Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17470

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,761,566	+				+0.3
3,761,582	+				+1.6
3,761,620	+				-1.7
3,761,620	+				+0.8
3,761,621	-				+0.4
3,761,621	-				+1.2
3,761,621	-				+0.3
3,761,639	+				+0.3
3,761,639	+				+0.4
3,761,639	+				-0.9
3,761,640	-				+2.2
3,761,640	-				+0.1
3,761,640	-				+0.9
3,761,640	-				+0.2
3,761,640	-				-0.4
3,761,670	+				-0.8
3,761,687	+				+0.3
3,761,687	+				-0.1
3,761,687	+				+0.6
3,761,687	+				+0.3
3,761,687	+				+0.4
3,761,687	+				-0.7
3,761,687	+				-1.2
3,761,687	+				+0.9
3,761,687	+				+1.2
3,761,687	+				-0.7
3,761,687	+				-0.1
3,761,687	+				-0.7
3,761,688	-				-0.7
3,761,688	-				+1.1
3,761,688	-				-0.0
3,761,688	-				-0.5
3,761,688	-				-0.0
3,761,696	+		DZA65_RS17465	0.11	-0.4
3,761,696	+		DZA65_RS17465	0.11	+0.9
3,761,697	-		DZA65_RS17465	0.11	-0.2
3,761,732	+		DZA65_RS17465	0.18	+0.8
3,761,849	+		DZA65_RS17465	0.40	-1.3
3,761,849	+		DZA65_RS17465	0.40	-0.2
3,761,849	+		DZA65_RS17465	0.40	+0.6
3,761,849	+		DZA65_RS17465	0.40	-0.4
3,761,849	+		DZA65_RS17465	0.40	-0.4
3,761,849	+		DZA65_RS17465	0.40	-1.0
3,761,849	+		DZA65_RS17465	0.40	+0.8
3,761,849	+		DZA65_RS17465	0.40	+0.2
3,761,849	+		DZA65_RS17465	0.40	+0.3
3,761,849	+		DZA65_RS17465	0.40	+0.6
3,761,849	+		DZA65_RS17465	0.40	-0.2
3,761,849	+		DZA65_RS17465	0.40	+2.1
3,761,849	+		DZA65_RS17465	0.40	-2.0
3,761,849	+		DZA65_RS17465	0.40	-0.2
3,761,849	+		DZA65_RS17465	0.40	+0.9
3,761,849	+		DZA65_RS17465	0.40	+0.4
3,761,849	+		DZA65_RS17465	0.40	-1.4
3,761,850	-		DZA65_RS17465	0.40	-0.7
3,761,850	-		DZA65_RS17465	0.40	-1.2
3,761,850	-		DZA65_RS17465	0.40	-1.2
3,761,850	-		DZA65_RS17465	0.40	-0.5
3,761,850	-		DZA65_RS17465	0.40	+1.2
3,761,850	-		DZA65_RS17465	0.40	-1.2
3,761,850	-		DZA65_RS17465	0.40	+0.9
3,761,850	-		DZA65_RS17465	0.40	-1.2
3,761,850	-		DZA65_RS17465	0.40	+0.2
3,761,850	-		DZA65_RS17465	0.40	+0.9
3,761,850	-		DZA65_RS17465	0.40	-0.1
3,761,850	-		DZA65_RS17465	0.40	-0.8
3,761,894	+		DZA65_RS17465	0.48	-0.3
3,762,037	-		DZA65_RS17465	0.75	-0.4
3,762,060	+		DZA65_RS17465	0.79	+0.4
3,762,101	+		DZA65_RS17465	0.87	-0.4
3,762,101	+		DZA65_RS17465	0.87	-0.7
3,762,101	+		DZA65_RS17465	0.87	+1.6
3,762,101	+		DZA65_RS17465	0.87	+1.2
