Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20830

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,493,013	+		DZA65_RS20825	0.47	-0.9
4,493,014	-		DZA65_RS20825	0.47	-0.6
4,493,014	-		DZA65_RS20825	0.47	+0.5
4,493,034	-		DZA65_RS20825	0.49	-0.1
4,493,034	-		DZA65_RS20825	0.49	+1.3
4,493,071	+		DZA65_RS20825	0.53	-0.9
4,493,072	-		DZA65_RS20825	0.53	-0.1
4,493,089	+		DZA65_RS20825	0.55	-1.3
4,493,089	+		DZA65_RS20825	0.55	-0.1
4,493,090	-		DZA65_RS20825	0.55	-1.0
4,493,090	-		DZA65_RS20825	0.55	+1.9
4,493,090	-		DZA65_RS20825	0.55	+0.9
4,493,122	-		DZA65_RS20825	0.59	-1.9
4,493,122	-		DZA65_RS20825	0.59	+1.3
4,493,122	-		DZA65_RS20825	0.59	-0.0
4,493,234	+		DZA65_RS20825	0.72	-0.7
4,493,234	+		DZA65_RS20825	0.72	-1.6
4,493,243	+		DZA65_RS20825	0.73	+0.7
4,493,243	+		DZA65_RS20825	0.73	-0.1
4,493,244	-		DZA65_RS20825	0.73	-0.0
4,493,244	-		DZA65_RS20825	0.73	-0.6
4,493,244	-		DZA65_RS20825	0.73	-1.6
4,493,244	-		DZA65_RS20825	0.73	+0.2
4,493,244	-		DZA65_RS20825	0.73	-2.6
4,493,244	-				+1.4
4,493,244	-		DZA65_RS20825	0.73	+0.4
4,493,267	+		DZA65_RS20825	0.76	+1.6
4,493,267	+		DZA65_RS20825	0.76	-1.7
4,493,267	+		DZA65_RS20825	0.76	+0.4
4,493,267	+		DZA65_RS20825	0.76	+0.0
4,493,267	+		DZA65_RS20825	0.76	+0.6
4,493,267	+		DZA65_RS20825	0.76	-0.1
4,493,267	+		DZA65_RS20825	0.76	+0.6
4,493,268	-		DZA65_RS20825	0.76	+0.3
4,493,268	-		DZA65_RS20825	0.76	-0.9
4,493,268	-		DZA65_RS20825	0.76	-0.4
4,493,268	-		DZA65_RS20825	0.76	-0.1
4,493,268	-		DZA65_RS20825	0.76	-0.5
4,493,268	-		DZA65_RS20825	0.76	+0.2
4,493,268	-		DZA65_RS20825	0.76	-1.5
4,493,268	-		DZA65_RS20825	0.76	-0.4
4,493,268	-		DZA65_RS20825	0.76	-1.7
4,493,268	-		DZA65_RS20825	0.76	-0.8
4,493,268	-		DZA65_RS20825	0.76	-0.1
4,493,268	-		DZA65_RS20825	0.76	+1.1
4,493,268	-		DZA65_RS20825	0.76	+1.3
4,493,359	+		DZA65_RS20825	0.86	-1.1
4,493,359	+		DZA65_RS20825	0.86	+0.9
4,493,360	-		DZA65_RS20825	0.86	-0.6
4,493,399	+				-0.1
4,493,400	-				-1.3
4,493,414	+				-0.1
4,493,415	-				-1.1
4,493,415	-				-1.1
4,493,415	-				-1.5
4,493,415	-				-0.1
4,493,415	-				+0.1
4,493,415	-				+0.1
4,493,434	+				+0.9
4,493,467	+				-0.6
4,493,467	+				-0.1
4,493,467	+				+0.5
4,493,467	+				+1.2
4,493,467	+				+1.0
4,493,467	+				-0.1
4,493,467	+				-0.1
4,493,468	-				+0.4
4,493,468	-				+0.1
4,493,468	-				+0.4
4,493,505	-				+1.6
4,493,505	-				+0.6
4,493,505	-				-0.6
4,493,507	+				+0.4
4,493,508	-				+0.3
