Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20700

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,465,043	-				+1.1
4,465,043	-				+2.0
4,465,093	-		DZA65_RS20695	0.12	-2.5
4,465,125	-		DZA65_RS20695	0.16	+0.3
4,465,160	+		DZA65_RS20695	0.19	-0.8
4,465,160	+		DZA65_RS20695	0.19	+0.3
4,465,160	+		DZA65_RS20695	0.19	-1.7
4,465,161	-		DZA65_RS20695	0.19	+0.6
4,465,161	-		DZA65_RS20695	0.19	+0.5
4,465,179	+		DZA65_RS20695	0.21	-2.7
4,465,180	-		DZA65_RS20695	0.21	+0.4
4,465,180	-		DZA65_RS20695	0.21	+0.0
4,465,308	+		DZA65_RS20695	0.33	-0.3
4,465,322	+		DZA65_RS20695	0.35	-0.8
4,465,323	-		DZA65_RS20695	0.35	+0.8
4,465,323	-		DZA65_RS20695	0.35	+1.5
4,465,325	+		DZA65_RS20695	0.35	+0.8
4,465,326	-		DZA65_RS20695	0.35	-1.0
4,465,348	+		DZA65_RS20695	0.37	+1.4
4,465,348	+		DZA65_RS20695	0.37	-0.2
4,465,348	+		DZA65_RS20695	0.37	+0.1
4,465,349	-		DZA65_RS20695	0.37	+0.6
4,465,359	+		DZA65_RS20695	0.38	+1.4
4,465,360	-		DZA65_RS20695	0.38	-1.3
4,465,390	+		DZA65_RS20695	0.41	+0.9
4,465,390	+		DZA65_RS20695	0.41	+0.3
4,465,390	+		DZA65_RS20695	0.41	-0.6
4,465,390	+		DZA65_RS20695	0.41	-0.5
4,465,390	+		DZA65_RS20695	0.41	-0.9
4,465,390	+		DZA65_RS20695	0.41	+1.3
4,465,390	+		DZA65_RS20695	0.41	-1.7
4,465,390	+		DZA65_RS20695	0.41	+1.6
4,465,390	+		DZA65_RS20695	0.41	+0.8
4,465,391	-		DZA65_RS20695	0.41	+0.8
4,465,391	-		DZA65_RS20695	0.41	+1.1
4,465,391	-		DZA65_RS20695	0.41	+0.1
4,465,391	-		DZA65_RS20695	0.41	-0.5
4,465,479	+		DZA65_RS20695	0.50	+1.0
4,465,490	+		DZA65_RS20695	0.51	+0.8
4,465,490	+		DZA65_RS20695	0.51	+0.8
4,465,490	+		DZA65_RS20695	0.51	-1.3
4,465,490	+		DZA65_RS20695	0.51	+1.8
4,465,490	+		DZA65_RS20695	0.51	+1.0
4,465,490	+		DZA65_RS20695	0.51	-1.1
4,465,491	-		DZA65_RS20695	0.51	-0.1
4,465,491	-		DZA65_RS20695	0.51	-1.2
4,465,491	-		DZA65_RS20695	0.51	+2.8
4,465,491	-		DZA65_RS20695	0.51	-0.5
4,465,491	-		DZA65_RS20695	0.51	-0.2
4,465,491	-		DZA65_RS20695	0.51	+0.8
4,465,498	+		DZA65_RS20695	0.52	-0.9
4,465,498	+		DZA65_RS20695	0.52	-0.4
4,465,498	+		DZA65_RS20695	0.52	+0.0
4,465,498	+		DZA65_RS20695	0.52	-0.0
4,465,498	+		DZA65_RS20695	0.52	-0.5
4,465,498	+		DZA65_RS20695	0.52	+0.1
