Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17530

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,776,872	+		DZA65_RS17520	0.38	+2.2
3,776,917	+		DZA65_RS17520	0.43	+0.9
3,776,917	+		DZA65_RS17520	0.43	-1.1
3,776,917	+		DZA65_RS17520	0.43	-1.0
3,776,918	-		DZA65_RS17520	0.43	-0.3
3,776,918	-		DZA65_RS17520	0.43	-0.2
3,776,918	-		DZA65_RS17520	0.43	-0.2
3,776,918	-		DZA65_RS17520	0.43	-0.4
3,776,927	+		DZA65_RS17520	0.43	+0.1
3,776,928	-		DZA65_RS17520	0.44	-1.4
3,777,037	+		DZA65_RS17520	0.54	+1.2
3,777,037	+		DZA65_RS17520	0.54	-1.0
3,777,069	+		DZA65_RS17520	0.57	+0.3
3,777,069	+		DZA65_RS17520	0.57	-0.3
3,777,069	+		DZA65_RS17520	0.57	+1.2
3,777,070	-		DZA65_RS17520	0.57	+0.3
3,777,070	-		DZA65_RS17520	0.57	-2.2
3,777,070	-		DZA65_RS17520	0.57	-0.9
3,777,070	-		DZA65_RS17520	0.57	+0.3
3,777,211	+		DZA65_RS17520	0.71	-2.0
3,777,211	+		DZA65_RS17520	0.71	+0.9
3,777,211	+		DZA65_RS17520	0.71	+0.3
3,777,211	+		DZA65_RS17520	0.71	+1.1
3,777,211	+		DZA65_RS17520	0.71	-0.8
3,777,211	+		DZA65_RS17520	0.71	+0.3
3,777,211	+		DZA65_RS17520	0.71	+0.2
3,777,211	+		DZA65_RS17520	0.71	+0.2
3,777,211	+		DZA65_RS17520	0.71	+0.3
3,777,211	+		DZA65_RS17520	0.71	-0.1
3,777,212	-		DZA65_RS17520	0.71	-0.6
3,777,212	-		DZA65_RS17520	0.71	-1.4
3,777,212	-		DZA65_RS17520	0.71	-0.2
3,777,212	-		DZA65_RS17520	0.71	+1.2
3,777,212	-		DZA65_RS17520	0.71	+0.7
3,777,212	-		DZA65_RS17520	0.71	+0.6
3,777,215	+		DZA65_RS17520	0.71	+0.5
3,777,215	+		DZA65_RS17520	0.71	+0.2
3,777,215	+		DZA65_RS17520	0.71	-0.7
3,777,216	-		DZA65_RS17520	0.71	-0.2
3,777,216	-		DZA65_RS17520	0.71	-0.3
3,777,216	-		DZA65_RS17520	0.71	-0.0
3,777,458	-				-3.2
3,777,506	+				+0.1
3,777,514	+				-0.5
3,777,530	+				+0.1
3,777,530	+				-0.7
3,777,530	+				-0.2
3,777,530	+				-0.3
3,777,531	-				-1.1
3,777,571	+				+0.3
3,777,591	+				-0.4
3,777,591	+				+0.4
3,777,591	+				-0.2
3,777,594	+				+0.6
3,777,594	+				+0.2
3,777,594	+				+0.6
3,777,594	+				+0.4
3,777,594	+				-1.4
3,777,594	+				-2.0
3,777,594	+				-0.2
3,777,595	-				-1.0
3,777,595	-				-1.4
3,777,595	-				+0.1
3,777,615	+				-0.8
3,777,615	+				+0.3
3,777,615	+				-0.8
3,777,616	-				-2.4
3,777,637	+				+0.0
3,777,692	+				+0.2
3,777,693	-				+0.8
3,777,708	-				-0.9
3,777,712	-				+0.2
3,777,712	-				+0.4
3,777,737	-				-0.1
3,777,737	-				+1.7
3,777,739	+				+0.1
3,777,739	+				-1.7
3,777,740	-				+0.3
3,777,740	-				-0.7
3,777,740	-				+0.2
3,777,743	+				+0.7
3,777,743	+				-0.2
3,777,793	-				-0.6
3,777,807	-				+0.3
