4,796,376	-		DZA65_RS22175	0.62	+0.9
4,796,376	-		DZA65_RS22175	0.62	-0.1
4,796,467	+		DZA65_RS22175	0.67	-0.3
4,796,467	+		DZA65_RS22175	0.67	-0.3
4,796,482	+		DZA65_RS22175	0.68	-2.4
4,796,482	+		DZA65_RS22175	0.68	-0.4
4,796,482	+		DZA65_RS22175	0.68	-0.6
4,796,485	+		DZA65_RS22175	0.68	-0.0
4,796,509	+		DZA65_RS22175	0.70	-0.3
4,796,692	+		DZA65_RS22175	0.80	-2.1
4,796,752	+		DZA65_RS22175	0.83	-0.4
4,796,853	+		DZA65_RS22175	0.89	+0.2
4,796,853	+		DZA65_RS22175	0.89	+0.4
4,796,853	+		DZA65_RS22175	0.89	-1.9
4,796,854	-		DZA65_RS22175	0.89	-0.8
4,796,891	-				-0.2
4,797,038	+				-0.6
4,797,038	+				+0.4
4,797,038	+				+0.0
4,797,038	+				-0.4
4,797,039	-				-1.1
4,797,039	-				-0.3
4,797,039	-				-1.1
4,797,039	-				-0.8
4,797,039	-				+0.9
4,797,042	+				+0.8
4,797,042	+				+0.9
4,797,042	+				-0.3
4,797,042	+				+0.5
4,797,042	+				+1.1
4,797,042	+				-2.2
4,797,043	-				-0.3
4,797,043	-				-2.1
4,797,043	-				-0.1
4,797,043	-				-2.1
4,797,043	-				-0.0
4,797,043	-				+0.2
4,797,043	-				-0.6
4,797,043	-				-0.1
4,797,054	+				+0.6
4,797,054	+				+0.4
4,797,054	+				+1.2
4,797,054	+				+0.4
4,797,054	+				+0.6
4,797,054	+				-2.1
4,797,055	-				-0.7
4,797,055	-				+0.2
4,797,055	-				-1.1
4,797,055	-				-0.6
4,797,087	+				-0.2
4,797,087	+				+1.3
4,797,087	+				+1.9
4,797,106	+				-1.6
4,797,166	+				-0.1
4,797,166	+				-0.1
4,797,166	+				-1.2
4,797,166	+				-1.6
4,797,166	+				+0.8
4,797,166	+				-0.3
4,797,166	+				-1.8
4,797,166	+				+0.9
4,797,166	+				-0.1
4,797,166	+				-0.2
4,797,166	+				-0.3
4,797,166	+				+0.6
4,797,166	+				-0.1
4,797,167	-				-1.1
4,797,167	-				-0.1
4,797,167	-				-1.4
4,797,167	-				-0.9
4,797,167	-				+1.7
4,797,167	-				-1.9
4,797,167	-				+0.2
4,797,167	-				-0.8
4,797,170	+				-0.6
4,797,170	+				-2.1
4,797,170	+				+0.9
4,797,170	+				+1.1
4,797,170	+				-0.1
4,797,170	+				-1.1
4,797,170	+				-2.1
4,797,171	-				+0.5
4,797,171	-				-0.1
4,797,171	-				+0.2
4,797,171	-				-0.2
4,797,171	-				-0.8
4,797,171	-				+0.9
4,797,171	-				+0.1
4,797,171	-				+1.4
4,797,171	-				-0.1
4,797,195	-				-0.1
4,797,347	+		DZA65_RS22180	0.26	+0.7
4,797,347	+		DZA65_RS22180	0.26	-1.1
4,797,347	+				-0.1
4,797,347	+		DZA65_RS22180	0.26	+0.6
4,797,390	-		DZA65_RS22180	0.30	-1.1
4,797,390	-		DZA65_RS22180	0.30	-1.4
4,797,390	-		DZA65_RS22180	0.30	-0.6
4,797,390	-		DZA65_RS22180	0.30	-0.6
