Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08245

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,731,928	+				+0.5
1,731,929	-		DZA65_RS08240	0.10	+0.6
1,731,929	-		DZA65_RS08240	0.10	-1.2
1,731,967	+		DZA65_RS08240	0.14	+0.4
1,732,028	+		DZA65_RS08240	0.19	-2.5
1,732,162	+				+0.3
1,732,162	+		DZA65_RS08240	0.32	+0.9
1,732,172	+		DZA65_RS08240	0.33	-2.0
1,732,172	+		DZA65_RS08240	0.33	-0.7
1,732,172	+		DZA65_RS08240	0.33	-0.8
1,732,172	+		DZA65_RS08240	0.33	+4.2
1,732,173	-		DZA65_RS08240	0.33	+0.5
1,732,249	+		DZA65_RS08240	0.40	+0.8
1,732,249	+		DZA65_RS08240	0.40	-2.3
1,732,249	+		DZA65_RS08240	0.40	-0.9
1,732,249	+		DZA65_RS08240	0.40	-1.0
1,732,250	-		DZA65_RS08240	0.40	+0.3
1,732,250	-		DZA65_RS08240	0.40	+0.1
1,732,250	-		DZA65_RS08240	0.40	-0.1
1,732,295	+		DZA65_RS08240	0.44	-0.1
1,732,317	+		DZA65_RS08240	0.46	-2.7
1,732,317	+		DZA65_RS08240	0.46	-0.3
1,732,317	+		DZA65_RS08240	0.46	-0.1
1,732,317	+		DZA65_RS08240	0.46	-1.5
1,732,317	+		DZA65_RS08240	0.46	-1.5
1,732,318	-		DZA65_RS08240	0.46	+0.1
1,732,318	-		DZA65_RS08240	0.46	-0.7
1,732,318	-		DZA65_RS08240	0.46	-1.3
1,732,318	-		DZA65_RS08240	0.46	+1.5
1,732,318	-		DZA65_RS08240	0.46	+1.4
1,732,318	-		DZA65_RS08240	0.46	-0.3
1,732,318	-		DZA65_RS08240	0.46	-0.7
1,732,318	-		DZA65_RS08240	0.46	+0.3
1,732,320	-		DZA65_RS08240	0.46	-0.3
1,732,438	+				-1.3
1,732,438	+		DZA65_RS08240	0.58	+0.6
1,732,439	-		DZA65_RS08240	0.58	-0.9
1,732,439	-		DZA65_RS08240	0.58	+0.9
1,732,448	-		DZA65_RS08240	0.58	-1.5
1,732,462	+		DZA65_RS08240	0.60	-2.8
1,732,462	+		DZA65_RS08240	0.60	+0.8
1,732,463	-		DZA65_RS08240	0.60	-0.1
1,732,601	-		DZA65_RS08240	0.73	+0.3
1,732,601	-		DZA65_RS08240	0.73	+0.3
1,732,676	-		DZA65_RS08240	0.80	+0.3
1,732,729	+		DZA65_RS08240	0.85	-0.3
1,732,729	+		DZA65_RS08240	0.85	-0.2
1,732,729	+		DZA65_RS08240	0.85	+0.0
1,732,730	-		DZA65_RS08240	0.85	-0.5
1,732,730	-		DZA65_RS08240	0.85	-2.7
1,732,730	-		DZA65_RS08240	0.85	+0.9
1,732,745	+		DZA65_RS08240	0.86	+0.3
1,732,746	-		DZA65_RS08240	0.86	+0.1
1,732,746	-		DZA65_RS08240	0.86	-0.9
1,732,746	-		DZA65_RS08240	0.86	+1.6
1,732,814	+				+0.1
1,732,814	+				-0.1
1,732,814	+				-0.4
1,732,814	+				+0.6
1,732,919	+				+0.1
1,732,919	+				+0.3
1,732,920	-				+0.3
1,732,934	+				-0.9
1,732,934	+				-0.2
1,732,934	+				-0.7
1,732,934	+				-0.7
1,732,935	-				-1.3
1,732,935	-				-0.3
1,732,935	-				-2.0
1,732,935	-				-0.3
1,732,935	-				-0.1
1,732,935	-				+1.6
1,732,935	-				+0.2
1,732,935	-				-0.5
1,732,937	+				+0.0
1,732,937	+				+0.3