3,777,855	+		DZA65_RS17530	0.13	+0.2
3,777,855	+		DZA65_RS17530	0.13	+0.1
3,777,856	-		DZA65_RS17530	0.13	-1.6
3,777,907	+		DZA65_RS17530	0.20	-1.7
3,777,907	+		DZA65_RS17530	0.20	-1.3
3,777,918	+		DZA65_RS17530	0.22	-2.2
3,777,918	+		DZA65_RS17530	0.22	-0.7
3,777,918	+		DZA65_RS17530	0.22	+2.2
3,777,918	+		DZA65_RS17530	0.22	+2.6
3,777,918	+		DZA65_RS17530	0.22	+0.5
3,777,918	+		DZA65_RS17530	0.22	+1.2
3,777,918	+		DZA65_RS17530	0.22	-0.4
3,777,918	+		DZA65_RS17530	0.22	-0.4
3,777,918	+		DZA65_RS17530	0.22	+1.2
3,777,918	+		DZA65_RS17530	0.22	-1.2
3,777,919	-		DZA65_RS17530	0.22	-0.4
3,777,919	-		DZA65_RS17530	0.22	+0.8
3,777,919	-		DZA65_RS17530	0.22	+0.4
3,777,919	-		DZA65_RS17530	0.22	+0.1
3,777,919	-		DZA65_RS17530	0.22	+0.2
3,777,919	-		DZA65_RS17530	0.22	+0.5
3,777,919	-		DZA65_RS17530	0.22	+2.4
3,777,919	-		DZA65_RS17530	0.22	+1.3
3,777,919	-		DZA65_RS17530	0.22	+1.5
3,777,919	-		DZA65_RS17530	0.22	-0.0
3,777,919	-		DZA65_RS17530	0.22	-0.4
3,777,919	-		DZA65_RS17530	0.22	-0.6
3,777,919	-		DZA65_RS17530	0.22	+0.6
3,777,920	+		DZA65_RS17530	0.22	-0.2
3,777,920	+		DZA65_RS17530	0.22	+0.1
3,777,920	+		DZA65_RS17530	0.22	+0.0
3,777,920	+		DZA65_RS17530	0.22	-0.6
3,777,920	+		DZA65_RS17530	0.22	+0.7
3,777,920	+		DZA65_RS17530	0.22	+0.5
3,777,921	-		DZA65_RS17530	0.22	+0.0
3,777,921	-		DZA65_RS17530	0.22	-1.7
3,777,921	-		DZA65_RS17530	0.22	-0.8
3,777,921	-		DZA65_RS17530	0.22	+0.1
3,777,922	+		DZA65_RS17530	0.22	+0.7
3,777,922	+		DZA65_RS17530	0.22	+0.8
3,777,922	+		DZA65_RS17530	0.22	-1.0
3,777,922	+		DZA65_RS17530	0.22	-1.3
3,777,923	-		DZA65_RS17530	0.22	+0.6
3,777,923	-		DZA65_RS17530	0.22	+1.2
3,777,923	-		DZA65_RS17530	0.22	+0.3
3,777,930	-		DZA65_RS17530	0.23	-1.2
3,778,064	-		DZA65_RS17530	0.43	-1.2
3,778,064	-		DZA65_RS17530	0.43	+1.6
3,778,075	-		DZA65_RS17530	0.44	+0.2
3,778,165	+		DZA65_RS17530	0.57	+0.3
3,778,166	-		DZA65_RS17530	0.57	+0.2
3,778,166	-		DZA65_RS17530	0.57	+0.6
3,778,166	-		DZA65_RS17530	0.57	+0.7
3,778,166	-		DZA65_RS17530	0.57	+2.4
3,778,169	+		DZA65_RS17530	0.58	-1.0
3,778,169	+		DZA65_RS17530	0.58	-2.0
3,778,170	-		DZA65_RS17530	0.58	-0.4
3,778,231	+		DZA65_RS17530	0.67	+0.7
3,778,231	+		DZA65_RS17530	0.67	+0.4
3,778,231	+		DZA65_RS17530	0.67	-0.2
3,778,231	+		DZA65_RS17530	0.67	+1.6
3,778,232	-		DZA65_RS17530	0.67	+0.7
3,778,232	-		DZA65_RS17530	0.67	-1.7
3,778,234	+		DZA65_RS17530	0.67	-0.1
3,778,234	+		DZA65_RS17530	0.67	+0.3
3,778,234	+		DZA65_RS17530	0.67	+0.4
3,778,235	-		DZA65_RS17530	0.67	+0.6