4,493,508	-				+1.3
4,493,537	+				+0.9
4,493,637	+				+1.0
4,493,637	+				-0.6
4,493,638	-				-0.0
4,493,638	-				-0.0
4,493,638	-				+1.6
4,493,638	-				-1.3
4,493,638	-				-0.4
4,493,649	+				-1.1
4,493,649	+				+0.9
4,493,661	+				+0.1
4,493,695	-				+0.3
4,493,707	+				+0.6
4,493,708	-				+0.2
4,493,708	-				-1.1
4,493,713	+				-0.1
4,493,713	+				-1.9
4,493,714	-				-0.1
4,493,714	-				-2.1
4,493,714	-				-0.3
4,493,714	-				+0.9
4,493,716	+				+0.3
4,493,716	+				-0.9
4,493,717	-				-0.5
4,493,717	-				+1.5
4,493,738	+				+0.4
4,493,739	-				-0.6
4,493,739	-				-1.5
4,493,739	-				-0.3
4,493,744	+				+1.6
4,493,745	-				+0.5
4,493,745	-				+0.3
4,493,758	+				+0.5
4,493,759	-				+0.1
4,493,759	-				-0.5
4,493,768	+				+0.6
4,493,790	+				-1.2
4,493,790	+				-0.5
4,493,790	+				+1.9
4,493,790	+				-0.4
4,493,790	+				-0.7
4,493,790	+				+1.1
4,493,791	-				+0.8
4,493,795	+				-1.7
4,493,795	+				-0.7
4,493,796	-				+1.9
4,493,796	-				-0.6
4,493,796	-				+0.2
4,493,796	-				+0.9
4,493,796	-				+1.1
4,493,820	+				+0.9
4,493,820	+				+0.4
4,493,820	+				+0.3
4,493,821	-				+1.4
4,493,821	-				-0.3
4,493,832	+				+0.5
4,493,846	+				+0.4
4,493,847	-				+0.2
4,493,869	+				+0.9
4,493,870	-				-0.4
4,493,870	-				+1.1
4,493,878	-				+0.3
4,493,922	-		DZA65_RS20830	0.11	+0.4
4,493,954	+		DZA65_RS20830	0.13	+0.4
4,493,954	+		DZA65_RS20830	0.13	+1.0
4,493,954	+		DZA65_RS20830	0.13	+0.1
4,493,955	-		DZA65_RS20830	0.13	+0.4
4,493,955	-		DZA65_RS20830	0.13	+1.2
4,493,955	-		DZA65_RS20830	0.13	-1.7
4,493,955	-		DZA65_RS20830	0.13	+0.0
4,493,955	-		DZA65_RS20830	0.13	-0.0
4,493,955	-		DZA65_RS20830	0.13	-0.7
4,493,955	-		DZA65_RS20830	0.13	-0.6
4,493,955	-		DZA65_RS20830	0.13	+0.7
4,493,955	-		DZA65_RS20830	0.13	+1.2
4,493,955	-		DZA65_RS20830	0.13	+0.9
4,493,955	-		DZA65_RS20830	0.13	+1.3
4,493,955	-		DZA65_RS20830	0.13	-0.9
4,493,958	+		DZA65_RS20830	0.13	+0.1
4,493,958	+		DZA65_RS20830	0.13	-2.0
4,493,958	+		DZA65_RS20830	0.13	-0.9
4,493,958	+		DZA65_RS20830	0.13	-1.1
4,493,958	+		DZA65_RS20830	0.13	-0.7
4,493,958	+		DZA65_RS20830	0.13	+0.6
4,493,958	+		DZA65_RS20830	0.13	+0.2
4,493,958	+		DZA65_RS20830	0.13	+0.9
4,493,958	+		DZA65_RS20830	0.13	+0.9
4,493,958	+		DZA65_RS20830	0.13	-0.9
4,493,958	+		DZA65_RS20830	0.13	+0.6
4,493,958	+		DZA65_RS20830	0.13	-0.2
4,493,959	-		DZA65_RS20830	0.13	-2.3
4,493,959	-		DZA65_RS20830	0.13	-1.5
4,493,959	-		DZA65_RS20830	0.13	-2.4