1,732,937	+				+0.7
1,732,937	+				-0.9
1,732,937	+				+1.6
1,732,938	-				-2.0
1,732,938	-				-0.6
1,732,966	-				+1.6
1,732,993	+				+0.1
1,732,993	+				-0.1
1,732,993	+				+0.8
1,732,993	+				+0.0
1,732,994	-				+0.3
1,732,994	-				+0.5
1,733,000	+				-0.4
1,733,001	-				-0.7
1,733,001	-				+0.3
1,733,001	-				+0.4
1,733,114	-		DZA65_RS08245	0.20	-1.3
1,733,114	-		DZA65_RS08245	0.20	+2.9
1,733,150	+		DZA65_RS08245	0.23	+1.0
1,733,151	-		DZA65_RS08245	0.24	-1.4
1,733,189	+		DZA65_RS08245	0.27	-1.0
1,733,189	+		DZA65_RS08245	0.27	+0.0
1,733,190	-		DZA65_RS08245	0.27	+2.4
1,733,279	+		DZA65_RS08245	0.35	-0.9
1,733,387	+		DZA65_RS08245	0.45	-0.3
1,733,387	+		DZA65_RS08245	0.45	+1.2
1,733,392	+		DZA65_RS08245	0.46	+1.0
1,733,393	-		DZA65_RS08245	0.46	+0.3
1,733,393	-		DZA65_RS08245	0.46	+1.4
1,733,486	+		DZA65_RS08245	0.54	+0.5
1,733,486	+				+3.3
1,733,486	+		DZA65_RS08245	0.54	+1.7
1,733,487	-		DZA65_RS08245	0.54	-0.0
1,733,487	-		DZA65_RS08245	0.54	-0.1
1,733,487	-		DZA65_RS08245	0.54	-1.7
1,733,487	-		DZA65_RS08245	0.54	+0.1
1,733,487	-		DZA65_RS08245	0.54	+1.8
1,733,487	-		DZA65_RS08245	0.54	+0.3
1,733,487	-		DZA65_RS08245	0.54	-0.7
1,733,491	+		DZA65_RS08245	0.55	+1.7
1,733,491	+		DZA65_RS08245	0.55	-1.5
1,733,491	+		DZA65_RS08245	0.55	+0.3
1,733,491	+		DZA65_RS08245	0.55	+1.1
1,733,491	+		DZA65_RS08245	0.55	+0.9
1,733,492	-		DZA65_RS08245	0.55	-0.6
1,733,492	-		DZA65_RS08245	0.55	-0.1
1,733,492	-		DZA65_RS08245	0.55	-0.5
1,733,492	-		DZA65_RS08245	0.55	-0.2
1,733,537	+		DZA65_RS08245	0.59	-0.5
1,733,538	-		DZA65_RS08245	0.59	-1.0
1,733,538	-		DZA65_RS08245	0.59	+0.5
1,733,700	-		DZA65_RS08245	0.74	-0.7
1,733,739	+		DZA65_RS08245	0.77	+0.2
1,733,852	+		DZA65_RS08245	0.88	-0.6
1,733,885	+				-0.0
1,733,885	+				-1.2
1,733,885	+				-0.1
1,733,885	+				-2.0
1,733,885	+				+0.9
1,733,886	-				+0.1
1,733,976	+				-0.8
1,733,976	+				+0.0
1,733,976	+				-1.1
1,733,976	+				+0.8
1,733,976	+				+0.0
1,733,976	+				-1.0
1,733,976	+				+0.3
1,733,977	-				-0.5
1,733,977	-				-1.0
1,733,977	-				-0.5
1,733,977	-				-1.4
1,733,977	-				+0.2
1,733,977	-				-1.0
1,733,977	-				+0.9
1,733,977	-				-1.5
1,733,977	-				+0.3
1,734,036	+				+0.3
1,734,036	+				+1.0
1,734,036	+				-0.3
1,734,037	-				+0.0
1,734,037	-				+0.3
1,734,037	-				-0.4
1,734,037	-				-0.6
1,734,048	-				-1.8
1,734,048	-				+0.4
1,734,111	-				+0.2
1,734,111	-				+0.6
1,734,130	+				-0.5
1,734,130	+				-1.6
1,734,131	-				+1.4
1,734,131	-				+0.2
1,734,131	-				-0.6
1,734,221	-				+0.3
1,734,221	-				-0.4
