Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12925

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,771,532	+		DZA65_RS12920	0.59	-0.8
2,771,533	-		DZA65_RS12920	0.59	-1.5
2,771,533	-		DZA65_RS12920	0.59	-0.3
2,771,533	-		DZA65_RS12920	0.59	+0.5
2,771,676	+		DZA65_RS12920	0.70	-0.8
2,771,676	+		DZA65_RS12920	0.70	+0.9
2,771,676	+		DZA65_RS12920	0.70	+0.6
2,771,676	+		DZA65_RS12920	0.70	+1.1
2,771,676	+		DZA65_RS12920	0.70	+0.1
2,771,676	+		DZA65_RS12920	0.70	+0.9
2,771,676	+		DZA65_RS12920	0.70	+0.2
2,771,676	+		DZA65_RS12920	0.70	-2.4
2,771,676	+		DZA65_RS12920	0.70	-1.3
2,771,676	+		DZA65_RS12920	0.70	-1.8
2,771,677	-		DZA65_RS12920	0.70	+0.7
2,771,677	-		DZA65_RS12920	0.70	-0.1
2,771,677	-		DZA65_RS12920	0.70	-0.3
2,771,677	-		DZA65_RS12920	0.70	+0.6
2,771,680	+		DZA65_RS12920	0.70	+0.5
2,771,681	-		DZA65_RS12920	0.70	-1.8
2,771,700	-		DZA65_RS12920	0.72	+0.5
2,771,700	-		DZA65_RS12920	0.72	+2.2
2,771,787	+		DZA65_RS12920	0.78	-0.2
2,771,973	+				+0.4
2,771,973	+				-0.8
2,771,973	+				+0.5
2,771,973	+				-0.2
2,771,973	+				-1.1
2,771,974	-				-0.2
2,771,974	-				+1.0
2,771,974	-				-0.8
2,771,995	-				+0.2
2,772,028	+				-0.7
2,772,028	+				-0.8
2,772,028	+				+1.0
2,772,029	-				-0.4
2,772,029	-				+1.1
2,772,029	-				+2.4
2,772,029	-				+0.7
2,772,029	-				-0.6
2,772,029	-				-1.6
2,772,029	-				-1.1
2,772,032	-				-1.6
2,772,032	-				+0.1
2,772,032	-				+1.4
2,772,032	-				-1.8
2,772,032	-				-1.4
2,772,032	-				-0.7
2,772,115	-				-0.4
2,772,115	-				+0.4
2,772,128	-				+1.2
2,772,146	-				+0.4
2,772,154	+				-0.5
2,772,154	+				+1.4
2,772,154	+				+0.2
2,772,154	+				-0.0
2,772,154	+				-0.1
2,772,154	+				-0.7
2,772,155	-				-2.0
2,772,155	-				-0.7
2,772,191	+				-0.4
2,772,233	+				-0.0
2,772,237	-				+0.7
2,772,252	+				-0.8
2,772,252	+				-1.2
2,772,252	+				+0.2
2,772,252	+				-0.4
2,772,253	-				+0.2
2,772,284	+				-2.8
2,772,284	+				-0.8
2,772,287	+				-0.4
2,772,287	+				+1.6
2,772,288	-				-0.8
2,772,363	+				-0.8
2,772,364	-				+0.5
2,772,371	+				-1.9
2,772,375	+				-0.3
2,772,375	+				-0.2
2,772,376	-				+0.5
2,772,376	-				-0.4
2,772,380	+				+0.2
2,772,380	+				-3.1
2,772,380	+				-0.5
2,772,381	-				-0.8
2,772,381	-				-1.7
2,772,381	-				+1.2
2,772,387	+				+1.2
2,772,387	+				+0.2
2,772,387	+				-0.4
2,772,388	-				-0.5
2,772,388	-				+1.2
2,772,388	-				+1.1
2,772,401	+				-0.8
2,772,401	+				+1.1
2,772,401	+				+0.0
2,772,401	+				-0.7
2,772,402	-				-0.3
2,772,420	+				+0.2
2,772,421	-				-0.4
