Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21305

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,607,617	+		DZA65_RS21300	0.82	-0.5
4,607,617	+		DZA65_RS21300	0.82	-0.1
4,607,617	+		DZA65_RS21300	0.82	-0.7
4,607,618	-		DZA65_RS21300	0.82	-2.2
4,607,618	-		DZA65_RS21300	0.82	+1.2
4,607,620	+		DZA65_RS21300	0.82	-1.2
4,607,620	+		DZA65_RS21300	0.82	-1.1
4,607,620	+		DZA65_RS21300	0.82	-0.7
4,607,620	+		DZA65_RS21300	0.82	+0.4
4,607,620	+		DZA65_RS21300	0.82	-0.7
4,607,621	-		DZA65_RS21300	0.82	-0.7
4,607,621	-		DZA65_RS21300	0.82	-0.7
4,607,621	-		DZA65_RS21300	0.82	-0.2
4,607,800	+		DZA65_RS21300	0.87	-2.4
4,607,918	+		DZA65_RS21300	0.90	+0.5
4,607,977	+				-0.7
4,607,977	+				-0.8
4,607,978	-				+0.9
4,607,978	-				-0.1
4,607,978	-				+0.6
4,607,978	-				-1.8
4,607,978	-				+0.6
4,607,978	-				+1.2
4,607,978	-				+0.1
4,607,978	-				+2.4
4,607,978	-				-3.2
4,607,978	-				-2.1
4,608,040	+				+0.6
4,608,041	-				-0.4
4,608,127	+				+2.2
4,608,127	+				-0.1
4,608,127	+				+0.4
4,608,127	+				-0.7
4,608,127	+				+1.2
4,608,128	-				-0.7
4,608,128	-				+0.2
4,608,128	-				-1.2
4,608,210	+				-0.5
4,608,229	+				-0.5
4,608,229	+				+0.1
4,608,313	+				-0.5
4,608,314	-				+0.2
4,608,314	-				-2.3
4,608,314	-				-1.9
4,608,314	-				+0.3
4,608,316	+				-0.6
4,608,316	+				-0.9
4,608,316	+				-0.5
4,608,316	+				-0.3
4,608,316	+				-0.9
4,608,316	+				+0.5
4,608,316	+				-1.7
4,608,316	+				-2.3
4,608,316	+				-0.1
4,608,316	+				+1.3
4,608,317	-				+0.9
4,608,317	-				-1.0
4,608,317	-				+0.7
4,608,317	-				-1.7
4,608,317	-				-0.4
4,608,317	-				+0.7
4,608,317	-				-0.7
4,608,317	-				-1.4
4,608,317	-				-0.1
4,608,343	+				+0.9
4,608,343	+				-1.7
4,608,344	-				+0.7
4,608,414	-				+1.6
4,608,414	-				+0.1
4,608,425	+				+0.2
4,608,425	+				-1.3
4,608,425	+				-1.4
4,608,425	+				+2.0
4,608,425	+				+0.8
4,608,426	-				-2.1
4,608,426	-				-0.7
4,608,426	-				+1.3
4,608,427	+				-0.8
4,608,427	+				-1.9
4,608,427	+				-0.1
4,608,427	+				+3.0
4,608,427	+				-0.1
4,608,427	+				+0.3
4,608,427	+				-2.7
4,608,427	+				-2.3
4,608,428	-				-0.1
4,608,428	-				-0.8
4,608,428	-				+0.1
4,608,428	-				-0.5
4,608,428	-				-0.3
4,608,527	+				-2.7
4,608,528	-				+1.2
4,608,649	+				+0.3
4,608,649	+				-0.5
4,608,649	+				-0.3
4,608,649	+				-2.5
4,608,649	+				-1.3
4,608,649	+				+0.2
4,608,649	+				-0.6
4,608,649	+				+0.2
4,608,649	+				-0.9
4,608,649	+				-0.1
4,608,650	-				-0.4
4,608,650	-				+0.4