3,778,235	-		DZA65_RS17530	0.67	-2.4
3,778,235	-		DZA65_RS17530	0.67	-2.9
3,778,235	-		DZA65_RS17530	0.67	-0.8
3,778,235	-		DZA65_RS17530	0.67	-1.7
3,778,237	+		DZA65_RS17530	0.68	+1.8
3,778,238	-				+1.2
3,778,247	+		DZA65_RS17530	0.69	-1.0
3,778,247	+		DZA65_RS17530	0.69	+0.2
3,778,248	-		DZA65_RS17530	0.69	-0.5
3,778,277	-		DZA65_RS17530	0.73	-0.2
3,778,317	-		DZA65_RS17530	0.79	-1.7
3,778,325	+		DZA65_RS17530	0.80	-0.2
3,778,326	-		DZA65_RS17530	0.81	-0.2
3,778,326	-		DZA65_RS17530	0.81	+0.6
3,778,326	-		DZA65_RS17530	0.81	+0.1
3,778,355	+		DZA65_RS17530	0.85	-0.2
3,778,355	+		DZA65_RS17530	0.85	-0.3
3,778,355	+		DZA65_RS17530	0.85	+1.6
3,778,355	+		DZA65_RS17530	0.85	-0.2
3,778,355	+		DZA65_RS17530	0.85	+0.3
3,778,355	+		DZA65_RS17530	0.85	-0.6
3,778,355	+		DZA65_RS17530	0.85	+0.3
3,778,356	-		DZA65_RS17530	0.85	-1.6
3,778,356	-		DZA65_RS17530	0.85	+0.3
3,778,356	-		DZA65_RS17530	0.85	+0.7
3,778,356	-		DZA65_RS17530	0.85	+0.2
3,778,452	+				-0.2
3,778,452	+				-0.2
3,778,460	+				+0.9
3,778,460	+				-1.2
3,778,460	+				+0.2
3,778,460	+				+0.6
3,778,460	+				-0.4
3,778,460	+				+1.2
3,778,461	-				-1.4
3,778,461	-				+0.1
3,778,461	-				-0.7
3,778,461	-				+0.5
3,778,470	+				+0.3
3,778,471	-				-0.4
3,778,471	-				+1.5
3,778,478	-				+0.3
3,778,478	-				+1.6
3,778,511	+				+1.0
3,778,553	+				+0.6
3,778,586	-				+0.8
3,778,598	+				-1.6
3,778,598	+				+0.3
3,778,598	+				+0.1
3,778,598	+				-1.4
3,778,598	+				+1.6
3,778,598	+				-1.0
3,778,598	+				+0.4
3,778,598	+				-0.7
3,778,599	-				-1.0
3,778,599	-				-0.0
3,778,599	-				+0.6
3,778,599	-				-0.4
3,778,599	-				+0.3
3,778,642	+				-1.0
3,778,642	+				+0.3
3,778,642	+				+1.5
3,778,643	-				+0.3
3,778,662	-				-1.2
3,778,713	+				+0.4
3,778,714	-				+0.9
3,778,866	+		DZA65_RS17535	0.12	+0.3
3,778,930	+		DZA65_RS17535	0.18	-1.4
3,778,930	+		DZA65_RS17535	0.18	+0.7
3,778,930	+		DZA65_RS17535	0.18	-0.1
3,778,930	+				-0.4
3,778,930	+		DZA65_RS17535	0.18	+0.4
3,778,931	-		DZA65_RS17535	0.18	-0.1
3,778,931	-		DZA65_RS17535	0.18	+0.4
3,778,932	+		DZA65_RS17535	0.19	+1.2
3,778,933	-		DZA65_RS17535	0.19	+1.0
3,778,933	-		DZA65_RS17535	0.19	+0.4
3,778,933	-		DZA65_RS17535	0.19	+0.7
3,778,933	-		DZA65_RS17535	0.19	+0.6
3,779,210	-		DZA65_RS17535	0.46	+0.1
3,779,253	+		DZA65_RS17535	0.50	+1.4
3,779,273	+		DZA65_RS17535	0.52	-1.7
3,779,278	+		DZA65_RS17535	0.53	+0.2
3,779,278	+		DZA65_RS17535	0.53	+0.6
3,779,405	-		DZA65_RS17535	0.65	-0.7
3,779,410	+		DZA65_RS17535	0.66	+0.4
3,779,411	-		DZA65_RS17535	0.66	+1.2