3,762,102	-		DZA65_RS17465	0.87	-0.2
3,762,102	-		DZA65_RS17465	0.87	-2.6
3,762,102	-		DZA65_RS17465	0.87	+1.4
3,762,109	+		DZA65_RS17465	0.88	+0.2
3,762,109	+		DZA65_RS17465	0.88	-0.5
3,762,110	-		DZA65_RS17465	0.88	-1.0
3,762,158	+				+2.0
3,762,158	+				+0.3
3,762,158	+				-0.2
3,762,158	+				-2.2
3,762,159	-				-1.7
3,762,187	+				+0.3
3,762,187	+				-1.4
3,762,188	-				-0.0
3,762,188	-				-0.2
3,762,188	-				-0.1
3,762,195	+				+2.0
3,762,195	+				+0.1
3,762,195	+				-0.7
3,762,196	-				-0.0
3,762,204	+				+0.2
3,762,204	+				-0.9
3,762,204	+				+0.1
3,762,204	+				+0.0
3,762,205	-				-1.4
3,762,205	-				-2.2
3,762,210	+				-0.2
3,762,210	+				+0.0
3,762,210	+				-1.0
3,762,211	-				+0.6
3,762,211	-				-0.5
3,762,211	-				+1.3
3,762,212	+				+2.4
3,762,212	+				+0.6
3,762,212	+				-1.7
3,762,213	-				-1.5
3,762,213	-				-0.9
3,762,213	-				+0.9
3,762,213	-				-0.7
3,762,213	-				-0.7
3,762,213	-				-1.7
3,762,229	-				+0.8
3,762,242	+				+1.3
3,762,242	+				-0.2
3,762,242	+				-0.6
3,762,243	-				-0.3
3,762,243	-				-3.7
3,762,243	-				-0.0
3,762,243	-				+0.4
3,762,243	-				-0.1
3,762,243	-				-0.8
3,762,247	+				+0.8
3,762,247	+				-1.7
3,762,247	+				+0.6
3,762,248	-				+0.6
3,762,248	-				-0.7
3,762,248	-				+1.6
3,762,248	-				-0.1
3,762,248	-				-1.4
3,762,248	-				-2.9
3,762,253	+				+0.2
3,762,253	+				-1.4
3,762,254	-				-2.2
3,762,254	-				+0.4
3,762,254	-				-1.2
3,762,310	+				+0.5
3,762,311	-				+0.4
3,762,329	+				+0.1
3,762,329	+				-0.0
3,762,330	-				-1.5
3,762,354	-				+0.4
3,762,354	-				+0.3
3,762,354	-				-0.5
3,762,387	-				+1.0
3,762,387	-				+0.7
3,762,400	+				-0.0
3,762,400	+				-0.0
3,762,400	+				+0.5
3,762,401	-				-0.7
3,762,401	-				+0.6
3,762,401	-				+0.1
3,762,401	-				+2.9
3,762,401	-				+0.7
3,762,401	-				+0.6
3,762,402	+				-2.4
3,762,402	+				-1.6
3,762,402	+				-0.2
3,762,402	+				-0.6
3,762,402	+				-0.2
3,762,402	+				-0.3
3,762,402	+				-0.7
3,762,403	-				-0.0
3,762,403	-				-2.6
3,762,403	-				+1.4
3,762,441	+				+0.3
3,762,441	+				+0.2
3,762,441	+				-0.4
3,762,441	+				-1.0
3,762,441	+				+0.6
3,762,441	+				-1.6
3,762,441	+				+0.7
3,762,442	-				-1.2
3,762,442	-				-0.0
3,762,442	-				-0.4
3,762,442	-				-1.6
3,762,462	-				-0.2
3,762,481	+				+0.4