4,797,390	-		DZA65_RS22180	0.30	-1.2
4,797,443	+		DZA65_RS22180	0.36	+0.5
4,797,443	+		DZA65_RS22180	0.36	-0.6
4,797,443	+		DZA65_RS22180	0.36	-0.6
4,797,444	-		DZA65_RS22180	0.36	-0.2
4,797,444	-		DZA65_RS22180	0.36	+0.2
4,797,444	-		DZA65_RS22180	0.36	+1.5
4,797,444	-		DZA65_RS22180	0.36	+1.2
4,797,444	-		DZA65_RS22180	0.36	-2.6
4,797,483	-		DZA65_RS22180	0.40	+0.9
4,797,502	+		DZA65_RS22180	0.42	-2.1
4,797,502	+		DZA65_RS22180	0.42	+0.9
4,797,503	-		DZA65_RS22180	0.42	-1.4
4,797,503	-		DZA65_RS22180	0.42	+0.0
4,797,503	-		DZA65_RS22180	0.42	-1.1
4,797,503	-		DZA65_RS22180	0.42	-1.1
4,797,512	+		DZA65_RS22180	0.43	+0.5
4,797,533	+		DZA65_RS22180	0.45	-0.5
4,797,533	+		DZA65_RS22180	0.45	-0.8
4,797,534	-		DZA65_RS22180	0.46	-3.0
4,797,550	+		DZA65_RS22180	0.47	-0.4
4,797,551	-		DZA65_RS22180	0.47	-0.6
4,797,551	-		DZA65_RS22180	0.47	-0.1
4,797,551	-		DZA65_RS22180	0.47	-0.4
4,797,620	+		DZA65_RS22180	0.55	+0.4
4,797,620	+		DZA65_RS22180	0.55	-2.6
4,797,621	-		DZA65_RS22180	0.55	+0.7
4,797,621	-		DZA65_RS22180	0.55	-0.1
4,797,621	-		DZA65_RS22180	0.55	-0.2
4,797,783	+		DZA65_RS22180	0.72	+0.9
4,797,783	+		DZA65_RS22180	0.72	+0.2
4,797,807	+		DZA65_RS22180	0.75	-0.2
4,797,807	+		DZA65_RS22180	0.75	-0.1
4,797,807	+				+2.5
4,797,807	+		DZA65_RS22180	0.75	-2.0
4,797,807	+		DZA65_RS22180	0.75	-0.8
4,797,807	+		DZA65_RS22180	0.75	-0.3
4,797,807	+		DZA65_RS22180	0.75	+0.5
4,797,808	-		DZA65_RS22180	0.75	+2.2
4,797,808	-		DZA65_RS22180	0.75	-0.2
4,797,808	-		DZA65_RS22180	0.75	-3.1
4,797,808	-		DZA65_RS22180	0.75	-1.6
4,797,834	+		DZA65_RS22180	0.77	-1.1
4,797,835	-		DZA65_RS22180	0.77	-1.4
4,797,835	-		DZA65_RS22180	0.77	-0.2
4,797,931	+		DZA65_RS22180	0.88	+1.5
4,797,931	+		DZA65_RS22180	0.88	-0.8
4,797,931	+		DZA65_RS22180	0.88	+0.9
4,797,931	+		DZA65_RS22180	0.88	+0.4
4,797,931	+		DZA65_RS22180	0.88	-0.2
4,797,932	-		DZA65_RS22180	0.88	-1.6
4,797,932	-		DZA65_RS22180	0.88	-1.1
4,797,932	-		DZA65_RS22180	0.88	-0.6
4,797,932	-		DZA65_RS22180	0.88	-0.8
4,797,932	-		DZA65_RS22180	0.88	+0.9
4,797,952	-				-1.1
4,797,972	-				-1.7
4,797,997	+				-1.3
4,798,000	+				-0.1
4,798,000	+				-1.4
4,798,000	+				+0.9
4,798,000	+				-1.2
4,798,000	+				-0.1
4,798,000	+				+0.4
4,798,001	-				-0.1
4,798,001	-				-0.4
4,798,001	-				+3.3
4,798,001	-				-0.1
4,798,001	-				+0.9
4,798,001	-				-0.5
4,798,039	+				-0.6
4,798,039	+				-0.2
4,798,040	-				-0.4