Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21045

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,549,791	-		DZA65_RS21035	0.79	+0.7
4,549,791	-		DZA65_RS21035	0.79	+0.3
4,549,851	+		DZA65_RS21035	0.89	+0.6
4,549,851	+		DZA65_RS21035	0.89	-0.4
4,549,851	+		DZA65_RS21035	0.89	+1.2
4,549,851	+		DZA65_RS21035	0.89	-0.7
4,549,852	-		DZA65_RS21035	0.89	+0.8
4,549,938	+				-0.1
4,549,938	+				+0.3
4,549,938	+				+0.2
4,549,938	+				-0.1
4,549,938	+				-2.7
4,549,938	+				-0.3
4,549,938	+				-0.2
4,549,938	+				+1.7
4,549,938	+				+0.4
4,549,938	+				+0.3
4,549,939	-				-1.1
4,549,939	-				+2.9
4,549,948	+				-0.3
4,549,948	+				-1.3
4,549,948	+				+0.6
4,549,948	+				+0.3
4,549,948	+				-1.1
4,549,948	+				+1.4
4,549,948	+				-0.4
4,549,948	+				+0.3
4,549,949	-				+0.1
4,549,950	+				-1.5
4,549,950	+				-0.1
4,549,950	+				+2.5
4,549,950	+				+0.9
4,549,950	+				-0.3
4,549,950	+				+0.3
4,549,950	+				+0.4
4,549,950	+				-0.1
4,549,950	+				+1.4
4,549,950	+				-1.7
4,549,950	+				-1.1
4,549,951	-				+0.4
4,549,951	-				+0.3
4,549,951	-				+2.9
4,549,951	-				+0.2
4,549,951	-				+0.9
4,549,951	-				+0.2
4,549,951	-				+2.5
4,549,951	-				-0.9
4,549,951	-				+0.2
4,550,008	+				+0.2
4,550,008	+				+1.0
4,550,009	-				-0.4
4,550,009	-				-0.9
4,550,014	-				+0.9
4,550,014	-				-0.4
4,550,025	+				+0.3
4,550,270	+		DZA65_RS21040	0.37	+1.5
4,550,270	+		DZA65_RS21040	0.37	+0.7
4,550,270	+		DZA65_RS21040	0.37	-0.7
4,550,270	+		DZA65_RS21040	0.37	-0.3
4,550,270	+		DZA65_RS21040	0.37	+1.2
4,550,270	+		DZA65_RS21040	0.37	-0.3
4,550,271	-		DZA65_RS21040	0.37	-1.8
4,550,271	-		DZA65_RS21040	0.37	-0.4
4,550,271	-		DZA65_RS21040	0.37	+1.1
4,550,379	+		DZA65_RS21040	0.54	-0.5
4,550,380	-				+2.5
4,550,380	-		DZA65_RS21040	0.54	+0.1
4,550,423	+		DZA65_RS21040	0.61	+0.3
4,550,423	+		DZA65_RS21040	0.61	+1.2
4,550,423	+		DZA65_RS21040	0.61	-0.2
4,550,424	-		DZA65_RS21040	0.61	+0.0
4,550,424	-		DZA65_RS21040	0.61	+0.1
4,550,424	-		DZA65_RS21040	0.61	+0.3
4,550,424	-		DZA65_RS21040	0.61	+0.2
4,550,424	-		DZA65_RS21040	0.61	-0.1
4,550,476	+		DZA65_RS21040	0.70	-1.3
4,550,485	+		DZA65_RS21040	0.71	+0.2
4,550,485	+		DZA65_RS21040	0.71	+0.2
4,550,529	+		DZA65_RS21040	0.78	+0.2
4,550,530	-		DZA65_RS21040	0.78	+1.0
4,550,530	-		DZA65_RS21040	0.78	-0.1
4,550,711	+				-2.3
4,550,711	+				-0.7
4,550,712	-				+2.2
4,550,712	-				-0.7
4,550,712	-				+1.1
4,550,740	+				+0.3
4,550,740	+				+0.6
4,550,740	+				+0.2
4,550,741	-				+0.9
4,550,741	-				+1.7
4,550,741	-				+0.3
4,550,741	-				-0.8
4,550,741	-				-0.7
4,550,741	-				+0.6
4,550,741	-				+1.6
4,550,741	-				+2.3
4,550,783	+				+1.5
4,550,783	+				-0.8
4,550,784	-				-1.0
4,550,895	-				-1.6
4,550,905	+				-0.5
4,550,905	+				-0.7
4,550,905	+				+0.3