4,465,498	+		DZA65_RS20695	0.52	+0.3
4,465,498	+		DZA65_RS20695	0.52	+0.2
4,465,498	+		DZA65_RS20695	0.52	+1.7
4,465,498	+		DZA65_RS20695	0.52	-0.1
4,465,498	+		DZA65_RS20695	0.52	-2.3
4,465,498	+		DZA65_RS20695	0.52	+0.6
4,465,498	+		DZA65_RS20695	0.52	-2.3
4,465,498	+		DZA65_RS20695	0.52	-0.6
4,465,498	+		DZA65_RS20695	0.52	+0.6
4,465,499	-		DZA65_RS20695	0.52	-0.6
4,465,499	-		DZA65_RS20695	0.52	+0.0
4,465,499	-		DZA65_RS20695	0.52	+0.8
4,465,500	+		DZA65_RS20695	0.52	+0.1
4,465,501	-		DZA65_RS20695	0.52	-1.5
4,465,527	+		DZA65_RS20695	0.55	+1.2
4,465,527	+		DZA65_RS20695	0.55	-1.1
4,465,528	-		DZA65_RS20695	0.55	+0.3
4,465,528	-		DZA65_RS20695	0.55	+0.1
4,465,528	-		DZA65_RS20695	0.55	+0.3
4,465,528	-		DZA65_RS20695	0.55	+1.4
4,465,529	+		DZA65_RS20695	0.55	+0.4
4,465,529	+		DZA65_RS20695	0.55	-0.5
4,465,529	+		DZA65_RS20695	0.55	-0.6
4,465,529	+		DZA65_RS20695	0.55	+0.3
4,465,529	+		DZA65_RS20695	0.55	-0.7
4,465,627	-		DZA65_RS20695	0.64	-0.3
4,465,628	+		DZA65_RS20695	0.64	+1.3
4,465,628	+				+1.8
4,465,628	+		DZA65_RS20695	0.64	+0.4
4,465,628	+				-0.2
4,465,628	+		DZA65_RS20695	0.64	+0.6
4,465,628	+		DZA65_RS20695	0.64	+0.4
4,465,628	+		DZA65_RS20695	0.64	+0.1
4,465,628	+		DZA65_RS20695	0.64	-0.6
4,465,628	+		DZA65_RS20695	0.64	+0.6
4,465,628	+		DZA65_RS20695	0.64	+0.7
4,465,628	+		DZA65_RS20695	0.64	-1.6
4,465,628	+		DZA65_RS20695	0.64	+0.2
4,465,628	+		DZA65_RS20695	0.64	-1.2
4,465,629	-		DZA65_RS20695	0.64	+0.2
4,465,629	-		DZA65_RS20695	0.64	-0.3
4,465,629	-		DZA65_RS20695	0.64	-0.2
4,465,629	-		DZA65_RS20695	0.64	-0.3
4,465,629	-		DZA65_RS20695	0.64	+2.8
4,465,629	-		DZA65_RS20695	0.64	+0.8
4,465,666	-		DZA65_RS20695	0.68	+0.1
4,465,688	-		DZA65_RS20695	0.70	+1.4
4,465,688	-		DZA65_RS20695	0.70	-0.7
4,465,721	-		DZA65_RS20695	0.73	-0.2
4,465,820	+		DZA65_RS20695	0.83	+0.5
4,465,820	+		DZA65_RS20695	0.83	-0.2
4,465,820	+		DZA65_RS20695	0.83	+0.3
4,465,820	+		DZA65_RS20695	0.83	+0.8
4,465,821	-		DZA65_RS20695	0.83	-0.7
4,465,821	-		DZA65_RS20695	0.83	+0.1
4,465,835	+		DZA65_RS20695	0.84	+1.2
4,465,835	+		DZA65_RS20695	0.84	+0.8
4,465,835	+		DZA65_RS20695	0.84	-1.5
4,465,835	+		DZA65_RS20695	0.84	-1.3
4,465,835	+		DZA65_RS20695	0.84	-0.5
