Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17515

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,773,843	+		DZA65_RS17510	0.61	+1.1
3,773,910	-		DZA65_RS17510	0.66	+0.8
3,773,910	-		DZA65_RS17510	0.66	+0.3
3,773,910	-		DZA65_RS17510	0.66	-1.2
3,773,937	-		DZA65_RS17510	0.67	-1.1
3,773,995	+		DZA65_RS17510	0.72	-0.3
3,773,996	-		DZA65_RS17510	0.72	-0.3
3,773,996	-		DZA65_RS17510	0.72	+3.2
3,773,999	+		DZA65_RS17510	0.72	-1.4
3,773,999	+		DZA65_RS17510	0.72	+0.2
3,773,999	+		DZA65_RS17510	0.72	-1.6
3,773,999	+		DZA65_RS17510	0.72	-2.2
3,773,999	+		DZA65_RS17510	0.72	+0.8
3,773,999	+		DZA65_RS17510	0.72	+0.6
3,773,999	+		DZA65_RS17510	0.72	-0.2
3,773,999	+		DZA65_RS17510	0.72	-2.6
3,773,999	+		DZA65_RS17510	0.72	-0.2
3,773,999	+		DZA65_RS17510	0.72	-2.4
3,773,999	+		DZA65_RS17510	0.72	-0.7
3,773,999	+		DZA65_RS17510	0.72	+2.0
3,773,999	+		DZA65_RS17510	0.72	+0.1
3,773,999	+		DZA65_RS17510	0.72	+0.6
3,774,000	-		DZA65_RS17510	0.72	+0.1
3,774,000	-		DZA65_RS17510	0.72	-0.2
3,774,000	-		DZA65_RS17510	0.72	+1.2
3,774,000	-		DZA65_RS17510	0.72	+0.9
3,774,000	-		DZA65_RS17510	0.72	-0.4
3,774,000	-		DZA65_RS17510	0.72	+1.1
3,774,000	-		DZA65_RS17510	0.72	-0.7
3,774,000	-		DZA65_RS17510	0.72	+0.9
3,774,000	-		DZA65_RS17510	0.72	-0.2
3,774,000	-		DZA65_RS17510	0.72	-0.6
3,774,000	-		DZA65_RS17510	0.72	+1.4
3,774,000	-		DZA65_RS17510	0.72	+0.8
3,774,000	-		DZA65_RS17510	0.72	+1.6
3,774,000	-		DZA65_RS17510	0.72	-0.4
3,774,000	-		DZA65_RS17510	0.72	+1.1
3,774,000	-		DZA65_RS17510	0.72	+1.6
3,774,000	-		DZA65_RS17510	0.72	-0.0
3,774,000	-		DZA65_RS17510	0.72	-0.3
3,774,000	-		DZA65_RS17510	0.72	-0.6
3,774,065	+		DZA65_RS17510	0.76	-0.8
3,774,065	+		DZA65_RS17510	0.76	+0.8
3,774,065	+		DZA65_RS17510	0.76	-0.3
3,774,065	+		DZA65_RS17510	0.76	+1.6
3,774,065	+		DZA65_RS17510	0.76	-2.2
3,774,097	+		DZA65_RS17510	0.79	-0.3
3,774,097	+		DZA65_RS17510	0.79	-1.5
3,774,098	-		DZA65_RS17510	0.79	-0.4
3,774,098	-		DZA65_RS17510	0.79	-0.2
3,774,123	-		DZA65_RS17510	0.80	-0.0
3,774,399	-				-0.3
3,774,399	-				-0.4
3,774,399	-				+0.0
3,774,544	+				-0.4
3,774,632	-				+0.6
3,774,790	+				-0.6
3,774,824	-				+0.2
3,774,824	-				+0.7
3,774,824	-				+0.8
3,774,824	-				-1.7
3,774,824	-				+0.4
3,774,834	+				+1.2
3,774,835	-				+1.4
3,774,841	+				-1.6
3,774,910	+				-1.4
3,774,997	+		DZA65_RS17515	0.11	+1.3
3,774,997	+		DZA65_RS17515	0.11	+0.4
3,775,084	+		DZA65_RS17515	0.18	+0.3
3,775,084	+		DZA65_RS17515	0.18	+0.6