4,550,940	-		DZA65_RS21045	0.11	+0.7
4,550,940	-		DZA65_RS21045	0.11	-1.0
4,550,970	-		DZA65_RS21045	0.12	+0.6
4,550,970	-		DZA65_RS21045	0.12	-2.3
4,550,970	-		DZA65_RS21045	0.12	+0.9
4,550,977	+		DZA65_RS21045	0.13	-0.3
4,550,977	+		DZA65_RS21045	0.13	-0.2
4,550,981	+		DZA65_RS21045	0.13	+0.0
4,550,989	+		DZA65_RS21045	0.13	-0.6
4,551,182	+		DZA65_RS21045	0.24	-2.3
4,551,182	+		DZA65_RS21045	0.24	-0.2
4,551,182	+		DZA65_RS21045	0.24	+0.9
4,551,183	-		DZA65_RS21045	0.24	+0.1
4,551,183	-		DZA65_RS21045	0.24	-0.3
4,551,183	-		DZA65_RS21045	0.24	-0.0
4,551,200	-		DZA65_RS21045	0.25	-0.3
4,551,200	-		DZA65_RS21045	0.25	-0.1
4,551,271	+		DZA65_RS21045	0.29	+1.2
4,551,271	+		DZA65_RS21045	0.29	-0.9
4,551,271	+		DZA65_RS21045	0.29	-2.4
4,551,272	-		DZA65_RS21045	0.29	-0.4
4,551,272	-		DZA65_RS21045	0.29	-0.8
4,551,344	-		DZA65_RS21045	0.33	-0.8
4,551,409	+		DZA65_RS21045	0.36	+0.6
4,551,409	+		DZA65_RS21045	0.36	-0.2
4,551,410	-		DZA65_RS21045	0.37	-1.1
4,551,410	-		DZA65_RS21045	0.37	+1.3
4,551,410	-		DZA65_RS21045	0.37	+0.1
4,551,410	-		DZA65_RS21045	0.37	-1.1
4,551,410	-		DZA65_RS21045	0.37	-0.7
4,551,410	-		DZA65_RS21045	0.37	+0.3
4,551,553	+		DZA65_RS21045	0.44	-0.1
4,551,553	+		DZA65_RS21045	0.44	-1.4
4,551,553	+		DZA65_RS21045	0.44	+0.1
4,551,610	+		DZA65_RS21045	0.47	+0.7
4,551,610	+		DZA65_RS21045	0.47	-0.4
4,551,610	+		DZA65_RS21045	0.47	-2.6
4,551,611	-		DZA65_RS21045	0.47	+0.2
4,551,613	+		DZA65_RS21045	0.48	-0.0
4,551,613	+		DZA65_RS21045	0.48	-1.4
4,551,614	-		DZA65_RS21045	0.48	-0.7
4,551,614	-		DZA65_RS21045	0.48	+0.7
4,551,614	-		DZA65_RS21045	0.48	+0.0
4,551,614	-		DZA65_RS21045	0.48	-1.3
4,551,614	-		DZA65_RS21045	0.48	-1.6
4,551,614	-		DZA65_RS21045	0.48	+0.3
4,551,614	-		DZA65_RS21045	0.48	+1.5
4,551,614	-		DZA65_RS21045	0.48	-2.4
4,551,614	-		DZA65_RS21045	0.48	-2.1
4,551,623	+		DZA65_RS21045	0.48	-0.3
4,551,663	-		DZA65_RS21045	0.50	-0.3
4,551,663	-		DZA65_RS21045	0.50	-0.4
4,551,663	-		DZA65_RS21045	0.50	-1.1
4,551,663	-		DZA65_RS21045	0.50	-1.7
4,551,663	-		DZA65_RS21045	0.50	-0.7
4,551,663	-		DZA65_RS21045	0.50	-0.3
4,551,663	-		DZA65_RS21045	0.50	-2.1
4,551,776	-		DZA65_RS21045	0.57	+0.3
4,551,847	+		DZA65_RS21045	0.60	+0.6
4,551,848	-		DZA65_RS21045	0.60	-1.7
4,551,848	-		DZA65_RS21045	0.60	+0.2
4,551,848	-		DZA65_RS21045	0.60	+1.3
4,551,879	+		DZA65_RS21045	0.62	+0.0
4,551,879	+		DZA65_RS21045	0.62	+0.3
4,551,879	+		DZA65_RS21045	0.62	+0.6
4,551,880	-		DZA65_RS21045	0.62	+1.0
4,551,880	-		DZA65_RS21045	0.62	-1.0
4,551,880	-		DZA65_RS21045	0.62	-0.1
4,551,880	-		DZA65_RS21045	0.62	-2.6
4,551,880	-		DZA65_RS21045	0.62	-0.7
4,551,959	+		DZA65_RS21045	0.67	+0.5
4,551,960	-		DZA65_RS21045	0.67	-2.7
4,551,965	+		DZA65_RS21045	0.67	+0.2
4,552,068	+		DZA65_RS21045	0.72	-2.3