4,493,959	-		DZA65_RS20830	0.13	-0.1
4,493,959	-		DZA65_RS20830	0.13	-0.9
4,493,959	-		DZA65_RS20830	0.13	-0.1
4,493,959	-		DZA65_RS20830	0.13	-0.0
4,493,959	-		DZA65_RS20830	0.13	-0.7
4,493,959	-		DZA65_RS20830	0.13	-0.7
4,493,959	-		DZA65_RS20830	0.13	-1.5
4,493,959	-		DZA65_RS20830	0.13	+0.1
4,493,959	-		DZA65_RS20830	0.13	+0.1
4,493,959	-		DZA65_RS20830	0.13	-1.7
4,493,959	-		DZA65_RS20830	0.13	-1.9
4,493,959	-		DZA65_RS20830	0.13	+1.7
4,493,959	-		DZA65_RS20830	0.13	+0.2
4,493,959	-		DZA65_RS20830	0.13	+0.4
4,493,959	-		DZA65_RS20830	0.13	-0.1
4,493,959	-		DZA65_RS20830	0.13	+2.2
4,493,959	-		DZA65_RS20830	0.13	+0.5
4,494,203	+		DZA65_RS20830	0.28	+0.9
4,494,399	-		DZA65_RS20830	0.40	+0.0
4,494,399	-		DZA65_RS20830	0.40	+2.0
4,494,408	+		DZA65_RS20830	0.41	-0.2
4,494,408	+		DZA65_RS20830	0.41	-0.9
4,494,408	+		DZA65_RS20830	0.41	+0.2
4,494,408	+		DZA65_RS20830	0.41	-0.1
4,494,408	+		DZA65_RS20830	0.41	+0.5
4,494,408	+		DZA65_RS20830	0.41	-2.7
4,494,408	+		DZA65_RS20830	0.41	-0.7
4,494,408	+		DZA65_RS20830	0.41	-0.5
4,494,408	+		DZA65_RS20830	0.41	-0.7
4,494,408	+		DZA65_RS20830	0.41	+0.9
4,494,408	+		DZA65_RS20830	0.41	+0.7
4,494,408	+		DZA65_RS20830	0.41	+0.7
4,494,409	-		DZA65_RS20830	0.41	-0.1
4,494,409	-		DZA65_RS20830	0.41	-0.1
4,494,409	-		DZA65_RS20830	0.41	-0.3
4,494,603	+		DZA65_RS20830	0.53	-0.1
4,494,603	+		DZA65_RS20830	0.53	+1.2
4,494,603	+		DZA65_RS20830	0.53	+0.9
4,494,644	+		DZA65_RS20830	0.55	-0.6
4,494,644	+		DZA65_RS20830	0.55	-0.4
4,494,645	-		DZA65_RS20830	0.55	-1.7
4,494,648	+		DZA65_RS20830	0.55	+0.3
4,494,648	+				-1.1
4,494,649	-		DZA65_RS20830	0.55	-0.0
4,494,649	-				-0.1
4,494,649	-		DZA65_RS20830	0.55	-0.1
4,494,754	-		DZA65_RS20830	0.62	-0.4
4,494,762	+		DZA65_RS20830	0.62	-0.9
4,494,762	+		DZA65_RS20830	0.62	-0.1
4,494,762	+		DZA65_RS20830	0.62	-1.0
4,494,762	+		DZA65_RS20830	0.62	-0.9
4,494,762	+		DZA65_RS20830	0.62	-0.7
4,494,762	+		DZA65_RS20830	0.62	+0.4
4,494,762	+		DZA65_RS20830	0.62	-1.5
4,494,762	+		DZA65_RS20830	0.62	+0.9
4,494,762	+		DZA65_RS20830	0.62	-0.7
4,494,763	-		DZA65_RS20830	0.62	-1.6
4,494,763	-		DZA65_RS20830	0.62	-0.3
4,494,763	-		DZA65_RS20830	0.62	-0.9
4,494,763	-		DZA65_RS20830	0.62	+0.4
4,494,763	-		DZA65_RS20830	0.62	+0.9
4,494,763	-		DZA65_RS20830	0.62	+0.1
4,494,763	-		DZA65_RS20830	0.62	-0.6
4,494,763	-		DZA65_RS20830	0.62	-0.6
4,494,763	-		DZA65_RS20830	0.62	+0.5
4,494,763	-		DZA65_RS20830	0.62	-1.1