3,775,084	+		DZA65_RS17515	0.18	+1.1
3,775,085	-		DZA65_RS17515	0.18	-1.7
3,775,085	-		DZA65_RS17515	0.18	+1.1
3,775,088	+		DZA65_RS17515	0.18	-1.0
3,775,088	+		DZA65_RS17515	0.18	+0.6
3,775,088	+		DZA65_RS17515	0.18	-0.7
3,775,088	+		DZA65_RS17515	0.18	-1.0
3,775,088	+		DZA65_RS17515	0.18	+1.3
3,775,088	+		DZA65_RS17515	0.18	+0.2
3,775,088	+		DZA65_RS17515	0.18	-2.6
3,775,088	+		DZA65_RS17515	0.18	+0.2
3,775,088	+		DZA65_RS17515	0.18	+0.8
3,775,089	-		DZA65_RS17515	0.18	-0.5
3,775,089	-		DZA65_RS17515	0.18	+1.5
3,775,089	-		DZA65_RS17515	0.18	-0.2
3,775,089	-		DZA65_RS17515	0.18	-0.4
3,775,089	-		DZA65_RS17515	0.18	-1.4
3,775,089	-		DZA65_RS17515	0.18	+0.3
3,775,089	-		DZA65_RS17515	0.18	-0.7
3,775,089	-		DZA65_RS17515	0.18	-0.1
3,775,117	+		DZA65_RS17515	0.20	+1.1
3,775,342	+		DZA65_RS17515	0.36	+1.2
3,775,343	-		DZA65_RS17515	0.36	-0.5
3,775,498	+		DZA65_RS17515	0.48	-0.4
3,775,849	+		DZA65_RS17515	0.73	+2.0
3,775,849	+		DZA65_RS17515	0.73	-0.2
3,776,128	+				-0.0
3,776,128	+				-0.7
3,776,128	+				+0.2
3,776,129	-				+1.2
3,776,129	-				-0.4
3,776,129	-				-0.9
3,776,129	-				+1.8
3,776,129	-				-1.4
3,776,129	-				-0.4
3,776,295	-				-0.7
3,776,310	+				-0.2
3,776,310	+				-1.6
3,776,310	+				-0.0
3,776,311	-				+0.7
3,776,311	-				-0.0
3,776,311	-				-0.2
3,776,326	+				-0.2
3,776,326	+				-0.1
3,776,327	-				-0.8
3,776,368	+				-0.4
3,776,368	+				-2.0
3,776,369	-				-1.1
3,776,371	-				-0.3
3,776,450	-				-0.2
3,776,558	+				-0.6
3,776,558	+				-1.1
3,776,558	+				-1.0
3,776,558	+				-1.4
3,776,558	+				+2.2
3,776,558	+				+1.3
3,776,558	+				+0.6
3,776,558	+				-0.8
3,776,558	+				+1.5
3,776,558	+				-0.1
3,776,558	+				-2.2
3,776,558	+				-0.2
3,776,558	+				-0.5
3,776,558	+				-1.0
3,776,558	+				+1.7
3,776,558	+				-0.7
3,776,558	+				-0.0
3,776,558	+				-0.1
3,776,558	+				-2.0
3,776,558	+				-0.9
3,776,559	-				-0.3
3,776,559	-				-1.0
3,776,559	-				+0.4
3,776,559	-				+0.2
3,776,559	-				+0.5
3,776,559	-				-1.0
3,776,559	-				+0.6
3,776,559	-				+0.6
3,776,559	-				+1.9
3,776,559	-				-1.7
3,776,584	+		DZA65_RS17520	0.11	+0.6
3,776,584	+		DZA65_RS17520	0.11	+1.2
3,776,585	-		DZA65_RS17520	0.11	-1.3
3,776,585	-		DZA65_RS17520	0.11	-0.2
3,776,623	+		DZA65_RS17520	0.14	+1.3
3,776,623	+		DZA65_RS17520	0.14	+0.6
3,776,623	+		DZA65_RS17520	0.14	-1.1
3,776,623	+		DZA65_RS17520	0.14	-0.4
3,776,624	-		DZA65_RS17520	0.14	+1.0
3,776,624	-		DZA65_RS17520	0.14	-0.2
