Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11575

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,470,830	+		DZA65_RS11565	0.78	-0.3
2,470,856	+		DZA65_RS11565	0.83	+0.3
2,470,870	+		DZA65_RS11565	0.86	-0.4
2,470,871	-		DZA65_RS11565	0.86	-1.2
2,470,871	-		DZA65_RS11565	0.86	+1.0
2,470,984	+				-1.9
2,470,984	+				-0.3
2,470,985	-				-0.9
2,471,015	-				+0.9
2,471,051	+				-0.1
2,471,074	+				-0.9
2,471,074	+				-0.9
2,471,075	-				+0.7
2,471,081	+				-0.4
2,471,093	+				+0.9
2,471,094	-				-0.3
2,471,099	-				-0.1
2,471,111	-				-1.2
2,471,164	+		DZA65_RS11570	0.10	-0.7
2,471,164	+		DZA65_RS11570	0.10	-1.3
2,471,164	+		DZA65_RS11570	0.10	-0.7
2,471,230	-		DZA65_RS11570	0.25	+0.7
2,471,278	+		DZA65_RS11570	0.36	-3.2
2,471,279	-		DZA65_RS11570	0.36	-0.4
2,471,338	+		DZA65_RS11570	0.49	-0.2
2,471,360	+		DZA65_RS11570	0.54	-0.2
2,471,360	+		DZA65_RS11570	0.54	+0.5
2,471,378	+		DZA65_RS11570	0.58	-0.5
2,471,378	+		DZA65_RS11570	0.58	-0.2
2,471,378	+		DZA65_RS11570	0.58	-0.7
2,471,378	+		DZA65_RS11570	0.58	-0.1
2,471,378	+		DZA65_RS11570	0.58	+0.1
2,471,378	+		DZA65_RS11570	0.58	-1.4
2,471,378	+		DZA65_RS11570	0.58	+0.0
2,471,378	+		DZA65_RS11570	0.58	+0.1
2,471,378	+		DZA65_RS11570	0.58	-0.6
2,471,378	+		DZA65_RS11570	0.58	-1.1
2,471,379	-		DZA65_RS11570	0.58	+0.4
2,471,379	-		DZA65_RS11570	0.58	-0.2
2,471,379	-		DZA65_RS11570	0.58	+0.3
2,471,379	-		DZA65_RS11570	0.58	+0.5
2,471,382	+		DZA65_RS11570	0.59	-0.6
2,471,382	+		DZA65_RS11570	0.59	-0.1
2,471,383	-		DZA65_RS11570	0.59	-2.1
2,471,383	-		DZA65_RS11570	0.59	+0.6
2,471,416	-				-0.4
2,471,416	-		DZA65_RS11570	0.66	-0.3
2,471,416	-		DZA65_RS11570	0.66	-0.2
2,471,416	-		DZA65_RS11570	0.66	+0.7
2,471,430	+		DZA65_RS11570	0.70	+0.7
2,471,430	+		DZA65_RS11570	0.70	+2.0
2,471,431	-		DZA65_RS11570	0.70	+0.1
2,471,435	+		DZA65_RS11570	0.71	-0.0
2,471,435	+		DZA65_RS11570	0.71	+0.1
2,471,436	-		DZA65_RS11570	0.71	+3.3
2,471,565	+				-0.3
2,471,565	+				+0.9
2,471,566	-				-0.0
2,471,566	-				+1.5
2,471,566	-				-0.5
2,471,584	-				-0.1
2,471,586	+				-1.7
2,471,586	+				+1.0
2,471,587	-				+1.0
2,471,607	+				+0.1
2,471,607	+				-0.1
2,471,608	-				+0.1
2,471,608	-				+0.4
2,471,612	+				+1.1
2,471,612	+				-0.3
2,471,613	-				+0.0
2,471,613	-				-1.2
2,471,667	+				+0.5
2,471,667	+				+0.9
2,471,667	+				+0.1
2,471,667	+				-1.0
2,471,668	-				+0.3
2,471,708	+				-1.4
2,471,806	+		DZA65_RS11575	0.21	-1.7
2,471,806	+		DZA65_RS11575	0.21	+0.6
2,471,806	+		DZA65_RS11575	0.21	-0.0
2,471,806	+		DZA65_RS11575	0.21	+0.1
2,471,807	-		DZA65_RS11575	0.21	-0.6
2,471,807	-		DZA65_RS11575	0.21	-0.3
2,471,807	-		DZA65_RS11575	0.21	-2.2
2,471,807	-		DZA65_RS11575	0.21	+0.0
2,471,909	+		DZA65_RS11575	0.36	-0.9
2,472,006	+		DZA65_RS11575	0.51	+0.1
2,472,143	+		DZA65_RS11575	0.72	-0.6
2,472,250	+		DZA65_RS11575	0.88	-0.7
2,472,250	+		DZA65_RS11575	0.88	-1.9
2,472,294	+				+0.2
2,472,322	+				-0.7
2,472,322	+				-2.4
2,472,322	+				+1.0