4,552,069	-		DZA65_RS21045	0.73	-1.4
4,552,069	-		DZA65_RS21045	0.73	-0.4
4,552,087	+		DZA65_RS21045	0.73	-1.4
4,552,145	+		DZA65_RS21045	0.77	+0.1
4,552,145	+		DZA65_RS21045	0.77	+0.7
4,552,146	-		DZA65_RS21045	0.77	-0.3
4,552,213	+		DZA65_RS21045	0.80	+0.1
4,552,213	+		DZA65_RS21045	0.80	-1.1
4,552,213	+		DZA65_RS21045	0.80	-2.3
4,552,213	+		DZA65_RS21045	0.80	-0.2
4,552,213	+		DZA65_RS21045	0.80	-1.3
4,552,213	+		DZA65_RS21045	0.80	+0.7
4,552,213	+		DZA65_RS21045	0.80	-0.3
4,552,213	+		DZA65_RS21045	0.80	-0.4
4,552,213	+		DZA65_RS21045	0.80	+0.9
4,552,213	+		DZA65_RS21045	0.80	-1.7
4,552,213	+		DZA65_RS21045	0.80	+0.3
4,552,214	-		DZA65_RS21045	0.80	+0.9
4,552,214	-		DZA65_RS21045	0.80	+1.6
4,552,214	-		DZA65_RS21045	0.80	-1.9
4,552,214	-		DZA65_RS21045	0.80	+0.7
4,552,214	-		DZA65_RS21045	0.80	+0.1
4,552,214	-		DZA65_RS21045	0.80	+1.7
4,552,214	-		DZA65_RS21045	0.80	-0.9
4,552,309	+		DZA65_RS21045	0.86	+0.6
4,552,310	-		DZA65_RS21045	0.86	-1.1
4,552,310	-		DZA65_RS21045	0.86	-1.1
4,552,402	+				+0.9
4,552,402	+				+0.9
4,552,436	+				+1.7
4,552,473	-				+0.2
4,552,473	-				+0.5
4,552,504	+				+0.6
4,552,505	-				-2.3
4,552,554	+				-0.2
4,552,554	+				-1.5
4,552,554	+				-0.1
4,552,555	-				-0.5
4,552,555	-				+0.1
4,552,592	-				+0.9
4,552,613	-				+0.6
4,552,613	-				-0.0
4,552,613	-				-1.0
4,552,617	-				-0.7
4,552,617	-				+0.0
4,552,731	+				-0.7
4,552,731	+				+2.0
4,552,732	-				-0.1
4,552,732	-				+0.3
4,552,732	-				+1.1
4,552,732	-				+0.1
4,552,732	-				+2.0
4,552,732	-				+0.1
4,552,732	-				+1.1
4,552,732	-				+0.4
4,552,732	-				-0.1
4,552,778	+		DZA65_RS21050	0.64	+0.7
4,552,778	+		DZA65_RS21050	0.64	+0.5
4,552,778	+		DZA65_RS21050	0.64	+1.9
4,552,815	+				+0.7
4,552,816	-				+0.9
4,552,816	-				+0.9
4,552,824	+				+0.1
4,552,829	+				+1.3
4,552,829	+				-1.6
4,552,829	+				+0.3
4,552,829	+				-0.2
4,552,829	+				-0.3
4,552,829	+				-0.4
4,552,830	-				-0.4
4,552,830	-				-0.4
4,552,830	-				+1.4
4,552,830	-				+0.7
4,552,830	-				-0.4
4,552,830	-				+1.4
4,552,830	-				+0.7
4,552,866	+				+1.3
4,552,866	+				-0.3
4,552,866	+				-1.0
4,552,866	+				-0.3
4,552,866	+				-1.1
4,552,866	+				+0.3
4,552,866	+				-0.7
4,552,867	-				-0.7
4,552,867	-				-1.0
4,552,867	-				-0.6
4,552,867	-				+0.4
4,552,867	-				+0.5
4,552,867	-				+0.3
4,552,867	-				+0.6
4,552,867	-				+0.4
4,552,867	-				-1.0
4,552,867	-				+0.2
4,552,867	-				+0.7
4,552,867	-				-1.1
4,552,868	+				+1.5
4,552,894	+				-1.1
4,552,895	-				-2.0
4,552,920	+				+0.1
4,552,931	+				+0.9
4,552,985	+				-1.1
4,552,985	+				+0.2
4,552,985	+				-1.2
4,552,985	+				-0.1
4,552,985	+				-2.3
4,552,986	-				+1.2
4,552,986	-				-0.6
4,552,986	-				+0.4
4,552,986	-				+0.9
4,552,986	-				-0.7
4,552,988	+				+1.3
4,552,988	+				+0.0