4,465,835	+		DZA65_RS20695	0.84	+0.4
4,465,836	-		DZA65_RS20695	0.84	+0.1
4,465,836	-		DZA65_RS20695	0.84	+0.0
4,465,836	-		DZA65_RS20695	0.84	+0.8
4,465,836	-		DZA65_RS20695	0.84	-2.2
4,465,836	-		DZA65_RS20695	0.84	+0.3
4,465,836	-		DZA65_RS20695	0.84	-2.2
4,465,836	-		DZA65_RS20695	0.84	+1.5
4,465,836	-		DZA65_RS20695	0.84	+0.8
4,465,836	-		DZA65_RS20695	0.84	+0.7
4,465,862	+		DZA65_RS20695	0.87	+0.3
4,465,863	-		DZA65_RS20695	0.87	-0.6
4,465,869	+		DZA65_RS20695	0.88	+2.7
4,465,869	+		DZA65_RS20695	0.88	-0.3
4,465,869	+		DZA65_RS20695	0.88	+0.1
4,465,870	-		DZA65_RS20695	0.88	-0.2
4,465,870	-		DZA65_RS20695	0.88	-0.6
4,465,870	-		DZA65_RS20695	0.88	+0.1
4,465,876	-				-0.7
4,465,920	+				-0.7
4,465,920	+				+0.0
4,466,084	+				+0.0
4,466,085	-				+0.4
4,466,288	+		DZA65_RS20700	0.21	-0.9
4,466,288	+		DZA65_RS20700	0.21	-1.5
4,466,288	+		DZA65_RS20700	0.21	-0.2
4,466,289	-		DZA65_RS20700	0.21	-1.6
4,466,415	+		DZA65_RS20700	0.30	+1.6
4,466,415	+		DZA65_RS20700	0.30	-1.1
4,466,415	+		DZA65_RS20700	0.30	+0.0
4,466,415	+		DZA65_RS20700	0.30	+1.3
4,466,416	-		DZA65_RS20700	0.31	-2.3
4,466,416	-		DZA65_RS20700	0.31	+0.7
4,466,416	-		DZA65_RS20700	0.31	+0.3
4,466,416	-		DZA65_RS20700	0.31	-1.5
4,466,416	-		DZA65_RS20700	0.31	-1.5
4,466,416	-		DZA65_RS20700	0.31	-1.7
4,466,465	+		DZA65_RS20700	0.34	+1.8
4,466,465	+		DZA65_RS20700	0.34	+0.8
4,466,465	+		DZA65_RS20700	0.34	-1.0
4,466,465	+		DZA65_RS20700	0.34	+0.1
4,466,465	+		DZA65_RS20700	0.34	+0.3
4,466,465	+		DZA65_RS20700	0.34	+0.8
4,466,465	+		DZA65_RS20700	0.34	+0.3
4,466,465	+		DZA65_RS20700	0.34	-0.4
4,466,466	-		DZA65_RS20700	0.34	-1.5
4,466,466	-		DZA65_RS20700	0.34	-3.2
4,466,466	-		DZA65_RS20700	0.34	-0.4
4,466,466	-		DZA65_RS20700	0.34	+0.0
4,466,486	-		DZA65_RS20700	0.36	-0.7
4,466,486	-		DZA65_RS20700	0.36	-2.6
4,466,486	-		DZA65_RS20700	0.36	-2.0
4,466,486	-		DZA65_RS20700	0.36	-0.7
4,466,486	-		DZA65_RS20700	0.36	+0.4
4,466,499	+		DZA65_RS20700	0.37	-0.8
4,466,500	-		DZA65_RS20700	0.37	+2.7
4,466,586	+		DZA65_RS20700	0.43	+0.1
4,466,586	+		DZA65_RS20700	0.43	-0.2
4,466,586	+		DZA65_RS20700	0.43	+1.2
4,466,587	-		DZA65_RS20700	0.43	+0.6
4,466,587	-		DZA65_RS20700	0.43	-0.3