3,776,660	+		DZA65_RS17520	0.18	+1.6
3,776,661	-		DZA65_RS17520	0.18	-0.3
3,776,661	-		DZA65_RS17520	0.18	-2.0
3,776,701	+		DZA65_RS17520	0.22	-0.2
3,776,701	+		DZA65_RS17520	0.22	+0.4
3,776,701	+		DZA65_RS17520	0.22	-1.0
3,776,701	+		DZA65_RS17520	0.22	+0.6
3,776,701	+		DZA65_RS17520	0.22	+0.9
3,776,701	+		DZA65_RS17520	0.22	+1.2
3,776,701	+		DZA65_RS17520	0.22	+1.9
3,776,701	+		DZA65_RS17520	0.22	-1.2
3,776,701	+		DZA65_RS17520	0.22	-0.2
3,776,701	+		DZA65_RS17520	0.22	-0.2
3,776,701	+		DZA65_RS17520	0.22	-1.2
3,776,701	+		DZA65_RS17520	0.22	+0.1
3,776,701	+		DZA65_RS17520	0.22	-0.8
3,776,701	+		DZA65_RS17520	0.22	+0.9
3,776,701	+		DZA65_RS17520	0.22	+0.1
3,776,701	+		DZA65_RS17520	0.22	-1.6
3,776,702	-		DZA65_RS17520	0.22	-0.3
3,776,702	-		DZA65_RS17520	0.22	+0.6
3,776,702	-		DZA65_RS17520	0.22	+1.9
3,776,702	-		DZA65_RS17520	0.22	+0.3
3,776,702	-		DZA65_RS17520	0.22	-0.7
3,776,702	-		DZA65_RS17520	0.22	+0.1
3,776,872	+		DZA65_RS17520	0.38	+2.2
3,776,917	+		DZA65_RS17520	0.43	+0.9
3,776,917	+		DZA65_RS17520	0.43	-1.1
3,776,917	+		DZA65_RS17520	0.43	-1.0
3,776,918	-		DZA65_RS17520	0.43	-0.3
3,776,918	-		DZA65_RS17520	0.43	-0.2
3,776,918	-		DZA65_RS17520	0.43	-0.2
3,776,918	-		DZA65_RS17520	0.43	-0.4
3,776,927	+		DZA65_RS17520	0.43	+0.1
3,776,928	-		DZA65_RS17520	0.44	-1.4
3,777,037	+		DZA65_RS17520	0.54	+1.2
3,777,037	+		DZA65_RS17520	0.54	-1.0
3,777,069	+		DZA65_RS17520	0.57	+0.3
3,777,069	+		DZA65_RS17520	0.57	-0.3
3,777,069	+		DZA65_RS17520	0.57	+1.2
3,777,070	-		DZA65_RS17520	0.57	+0.3
3,777,070	-		DZA65_RS17520	0.57	-2.2
3,777,070	-		DZA65_RS17520	0.57	-0.9
3,777,070	-		DZA65_RS17520	0.57	+0.3
3,777,211	+		DZA65_RS17520	0.71	-2.0
3,777,211	+		DZA65_RS17520	0.71	+0.9
3,777,211	+		DZA65_RS17520	0.71	+0.3
3,777,211	+		DZA65_RS17520	0.71	+1.1
3,777,211	+		DZA65_RS17520	0.71	-0.8
3,777,211	+		DZA65_RS17520	0.71	+0.3
3,777,211	+		DZA65_RS17520	0.71	+0.2
3,777,211	+		DZA65_RS17520	0.71	+0.2
3,777,211	+		DZA65_RS17520	0.71	+0.3
3,777,211	+		DZA65_RS17520	0.71	-0.1
3,777,212	-		DZA65_RS17520	0.71	-0.6
3,777,212	-		DZA65_RS17520	0.71	-1.4
3,777,212	-		DZA65_RS17520	0.71	-0.2
3,777,212	-		DZA65_RS17520	0.71	+1.2
3,777,212	-		DZA65_RS17520	0.71	+0.7
3,777,212	-		DZA65_RS17520	0.71	+0.6
3,777,215	+		DZA65_RS17520	0.71	+0.5
3,777,215	+		DZA65_RS17520	0.71	+0.2
3,777,215	+		DZA65_RS17520	0.71	-0.7
3,777,216	-		DZA65_RS17520	0.71	-0.2
3,777,216	-		DZA65_RS17520	0.71	-0.3
3,777,216	-		DZA65_RS17520	0.71	-0.0