4,608,650	-				+0.7
4,608,650	-				+1.2
4,608,650	-				-0.1
4,608,653	+				-1.2
4,608,653	+				-0.7
4,608,653	+				+0.9
4,608,653	+				-0.7
4,608,653	+				-0.7
4,608,653	+				+0.7
4,608,653	+				+0.2
4,608,654	-				-0.2
4,608,654	-				+0.9
4,608,654	-				-0.2
4,608,654	-				+0.2
4,608,654	-				+0.1
4,608,712	+				+0.1
4,608,712	+				-0.4
4,608,712	+				+0.3
4,608,712	+				-2.1
4,608,713	-				-0.4
4,608,713	-				-0.5
4,608,713	-				+0.3
4,608,713	-				-1.7
4,608,713	-				+1.5
4,608,713	-				+0.3
4,608,714	+				+1.9
4,608,714	+				+0.6
4,608,714	+				-1.7
4,608,714	+				+1.5
4,608,714	+				+0.0
4,608,714	+				-0.1
4,608,714	+				-1.1
4,608,714	+				-0.1
4,608,714	+				-0.5
4,608,714	+				-0.3
4,608,714	+				+0.0
4,608,715	-				+1.2
4,608,715	-				-0.5
4,608,715	-				-0.7
4,608,715	-				-1.7
4,608,715	-				-0.9
4,608,869	-		DZA65_RS21305	0.17	-1.7
4,608,946	+		DZA65_RS21305	0.23	-1.1
4,608,946	+		DZA65_RS21305	0.23	-1.4
4,608,947	-		DZA65_RS21305	0.23	-0.4
4,608,970	-		DZA65_RS21305	0.24	-1.2
4,608,970	-		DZA65_RS21305	0.24	-0.3
4,609,023	+		DZA65_RS21305	0.28	+0.6
4,609,023	+		DZA65_RS21305	0.28	+0.1
4,609,023	+		DZA65_RS21305	0.28	+0.5
4,609,023	+		DZA65_RS21305	0.28	+0.9
4,609,024	-		DZA65_RS21305	0.28	-0.4
4,609,024	-		DZA65_RS21305	0.28	-1.7
4,609,024	-		DZA65_RS21305	0.28	+2.5
4,609,027	+		DZA65_RS21305	0.28	-0.7
4,609,027	+		DZA65_RS21305	0.28	+0.4
4,609,027	+		DZA65_RS21305	0.28	-0.5
4,609,027	+		DZA65_RS21305	0.28	-0.9
4,609,027	+		DZA65_RS21305	0.28	-0.7
4,609,027	+		DZA65_RS21305	0.28	-0.8
4,609,027	+		DZA65_RS21305	0.28	+1.9
4,609,027	+		DZA65_RS21305	0.28	-0.1
4,609,028	-		DZA65_RS21305	0.28	+0.5
4,609,028	-		DZA65_RS21305	0.28	-0.1
4,609,028	-		DZA65_RS21305	0.28	+0.4
4,609,028	-		DZA65_RS21305	0.28	+0.1
4,609,087	+		DZA65_RS21305	0.32	-1.3
4,609,087	+		DZA65_RS21305	0.32	+0.7
4,609,087	+		DZA65_RS21305	0.32	-0.2
4,609,087	+		DZA65_RS21305	0.32	+0.9
4,609,087	+		DZA65_RS21305	0.32	-1.7
4,609,087	+		DZA65_RS21305	0.32	-1.7
4,609,087	+		DZA65_RS21305	0.32	-0.9
4,609,087	+		DZA65_RS21305	0.32	-0.7
4,609,087	+		DZA65_RS21305	0.32	-0.7
4,609,087	+		DZA65_RS21305	0.32	+0.1
4,609,088	-		DZA65_RS21305	0.32	+0.7
4,609,088	-		DZA65_RS21305	0.32	+0.5
4,609,088	-		DZA65_RS21305	0.32	+0.5
4,609,088	-		DZA65_RS21305	0.32	+1.3
4,609,088	-		DZA65_RS21305	0.32	-1.9
4,609,088	-		DZA65_RS21305	0.32	-1.1
4,609,088	-		DZA65_RS21305	0.32	+0.0
4,609,088	-		DZA65_RS21305	0.32	-0.1
4,609,129	+		DZA65_RS21305	0.35	+1.4