4,494,889	-		DZA65_RS20830	0.70	-2.1
4,495,056	+		DZA65_RS20830	0.81	-1.3
4,495,056	+		DZA65_RS20830	0.81	+0.4
4,495,057	-		DZA65_RS20830	0.81	-1.1
4,495,057	-		DZA65_RS20830	0.81	-0.3
4,495,057	-		DZA65_RS20830	0.81	+0.6
4,495,175	+		DZA65_RS20830	0.88	-0.8
4,495,175	+		DZA65_RS20830	0.88	-0.7
4,495,175	+		DZA65_RS20830	0.88	+0.4
4,495,175	+		DZA65_RS20830	0.88	-0.5
4,495,176	-		DZA65_RS20830	0.88	-0.7
4,495,245	+				+0.4
4,495,245	+				+1.4
4,495,245	+				-1.3
4,495,245	+				+0.9
4,495,245	+				-0.9
4,495,245	+				+0.9
4,495,245	+				-1.3
4,495,245	+				-1.3
4,495,245	+				+1.3
4,495,245	+				+0.3
4,495,245	+				+0.3
4,495,245	+				-0.3
4,495,245	+				+1.9
4,495,246	-				+0.3
4,495,246	-				+0.1
4,495,246	-				+1.0
4,495,246	-				+0.3
4,495,246	-				+0.8
4,495,246	-				-0.1
4,495,246	-				-0.7
4,495,246	-				+0.4
4,495,246	-				-0.7
4,495,246	-				+0.3
4,495,246	-				-0.3
4,495,246	-				+0.6
4,495,246	-				-0.9
4,495,246	-				-0.0
4,495,248	-				-0.4
4,495,298	+				-1.2
4,495,298	+				-1.0
4,495,299	-				+0.2
4,495,317	+				-2.1
4,495,317	+				+0.1
4,495,317	+				-1.1
4,495,317	+				-1.1
4,495,318	-				+1.1
4,495,318	-				-1.6
4,495,318	-				-1.6
4,495,318	-				-0.4
4,495,318	-				-0.5
4,495,318	-				-0.1
4,495,318	-				+0.6
4,495,318	-				-1.9
4,495,318	-				-0.5
4,495,318	-				+1.9
4,495,318	-				+0.9
4,495,368	+				+0.6
4,495,378	-				-0.7
4,495,381	+				+0.2
4,495,420	+				-0.5
4,495,461	+				+0.1
4,495,469	+				+2.2
4,495,573	+				+0.3
4,495,573	+				+3.9
4,495,574	-				-0.7
4,495,574	-				-1.1
4,495,574	-				+0.0
4,495,577	+				+0.5
4,495,578	-				+0.6
4,495,578	-				-0.5
4,495,578	-				+0.9
4,495,645	-		DZA65_RS20835	0.13	-2.7
4,495,645	-		DZA65_RS20835	0.13	-0.1
4,495,645	-				-1.5
4,495,648	-		DZA65_RS20835	0.13	-1.7
4,495,895	-				+1.9
4,495,938	-		DZA65_RS20835	0.33	-0.4
4,496,021	+		DZA65_RS20835	0.39	-2.5
4,496,022	-		DZA65_RS20835	0.39	-0.8
4,496,049	+		DZA65_RS20835	0.41	-0.7
4,496,050	-		DZA65_RS20835	0.41	-1.6
4,496,068	-		DZA65_RS20835	0.42	+0.1
4,496,088	-		DZA65_RS20835	0.44	-0.9
4,496,178	+		DZA65_RS20835	0.50	-1.1
4,496,258	+		DZA65_RS20835	0.56	-1.5
4,496,258	+		DZA65_RS20835	0.56	+0.9
4,496,281	-		DZA65_RS20835	0.58	-1.3
4,496,281	-		DZA65_RS20835	0.58	-0.5
4,496,283	+		DZA65_RS20835	0.58	+0.5
4,496,283	+		DZA65_RS20835	0.58	-0.9
4,496,284	-		DZA65_RS20835	0.58	-0.4
4,496,284	-				-1.7
4,496,302	-		DZA65_RS20835	0.59	+0.6