4,552,988	+				+1.1
4,552,989	-				+0.3
4,552,989	-				+0.2
4,552,989	-				-0.0
4,552,989	-				-0.2
4,552,989	-				-0.1
4,552,989	-				+0.5
4,552,989	-				+0.5
4,552,989	-				-0.7
4,552,989	-				-3.0
4,552,989	-				+0.7
4,553,011	+				+0.6
4,553,011	+				-1.1
4,553,011	+				+1.0
4,553,011	+				-1.0
4,553,011	+				-1.4
4,553,011	+				-0.7
4,553,011	+				-1.3
4,553,011	+				-0.1
4,553,011	+				+0.4
4,553,011	+				+0.6
4,553,011	+				-0.0
4,553,011	+				-0.8
4,553,011	+				-0.7
4,553,011	+				+1.1
4,553,011	+				+0.9
4,553,011	+				-1.1
4,553,011	+				-0.2
4,553,011	+				+0.9
4,553,011	+				+0.3
4,553,011	+				+1.4
4,553,011	+				+1.0
4,553,011	+				-0.2
4,553,011	+				-1.3
4,553,011	+				-2.6
4,553,011	+				-0.5
4,553,011	+				-0.3
4,553,011	+				+0.5
4,553,011	+				-0.1
4,553,011	+				+0.5
4,553,011	+				-0.5
4,553,012	-				+0.6
4,553,012	-				-1.0
4,553,012	-				-0.7
4,553,012	-				+0.9
4,553,012	-				-0.4
4,553,012	-				-2.3
4,553,012	-				-0.8
4,553,012	-				+0.8
4,553,012	-				-0.9
4,553,012	-				-0.8
4,553,012	-				-0.1
4,553,012	-				+0.9
4,553,012	-				+0.2
4,553,012	-				-1.1
4,553,012	-				+2.5
4,553,012	-				-0.2
4,553,012	-				-0.2
4,553,012	-				-0.5
4,553,012	-				+0.9
4,553,012	-				-2.4
4,553,012	-				+0.9
4,553,036	+		DZA65_RS21055	0.12	-0.6
4,553,037	-		DZA65_RS21055	0.12	-1.1
4,553,037	-		DZA65_RS21055	0.12	+0.2
4,553,040	+		DZA65_RS21055	0.13	+1.3
4,553,040	+		DZA65_RS21055	0.13	-1.1
4,553,040	+		DZA65_RS21055	0.13	+2.2
4,553,040	+		DZA65_RS21055	0.13	-1.5
4,553,040	+		DZA65_RS21055	0.13	-0.0
4,553,040	+		DZA65_RS21055	0.13	-0.6
4,553,041	-		DZA65_RS21055	0.13	+1.1
4,553,041	-		DZA65_RS21055	0.13	+0.6
4,553,107	+		DZA65_RS21055	0.27	+0.0
4,553,304	+		DZA65_RS21055	0.69	-0.2
4,553,304	+		DZA65_RS21055	0.69	+0.5
4,553,304	+		DZA65_RS21055	0.69	-0.5
4,553,305	-		DZA65_RS21055	0.69	+1.2
4,553,305	-		DZA65_RS21055	0.69	+0.2
4,553,305	-		DZA65_RS21055	0.69	-0.2
4,553,305	-		DZA65_RS21055	0.69	-1.1
4,553,367	-				+0.3
4,553,392	+		DZA65_RS21055	0.87	-0.6
4,553,392	+		DZA65_RS21055	0.87	+0.6
4,553,393	-		DZA65_RS21055	0.88	+0.1
4,553,393	-		DZA65_RS21055	0.88	-1.1
4,553,393	-		DZA65_RS21055	0.88	-0.1
4,553,393	-		DZA65_RS21055	0.88	-1.2
4,553,396	+		DZA65_RS21055	0.88	+0.9
4,553,397	-		DZA65_RS21055	0.89	-0.2
4,553,436	+				-1.0
4,553,436	+				+1.7
4,553,436	+				+1.3
4,553,436	+				-0.7
4,553,436	+				+0.7
4,553,436	+				-0.1
4,553,436	+				-0.5
4,553,436	+				-0.2
4,553,437	-				+0.5
4,553,437	-				-1.9
4,553,437	-				+0.3
4,553,512	+				-1.8
4,553,548	+				+0.3
4,553,548	+				-0.9
4,553,549	-				-1.1
4,553,549	-				-0.4
4,553,549	-				-1.0
4,553,559	-				-1.9
4,553,559	-				+0.0
4,553,559	-				-0.9
4,553,559	-				+1.1
4,553,559	-				+0.3
4,553,559	-				-0.5
4,553,559	-				-1.1