4,609,129	+		DZA65_RS21305	0.35	+0.0
4,609,130	-		DZA65_RS21305	0.35	-0.7
4,609,130	-		DZA65_RS21305	0.35	-1.3
4,609,138	-		DZA65_RS21305	0.35	-0.1
4,609,293	+		DZA65_RS21305	0.46	-0.6
4,609,293	+		DZA65_RS21305	0.46	-0.1
4,609,351	+		DZA65_RS21305	0.50	-0.3
4,609,351	+		DZA65_RS21305	0.50	+0.4
4,609,351	+		DZA65_RS21305	0.50	+0.3
4,609,352	-		DZA65_RS21305	0.50	-0.7
4,609,352	-		DZA65_RS21305	0.50	-1.1
4,609,368	+		DZA65_RS21305	0.51	-0.4
4,609,408	-		DZA65_RS21305	0.53	+0.1
4,609,413	+		DZA65_RS21305	0.54	-0.7
4,609,492	+		DZA65_RS21305	0.59	+1.1
4,609,492	+		DZA65_RS21305	0.59	+0.0
4,609,493	-		DZA65_RS21305	0.59	-1.3
4,609,629	+		DZA65_RS21305	0.68	-1.2
4,609,629	+		DZA65_RS21305	0.68	-1.0
4,609,646	+		DZA65_RS21305	0.69	-0.9
4,609,646	+		DZA65_RS21305	0.69	-0.1
4,609,646	+		DZA65_RS21305	0.69	+0.1
4,609,647	-		DZA65_RS21305	0.69	-1.0
4,609,647	-		DZA65_RS21305	0.69	+0.1
4,609,647	-		DZA65_RS21305	0.69	-0.1
4,609,647	-		DZA65_RS21305	0.69	-0.6
4,609,681	+		DZA65_RS21305	0.72	+1.5
4,609,682	-		DZA65_RS21305	0.72	-1.1
4,609,682	-		DZA65_RS21305	0.72	+1.4
4,609,749	-		DZA65_RS21305	0.76	+0.2
4,609,749	-		DZA65_RS21305	0.76	-0.1
4,609,799	+		DZA65_RS21305	0.79	-0.1
4,609,816	+		DZA65_RS21305	0.81	-1.4
4,609,817	-		DZA65_RS21305	0.81	-0.3
4,609,817	-		DZA65_RS21305	0.81	+1.3
4,609,949	-		DZA65_RS21305	0.89	+1.5
4,609,949	-		DZA65_RS21305	0.89	-0.7
4,609,966	+				+0.5
4,609,967	-				-0.8
4,610,012	+				-0.4
4,610,082	+				-1.7
4,610,082	+				-1.2
4,610,083	-				-0.3
4,610,083	-				+0.3
4,610,120	+				-0.7
4,610,120	+				-0.4
4,610,120	+				+0.7
4,610,120	+				-0.2
4,610,120	+				-0.1
4,610,120	+				-1.1
4,610,120	+				-1.8
4,610,120	+				+1.7
4,610,120	+				+1.9
4,610,120	+				-0.3
4,610,120	+				-0.7
4,610,120	+				-1.0
4,610,120	+				+0.9
4,610,120	+				+0.3
4,610,121	-				+0.2
4,610,121	-				-1.4
4,610,121	-				-0.5
4,610,121	-				-0.1
4,610,121	-				-0.0
4,610,121	-				-0.7
4,610,126	+				-0.5
4,610,126	+				+1.9
4,610,126	+				-0.2
4,610,126	+				-1.4
4,610,126	+				+0.6
4,610,127	-				-0.5
4,610,127	-				+0.9
4,610,127	-				-0.5
4,610,127	-				-0.7
4,610,129	+				+1.7
4,610,129	+				+0.3
4,610,129	+				+0.5
4,610,129	+				-0.4
4,610,129	+				-0.1
4,610,129	+				+0.2
4,610,130	-				-0.3
4,610,130	-				-0.1
4,610,130	-				-0.7
4,610,130	-				-0.4
4,610,136	-				-0.9
4,610,136	-				-0.9
4,610,144	+				-0.7
4,610,184	+				+0.9
4,610,185	-				+0.4
4,610,185	-				+0.0
4,610,185	-				+0.1
4,610,191	+				+1.2