2,772,421	-				-1.0
2,772,421	-				+0.2
2,772,542	-		DZA65_RS12925	0.12	-1.2
2,772,714	+		DZA65_RS12925	0.28	-1.0
2,772,714	+		DZA65_RS12925	0.28	+0.1
2,772,714	+		DZA65_RS12925	0.28	-1.4
2,772,732	+		DZA65_RS12925	0.30	+0.5
2,772,732	+		DZA65_RS12925	0.30	+0.9
2,772,733	-		DZA65_RS12925	0.30	-0.4
2,772,733	-		DZA65_RS12925	0.30	-1.0
2,772,733	-		DZA65_RS12925	0.30	+0.3
2,772,733	-		DZA65_RS12925	0.30	+0.4
2,772,745	+		DZA65_RS12925	0.31	-1.0
2,772,745	+		DZA65_RS12925	0.31	-1.2
2,772,746	-		DZA65_RS12925	0.31	-0.0
2,772,746	-		DZA65_RS12925	0.31	-2.1
2,772,761	+		DZA65_RS12925	0.32	+0.3
2,772,761	+		DZA65_RS12925	0.32	-0.8
2,772,761	+		DZA65_RS12925	0.32	+0.8
2,772,766	+		DZA65_RS12925	0.33	-0.0
2,772,767	-		DZA65_RS12925	0.33	-0.1
2,772,897	+		DZA65_RS12925	0.45	-0.5
2,772,897	+				-1.4
2,772,897	+		DZA65_RS12925	0.45	-1.8
2,772,898	-		DZA65_RS12925	0.45	-1.8
2,772,898	-		DZA65_RS12925	0.45	+0.4
2,772,898	-		DZA65_RS12925	0.45	-1.2
2,772,898	-		DZA65_RS12925	0.45	-0.8
2,772,899	+		DZA65_RS12925	0.45	-0.2
2,772,900	-		DZA65_RS12925	0.46	-1.4
2,773,044	-		DZA65_RS12925	0.59	-1.1
2,773,090	-		DZA65_RS12925	0.64	-2.8
2,773,197	+		DZA65_RS12925	0.74	-0.2
2,773,197	+		DZA65_RS12925	0.74	-0.6
2,773,197	+		DZA65_RS12925	0.74	-1.1
2,773,198	-		DZA65_RS12925	0.74	+0.4
2,773,198	-		DZA65_RS12925	0.74	-0.6
2,773,229	-		DZA65_RS12925	0.77	+0.2
2,773,427	+				-0.2
2,773,428	-				+0.2
2,773,482	+				+0.1
2,773,483	-				+0.3
2,773,483	-				+1.6
2,773,483	-				-0.7
2,773,522	-				-0.5
2,773,807	+		DZA65_RS12930	0.24	-0.8
2,773,808	-		DZA65_RS12930	0.24	+1.0
2,773,825	-		DZA65_RS12930	0.25	+0.0
2,773,845	+		DZA65_RS12930	0.26	-0.8
2,773,846	-		DZA65_RS12930	0.26	-0.0
2,773,846	-		DZA65_RS12930	0.26	-1.6
2,774,054	+		DZA65_RS12930	0.41	-0.5
2,774,081	+		DZA65_RS12930	0.43	+0.4
2,774,081	+		DZA65_RS12930	0.43	+0.5
2,774,081	+		DZA65_RS12930	0.43	-0.1
2,774,081	+				+2.5
2,774,082	-		DZA65_RS12930	0.43	-1.6
2,774,082	-		DZA65_RS12930	0.43	+0.0
2,774,082	-		DZA65_RS12930	0.43	+0.7
2,774,084	+		DZA65_RS12930	0.43	-2.0
2,774,084	+		DZA65_RS12930	0.43	-0.4
2,774,085	-		DZA65_RS12930	0.43	-0.1
2,774,085	-		DZA65_RS12930	0.43	-0.4
2,774,085	-		DZA65_RS12930	0.43	-0.0
2,774,274	-		DZA65_RS12930	0.57	+0.7
2,774,282	+		DZA65_RS12930	0.57	-0.6
2,774,283	-		DZA65_RS12930	0.57	+2.0
2,774,394	+		DZA65_RS12930	0.65	-0.5
2,774,395	-		DZA65_RS12930	0.65	+0.2
2,774,395	-		DZA65_RS12930	0.65	-0.9
2,774,424	-		DZA65_RS12930	0.67	-3.2
2,774,469	-		DZA65_RS12930	0.70	+0.5