3,762,481	+				+0.6
3,762,482	-				+0.6
3,762,482	-				-1.4
3,762,582	+		DZA65_RS17470	0.10	-1.1
3,762,582	+		DZA65_RS17470	0.10	+0.4
3,762,607	+		DZA65_RS17470	0.14	-1.6
3,762,607	+		DZA65_RS17470	0.14	-0.0
3,762,607	+		DZA65_RS17470	0.14	-0.1
3,762,607	+		DZA65_RS17470	0.14	-0.3
3,762,607	+		DZA65_RS17470	0.14	-1.2
3,762,607	+		DZA65_RS17470	0.14	+0.8
3,762,607	+		DZA65_RS17470	0.14	-0.7
3,762,607	+		DZA65_RS17470	0.14	+0.4
3,762,607	+		DZA65_RS17470	0.14	-0.5
3,762,607	+		DZA65_RS17470	0.14	-2.4
3,762,608	-		DZA65_RS17470	0.14	+0.7
3,762,608	-		DZA65_RS17470	0.14	-0.2
3,762,608	-		DZA65_RS17470	0.14	+1.3
3,762,608	-		DZA65_RS17470	0.14	-0.4
3,762,608	-		DZA65_RS17470	0.14	+0.7
3,762,644	-		DZA65_RS17470	0.20	-0.4
3,762,718	+		DZA65_RS17470	0.31	-1.7
3,762,718	+		DZA65_RS17470	0.31	-0.5
3,762,718	+		DZA65_RS17470	0.31	+0.6
3,762,719	-		DZA65_RS17470	0.31	-1.2
3,762,719	-		DZA65_RS17470	0.31	-0.4
3,762,721	+		DZA65_RS17470	0.31	-0.9
3,762,721	+		DZA65_RS17470	0.31	-0.5
3,762,721	+		DZA65_RS17470	0.31	-0.2
3,762,722	-		DZA65_RS17470	0.31	+0.9
3,762,824	+		DZA65_RS17470	0.47	+3.5
3,762,883	+		DZA65_RS17470	0.56	-0.6
3,762,883	+		DZA65_RS17470	0.56	+0.6
3,762,883	+		DZA65_RS17470	0.56	+1.1
3,762,883	+		DZA65_RS17470	0.56	-1.0
3,762,884	-		DZA65_RS17470	0.56	-1.7
3,762,884	-		DZA65_RS17470	0.56	-0.4
3,762,884	-		DZA65_RS17470	0.56	-1.1
3,762,884	-		DZA65_RS17470	0.56	-0.8
3,762,884	-		DZA65_RS17470	0.56	-0.1
3,762,884	-		DZA65_RS17470	0.56	-2.7
3,762,886	-		DZA65_RS17470	0.57	-0.0
3,762,890	+		DZA65_RS17470	0.57	+0.2
3,762,890	+		DZA65_RS17470	0.57	-0.2
3,762,890	+		DZA65_RS17470	0.57	-0.2
3,762,890	+		DZA65_RS17470	0.57	+0.6
3,762,890	+		DZA65_RS17470	0.57	+0.4
3,762,890	+		DZA65_RS17470	0.57	+0.4
3,762,890	+		DZA65_RS17470	0.57	-0.0
3,762,890	+		DZA65_RS17470	0.57	-1.3
3,762,890	+		DZA65_RS17470	0.57	-1.7
3,762,890	+		DZA65_RS17470	0.57	-0.0
3,762,890	+		DZA65_RS17470	0.57	-1.7
3,762,890	+		DZA65_RS17470	0.57	+0.8
3,762,891	-		DZA65_RS17470	0.57	+0.1
3,762,891	-		DZA65_RS17470	0.57	-0.4
3,762,891	-		DZA65_RS17470	0.57	-1.1
3,762,891	-		DZA65_RS17470	0.57	-0.4
3,762,891	-		DZA65_RS17470	0.57	-0.4
3,762,891	-		DZA65_RS17470	0.57	-1.2
3,762,891	-		DZA65_RS17470	0.57	+0.3
3,762,891	-		DZA65_RS17470	0.57	-2.4