4,466,587	-		DZA65_RS20700	0.43	-0.9
4,466,587	-		DZA65_RS20700	0.43	+1.1
4,466,587	-		DZA65_RS20700	0.43	-0.9
4,466,587	-		DZA65_RS20700	0.43	-0.2
4,466,587	-		DZA65_RS20700	0.43	-0.2
4,466,587	-		DZA65_RS20700	0.43	+0.6
4,466,587	-		DZA65_RS20700	0.43	-1.1
4,466,587	-		DZA65_RS20700	0.43	-0.9
4,466,622	+		DZA65_RS20700	0.46	+0.1
4,466,623	-		DZA65_RS20700	0.46	-1.1
4,466,623	-		DZA65_RS20700	0.46	+0.6
4,466,663	+		DZA65_RS20700	0.49	-0.9
4,466,664	-		DZA65_RS20700	0.49	-2.3
4,466,664	-		DZA65_RS20700	0.49	-1.0
4,466,674	+		DZA65_RS20700	0.49	+0.5
4,466,674	+		DZA65_RS20700	0.49	-0.7
4,466,675	-		DZA65_RS20700	0.49	-0.2
4,466,922	+		DZA65_RS20700	0.67	+0.1
4,466,923	-		DZA65_RS20700	0.68	+0.1
4,466,929	+		DZA65_RS20700	0.68	-2.2
4,466,929	+		DZA65_RS20700	0.68	+1.3
4,466,930	-		DZA65_RS20700	0.68	-0.3
4,466,930	-		DZA65_RS20700	0.68	+0.3
4,466,930	-		DZA65_RS20700	0.68	-1.5
4,466,940	+		DZA65_RS20700	0.69	-1.1
4,466,940	+		DZA65_RS20700	0.69	-0.4
4,466,940	+		DZA65_RS20700	0.69	-0.2
4,466,941	-		DZA65_RS20700	0.69	+0.5
4,466,941	-		DZA65_RS20700	0.69	+0.7
4,466,941	-		DZA65_RS20700	0.69	-0.2
4,466,941	-		DZA65_RS20700	0.69	-1.7
4,467,069	+		DZA65_RS20700	0.78	-1.0
4,467,108	+		DZA65_RS20700	0.81	-0.8
4,467,108	+		DZA65_RS20700	0.81	+0.2
4,467,111	+		DZA65_RS20700	0.81	-1.0
4,467,112	-		DZA65_RS20700	0.81	-0.2
4,467,112	-		DZA65_RS20700	0.81	-0.9
4,467,112	-		DZA65_RS20700	0.81	+0.6
4,467,146	-		DZA65_RS20700	0.84	-1.2
4,467,146	-		DZA65_RS20700	0.84	+0.4
4,467,153	+		DZA65_RS20700	0.84	-0.2
4,467,154	-		DZA65_RS20700	0.84	-0.2
4,467,154	-		DZA65_RS20700	0.84	-0.2
4,467,292	-				+0.8
4,467,395	+				-0.7
4,467,396	-				+0.2
4,467,396	-				+0.8
4,467,451	-				-0.2
4,467,451	-				-1.7
4,467,451	-				-2.6
4,467,461	-				-1.6
4,467,461	-				-0.3
4,467,499	+				-1.4
4,467,500	-				+0.3
4,467,516	+				-0.4
4,467,516	+				+2.1
4,467,568	+				+0.4
4,467,605	+				-0.2
4,467,652	-				+0.3
4,467,695	+				-1.9
4,467,719	+				-0.4
4,467,719	+				-1.4
4,467,720	-				+0.3
4,467,720	-				+3.7
4,467,720	-				+1.0
4,467,720	-				+0.3
4,467,740	+				-0.2
4,467,740	+				-0.0
4,467,740	+				-1.0
4,467,740	+				-1.4
4,467,740	+				-0.0