4,610,191	+				+1.5
4,610,191	+				+0.1
4,610,191	+				+0.5
4,610,191	+				+1.2
4,610,192	-				+0.1
4,610,192	-				+0.0
4,610,192	-				-1.9
4,610,192	-				-0.5
4,610,192	-				+1.0
4,610,207	-				-0.9
4,610,215	+				-0.3
4,610,215	+				+1.7
4,610,240	+				+0.4
4,610,240	+				-1.4
4,610,240	+				-0.3
4,610,240	+				-0.8
4,610,240	+				+0.6
4,610,240	+				+0.4
4,610,240	+				-0.5
4,610,240	+				-1.1
4,610,241	-				-1.4
4,610,241	-				+1.1
4,610,241	-				-0.8
4,610,241	-				-1.5
4,610,260	+				-0.5
4,610,261	-				-0.2
4,610,261	-				-0.0
4,610,261	-				+0.1
4,610,261	-				-1.5
4,610,261	-				-0.1
4,610,261	-				-0.4
4,610,261	-				-1.3
4,610,261	-				-0.6
4,610,261	-				+0.6
4,610,261	-				+0.1
4,610,437	+		DZA65_RS21310	0.14	-0.6
4,610,437	+		DZA65_RS21310	0.14	-0.9
4,610,437	+		DZA65_RS21310	0.14	-1.1
4,610,437	+		DZA65_RS21310	0.14	-0.3
4,610,437	+		DZA65_RS21310	0.14	-1.4
4,610,437	+		DZA65_RS21310	0.14	-0.7
4,610,437	+		DZA65_RS21310	0.14	-0.5
4,610,437	+		DZA65_RS21310	0.14	+0.9
4,610,437	+		DZA65_RS21310	0.14	+1.9
4,610,437	+		DZA65_RS21310	0.14	-0.4
4,610,438	-		DZA65_RS21310	0.15	+0.2
4,610,438	-		DZA65_RS21310	0.15	-1.9
4,610,438	-		DZA65_RS21310	0.15	+0.5
4,610,438	-		DZA65_RS21310	0.15	-0.8
4,610,438	-		DZA65_RS21310	0.15	-1.4
4,610,438	-		DZA65_RS21310	0.15	-0.9
4,610,438	-		DZA65_RS21310	0.15	-0.3
4,610,482	+		DZA65_RS21310	0.18	-0.4
4,610,482	+		DZA65_RS21310	0.18	-0.8
4,610,483	-		DZA65_RS21310	0.18	+0.6
4,610,483	-		DZA65_RS21310	0.18	-1.7
4,610,483	-				+0.3
4,610,505	-		DZA65_RS21310	0.19	-0.7
4,610,505	-		DZA65_RS21310	0.19	-0.5
4,610,505	-		DZA65_RS21310	0.19	-1.2
4,610,539	+		DZA65_RS21310	0.21	-0.6
4,610,539	+		DZA65_RS21310	0.21	+0.9
4,610,539	+		DZA65_RS21310	0.21	-1.4
4,610,540	-		DZA65_RS21310	0.21	-1.7
4,610,540	-		DZA65_RS21310	0.21	+1.9
4,610,540	-		DZA65_RS21310	0.21	-0.5
4,610,540	-		DZA65_RS21310	0.21	-0.0
4,610,543	-		DZA65_RS21310	0.22	+0.8
4,610,543	-		DZA65_RS21310	0.22	-1.0
4,610,607	+		DZA65_RS21310	0.26	-0.3
4,610,607	+		DZA65_RS21310	0.26	-0.2
4,610,607	+		DZA65_RS21310	0.26	+0.9
4,610,608	-		DZA65_RS21310	0.26	-0.4
4,610,608	-		DZA65_RS21310	0.26	-1.7
4,610,641	+		DZA65_RS21310	0.28	+0.1
4,610,641	+		DZA65_RS21310	0.28	-0.4
4,610,642	-		DZA65_RS21310	0.28	-1.4
4,610,642	-		DZA65_RS21310	0.28	-0.5
4,610,642	-		DZA65_RS21310	0.28	+2.2
4,610,956	+		DZA65_RS21310	0.50	-0.1
4,610,956	+		DZA65_RS21310	0.50	+0.9
4,610,957	-		DZA65_RS21310	0.50	-0.7
4,610,957	-		DZA65_RS21310	0.50	-0.0