3,762,891	-		DZA65_RS17470	0.57	-1.0
3,762,891	-		DZA65_RS17470	0.57	-0.0
3,762,891	-		DZA65_RS17470	0.57	+0.6
3,762,891	-		DZA65_RS17470	0.57	-0.7
3,762,894	+		DZA65_RS17470	0.58	-2.0
3,762,895	-		DZA65_RS17470	0.58	+0.1
3,762,895	-		DZA65_RS17470	0.58	+0.2
3,762,895	-		DZA65_RS17470	0.58	-1.4
3,762,967	+		DZA65_RS17470	0.69	-0.3
3,762,967	+		DZA65_RS17470	0.69	-1.2
3,762,967	+		DZA65_RS17470	0.69	+0.4
3,762,967	+		DZA65_RS17470	0.69	-0.4
3,762,967	+		DZA65_RS17470	0.69	-0.1
3,762,967	+		DZA65_RS17470	0.69	+0.3
3,762,967	+		DZA65_RS17470	0.69	-0.9
3,762,967	+		DZA65_RS17470	0.69	-0.7
3,762,967	+		DZA65_RS17470	0.69	-0.0
3,762,968	-		DZA65_RS17470	0.69	-0.0
3,762,968	-		DZA65_RS17470	0.69	-0.4
3,762,968	-		DZA65_RS17470	0.69	-1.2
3,762,968	-		DZA65_RS17470	0.69	-0.4
3,762,968	-		DZA65_RS17470	0.69	+1.2
3,762,968	-		DZA65_RS17470	0.69	-0.2
3,763,038	+		DZA65_RS17470	0.80	-0.3
3,763,038	+		DZA65_RS17470	0.80	+0.9
3,763,038	+		DZA65_RS17470	0.80	+0.4
3,763,038	+		DZA65_RS17470	0.80	-1.5
3,763,038	+		DZA65_RS17470	0.80	+0.2
3,763,039	-		DZA65_RS17470	0.80	+1.2
3,763,039	-		DZA65_RS17470	0.80	+0.8
3,763,039	-		DZA65_RS17470	0.80	+0.2
3,763,039	-		DZA65_RS17470	0.80	+0.6
3,763,039	-		DZA65_RS17470	0.80	-0.1
3,763,039	-		DZA65_RS17470	0.80	-0.2
3,763,108	+				-0.4
3,763,108	+				+0.6
3,763,108	+				+0.4
3,763,108	+				-0.2
3,763,108	+				+0.4
3,763,108	+				-0.3
3,763,108	+				+1.3
3,763,108	+				+0.4
3,763,109	-				+0.5
3,763,109	-				-0.6
3,763,109	-				-1.2
3,763,109	-				-0.5
3,763,109	-				-0.4
3,763,162	+				+2.4
3,763,162	+				-2.4
3,763,162	+				+0.9
3,763,162	+				-0.8
3,763,162	+				+0.6
3,763,163	-				+0.7
3,763,163	-				+0.9
3,763,163	-				-1.1
3,763,163	-				-0.4
3,763,163	-				+0.7
3,763,183	+				-1.0
3,763,184	-				-1.6
3,763,184	-				-0.4
3,763,240	+				-0.7
3,763,240	+				-1.4
3,763,240	+				-1.2
3,763,240	+				+1.1
3,763,241	-				-2.0
3,763,241	-				-0.6
3,763,241	-				-0.8
3,763,241	-				+1.4
3,763,241	-				-0.2
3,763,241	-				-1.4
3,763,341	+				+0.6
3,763,342	-				+1.3
3,763,351	+				+1.3
3,763,351	+				-0.4
3,763,365	+				-0.1
3,763,366	-				-2.7
3,763,366	-				-0.0
3,763,366	-				-1.7
3,763,374	+				-2.4
3,763,374	+				+0.0
3,763,378	+				-0.1
3,763,379	-				-0.8
3,763,388	-				+0.7
3,763,423	+				+0.6