2,472,322	+				+1.1
2,472,322	+				+1.2
2,472,322	+				+0.1
2,472,322	+				-0.0
2,472,322	+				+1.1
2,472,322	+				+0.3
2,472,322	+				-0.3
2,472,322	+				-1.1
2,472,322	+				-0.9
2,472,322	+				+0.3
2,472,323	-				+0.9
2,472,323	-				-0.2
2,472,323	-				+3.1
2,472,323	-				+0.1
2,472,323	-				-0.3
2,472,323	-				-0.2
2,472,328	+				-0.7
2,472,328	+				-0.9
2,472,328	+				-0.3
2,472,328	+				+0.5
2,472,328	+				-0.7
2,472,328	+				-0.2
2,472,328	+				-0.9
2,472,329	-				-0.0
2,472,329	-				-1.1
2,472,329	-				-0.2
2,472,329	-				+0.1
2,472,329	-				+0.3
2,472,329	-				-2.2
2,472,442	-				+0.1
2,472,452	+				+0.5
2,472,453	-				-1.0
2,472,453	-				-0.5
2,472,457	+				-0.7
2,472,491	+				-0.1
2,472,538	+				-1.2
2,472,539	-				+1.1
2,472,543	-				+0.8
2,472,558	+				-0.2
2,472,558	+				-1.7
2,472,558	+				-1.0
2,472,560	+				+0.5
2,472,561	-				+1.0
2,472,589	+				+0.7
2,472,590	-				-1.4
2,472,590	-				+2.1
2,472,590	-				+0.1
2,472,639	-				+0.0
2,472,681	+				-0.1
2,472,685	+				-0.6
2,472,686	-				+0.1
2,472,702	-				-0.1
2,472,712	-				+0.1
2,472,722	+				+0.1
2,472,722	+				+0.9
2,472,722	+				+0.1
2,472,723	-				+0.6
2,472,770	+				-0.3
2,472,770	+				-0.5
2,472,770	+				-0.7
2,472,771	-				+0.0
2,472,778	+				-0.1
2,472,779	-				-0.2
2,472,825	+				-0.0
2,472,829	+				+0.5
2,472,829	+				+0.0
2,472,830	-				-0.0
2,472,836	+				+0.6
2,472,836	+				+0.6
2,472,837	-				-0.5
2,472,837	-				+0.6
2,472,837	-				-2.4
2,472,837	-				-0.1
2,472,971	+		DZA65_RS11580	0.53	-0.3
2,472,972	-		DZA65_RS11580	0.54	+0.8
2,472,972	-		DZA65_RS11580	0.54	+0.1
2,473,050	+		DZA65_RS11580	0.82	+1.7
2,473,050	+		DZA65_RS11580	0.82	+0.6
2,473,051	-		DZA65_RS11580	0.82	-0.2
2,473,056	+		DZA65_RS11580	0.84	-1.9
2,473,056	+		DZA65_RS11580	0.84	-0.3
2,473,056	+		DZA65_RS11580	0.84	-0.4
2,473,056	+		DZA65_RS11580	0.84	+0.2
2,473,056	+		DZA65_RS11580	0.84	+0.1
2,473,057	-		DZA65_RS11580	0.84	-0.9
2,473,057	-		DZA65_RS11580	0.84	+1.4
2,473,057	-		DZA65_RS11580	0.84	-0.3
2,473,057	-		DZA65_RS11580	0.84	+0.7
2,473,095	+				+0.9
2,473,095	+				+0.7
2,473,096	-				-0.2
2,473,096	-				+0.7
2,473,096	-				-0.1
2,473,096	-				+0.1
2,473,096	-				+1.3
2,473,096	-				+0.9
2,473,096	-				-0.6
2,473,096	-				-0.1
2,473,138	+				-1.1
2,473,152	+				-0.0
2,473,152	+				+1.0
2,473,152	+				+1.1
2,473,152	+				-3.3
2,473,153	-				-1.4
2,473,153	-				+1.5
2,473,153	-				-2.4
2,473,153	-				-0.1
2,473,153	-				+0.8
2,473,153	-				+0.7
2,473,153	-				+0.1
2,473,154	+				+0.7
2,473,154	+				+0.8
2,473,154	+				+0.8
2,473,155	-				-0.7
2,473,155	-				-0.3
2,473,155	-				+0.1
2,473,155	-				+0.3
2,473,155	-				-0.1
2,473,179	-				-0.9
2,473,179	-				-0.7
2,473,188	+				-1.4
2,473,189	-				-1.1
2,473,189	-				-1.4
2,473,195	+				-0.7
2,473,208	+				-0.4
2,473,209	-				-0.3
2,473,209	-				+0.1
2,473,274	+				-0.2
2,473,274	+				-0.5
2,473,274	+				-0.1
2,473,274	+				+2.8
2,473,274	+				-0.3
2,473,275	-				+0.6
2,473,316	+				-1.4