4,467,740	+				+0.4
4,467,740	+				-0.3
4,467,740	+				-0.6
4,467,740	+				+0.8
4,467,740	+				-0.2
4,467,741	-				+0.8
4,467,741	-				-2.9
4,467,741	-				+0.0
4,467,741	-				+0.4
4,467,741	-				-0.2
4,467,741	-				-1.0
4,467,741	-				-0.3
4,467,741	-				+0.8
4,467,741	-				+0.1
4,467,741	-				-0.1
4,467,741	-				+0.9
4,467,744	+				-0.6
4,467,744	+				-1.3
4,467,744	+				+0.1
4,467,744	+				+0.1
4,467,744	+				-0.2
4,467,777	+				-0.9
4,467,805	+				-3.5
4,467,805	+				-1.5
4,467,825	+				-1.2
4,467,825	+				+0.6
4,467,825	+				+1.1
4,467,826	-				+0.6
4,467,826	-				-1.9
4,467,860	+				+0.5
4,467,860	+				+0.8
4,467,861	-				-0.7
4,467,861	-				+2.1
4,467,863	+				-1.2
4,467,863	+				-0.0
4,467,863	+				+0.4
4,467,863	+				-0.2
4,467,863	+				+0.2
4,467,863	+				+1.0
4,467,863	+				-1.4
4,467,864	-				+1.3
4,467,864	-				-0.5
4,467,864	-				+0.0
4,467,975	+		DZA65_RS20705	0.13	+0.8
4,467,984	+		DZA65_RS20705	0.14	-0.2
4,467,984	+		DZA65_RS20705	0.14	+0.1
4,467,985	-		DZA65_RS20705	0.14	-0.2
4,467,985	-		DZA65_RS20705	0.14	-1.2
4,468,011	+				+0.4
4,468,011	+		DZA65_RS20705	0.16	+0.6
4,468,012	-		DZA65_RS20705	0.16	-0.9
4,468,012	-		DZA65_RS20705	0.16	-0.7
4,468,012	-		DZA65_RS20705	0.16	-0.7
4,468,018	-		DZA65_RS20705	0.17	+0.1
4,468,018	-		DZA65_RS20705	0.17	-0.8
4,468,057	+		DZA65_RS20705	0.20	+0.4
4,468,057	+		DZA65_RS20705	0.20	+1.7
4,468,057	+		DZA65_RS20705	0.20	+0.4
4,468,057	+		DZA65_RS20705	0.20	+0.4
4,468,057	+		DZA65_RS20705	0.20	-0.6
4,468,057	+		DZA65_RS20705	0.20	-0.6
4,468,057	+		DZA65_RS20705	0.20	-1.2
4,468,057	+		DZA65_RS20705	0.20	-0.4
4,468,057	+		DZA65_RS20705	0.20	+1.3
4,468,058	-		DZA65_RS20705	0.21	-1.1
4,468,058	-		DZA65_RS20705	0.21	-0.4
4,468,058	-		DZA65_RS20705	0.21	-0.2
4,468,058	-		DZA65_RS20705	0.21	-0.0
4,468,058	-		DZA65_RS20705	0.21	-1.0
4,468,058	-		DZA65_RS20705	0.21	+0.8
4,468,058	-		DZA65_RS20705	0.21	-1.2
4,468,060	-		DZA65_RS20705	0.21	-1.4
4,468,060	-		DZA65_RS20705	0.21	+0.1
4,468,101	+		DZA65_RS20705	0.24	+0.8
4,468,101	+		DZA65_RS20705	0.24	-0.7
4,468,102	-		DZA65_RS20705	0.24	-0.2
4,468,204	-		DZA65_RS20705	0.34	+0.6
4,468,213	-				-0.7
4,468,236	-		DZA65_RS20705	0.36	+1.1