3,763,423	+				-0.2
3,763,423	+				-0.2
3,763,424	-				+0.9
3,763,437	+				+0.6
3,763,437	+				+0.4
3,763,440	+				-0.7
3,763,441	-				-0.8
3,763,441	-				-0.4
3,763,442	+				+1.6
3,763,443	-				-0.1
3,763,443	-				-0.1
3,763,487	+				+0.9
3,763,487	+				-0.2
3,763,487	+				+2.2
3,763,488	-				-0.1
3,763,620	+		DZA65_RS17475	0.13	+0.3
3,763,620	+		DZA65_RS17475	0.13	-0.2
3,763,620	+		DZA65_RS17475	0.13	-1.2
3,763,620	+		DZA65_RS17475	0.13	+0.7
3,763,620	+		DZA65_RS17475	0.13	-0.4
3,763,620	+		DZA65_RS17475	0.13	-0.7
3,763,620	+		DZA65_RS17475	0.13	-0.4
3,763,620	+		DZA65_RS17475	0.13	+0.8
3,763,620	+		DZA65_RS17475	0.13	-0.2
3,763,621	-		DZA65_RS17475	0.13	-2.0
3,763,621	-		DZA65_RS17475	0.13	-0.4
3,763,621	-		DZA65_RS17475	0.13	+0.2
3,763,622	+		DZA65_RS17475	0.13	+0.3
3,763,622	+		DZA65_RS17475	0.13	-0.4
3,763,622	+		DZA65_RS17475	0.13	-1.7
3,763,623	-		DZA65_RS17475	0.14	-1.0
3,763,623	-		DZA65_RS17475	0.14	+1.5
3,763,623	-		DZA65_RS17475	0.14	+0.3
3,763,623	-		DZA65_RS17475	0.14	-0.1
3,763,689	-		DZA65_RS17475	0.22	+1.0
3,763,811	+		DZA65_RS17475	0.38	+0.3
3,763,811	+		DZA65_RS17475	0.38	+0.3
3,763,811	+		DZA65_RS17475	0.38	+0.1
3,763,811	+		DZA65_RS17475	0.38	-0.6
3,763,811	+		DZA65_RS17475	0.38	-1.2
3,763,811	+		DZA65_RS17475	0.38	-0.6
3,763,811	+		DZA65_RS17475	0.38	-1.9
3,763,811	+		DZA65_RS17475	0.38	-2.2
3,763,812	-		DZA65_RS17475	0.38	-0.8
3,763,812	-		DZA65_RS17475	0.38	-0.1
3,763,812	-		DZA65_RS17475	0.38	+1.1
3,763,839	+		DZA65_RS17475	0.41	+0.6
3,763,840	-		DZA65_RS17475	0.42	-0.2
3,763,840	-		DZA65_RS17475	0.42	+1.2
3,763,840	-		DZA65_RS17475	0.42	-0.2
3,763,840	-		DZA65_RS17475	0.42	+0.8
3,763,840	-		DZA65_RS17475	0.42	-0.2
3,763,852	+		DZA65_RS17475	0.43	+0.6
3,763,852	+		DZA65_RS17475	0.43	+0.2
3,763,852	+		DZA65_RS17475	0.43	+0.8
3,763,852	+		DZA65_RS17475	0.43	-0.0
3,763,895	+		DZA65_RS17475	0.49	-0.4
3,763,921	+		DZA65_RS17475	0.52	+0.7
3,763,921	+		DZA65_RS17475	0.52	+0.7
3,763,921	+		DZA65_RS17475	0.52	+0.9
3,763,922	-		DZA65_RS17475	0.52	-1.0
3,763,922	-		DZA65_RS17475	0.52	+0.6
3,763,922	-		DZA65_RS17475	0.52	+0.6
3,763,974	+		DZA65_RS17475	0.59	-1.1
3,763,974	+		DZA65_RS17475	0.59	+1.7
3,763,974	+		DZA65_RS17475	0.59	-0.4
3,764,058	+		DZA65_RS17475	0.70	+0.7
3,764,059	-		DZA65_RS17475	0.70	-0.5