1,734,221	-				+0.5
1,734,221	-				-0.6
1,734,285	-				-0.0
1,734,329	+		DZA65_RS08250	0.11	+0.3
1,734,329	+		DZA65_RS08250	0.11	+0.6
1,734,329	+		DZA65_RS08250	0.11	-0.3
1,734,329	+		DZA65_RS08250	0.11	-0.2
1,734,330	-				+1.9
1,734,330	-		DZA65_RS08250	0.11	+1.6
1,734,330	-		DZA65_RS08250	0.11	+1.3
1,734,366	-		DZA65_RS08250	0.13	+1.2
1,734,367	+		DZA65_RS08250	0.13	+0.1
1,734,367	+		DZA65_RS08250	0.13	+0.3
1,734,368	-		DZA65_RS08250	0.13	-0.6
1,734,368	-		DZA65_RS08250	0.13	-0.7
1,734,383	-		DZA65_RS08250	0.13	+0.8
1,734,413	+		DZA65_RS08250	0.14	-0.0
1,734,413	+		DZA65_RS08250	0.14	-0.7
1,734,414	-		DZA65_RS08250	0.14	-2.1
1,734,414	-		DZA65_RS08250	0.14	-1.8
1,734,414	-		DZA65_RS08250	0.14	-2.0
1,734,414	-		DZA65_RS08250	0.14	+0.4
1,734,414	-		DZA65_RS08250	0.14	-0.2
1,734,414	-		DZA65_RS08250	0.14	-0.1
1,734,417	+		DZA65_RS08250	0.14	-1.3
1,734,417	+		DZA65_RS08250	0.14	-3.5
1,734,417	+		DZA65_RS08250	0.14	+0.2
1,734,418	-		DZA65_RS08250	0.14	+0.5
1,734,418	-		DZA65_RS08250	0.14	+0.7
1,734,418	-		DZA65_RS08250	0.14	+0.3
1,734,418	-		DZA65_RS08250	0.14	-1.7
1,734,418	-		DZA65_RS08250	0.14	+1.6
1,734,418	-		DZA65_RS08250	0.14	+0.5
1,734,462	+		DZA65_RS08250	0.16	+0.5
1,734,462	+		DZA65_RS08250	0.16	+1.0
1,734,462	+		DZA65_RS08250	0.16	-0.7
1,734,463	-		DZA65_RS08250	0.16	-0.1
1,734,463	-		DZA65_RS08250	0.16	+0.5
1,734,463	-		DZA65_RS08250	0.16	-1.7
1,734,546	+		DZA65_RS08250	0.18	-1.1
1,734,546	+		DZA65_RS08250	0.18	+0.3
1,734,546	+		DZA65_RS08250	0.18	-0.1
1,734,547	-		DZA65_RS08250	0.19	-0.1
1,734,547	-		DZA65_RS08250	0.19	+1.3
1,734,586	+		DZA65_RS08250	0.20	-0.3
1,734,586	+		DZA65_RS08250	0.20	-0.3
1,734,647	+		DZA65_RS08250	0.22	+0.3
1,734,668	+		DZA65_RS08250	0.22	+2.3
1,734,668	+		DZA65_RS08250	0.22	-1.7
1,734,669	-		DZA65_RS08250	0.23	+0.3
1,734,719	+		DZA65_RS08250	0.24	-0.7
1,734,720	-		DZA65_RS08250	0.24	-0.5
1,734,720	-		DZA65_RS08250	0.24	-0.4
1,734,720	-		DZA65_RS08250	0.24	-2.0
1,734,727	+		DZA65_RS08250	0.24	-0.7
1,734,727	+		DZA65_RS08250	0.24	+0.7
1,734,727	+		DZA65_RS08250	0.24	+0.5
1,734,727	+		DZA65_RS08250	0.24	-0.1
1,734,727	+		DZA65_RS08250	0.24	-0.7
1,734,727	+		DZA65_RS08250	0.24	+0.5
1,734,727	+		DZA65_RS08250	0.24	+0.9
1,734,727	+		DZA65_RS08250	0.24	-0.3
1,734,727	+		DZA65_RS08250	0.24	-0.0
1,734,728	-		DZA65_RS08250	0.24	+0.6
1,734,728	-		DZA65_RS08250	0.24	-0.0
1,734,728	-		DZA65_RS08250	0.24	+0.6
1,734,728	-				-1.3
1,734,728	-		DZA65_RS08250	0.24	+0.7
1,734,728	-		DZA65_RS08250	0.24	-3.4
1,734,728	-		DZA65_RS08250	0.24	+1.3
1,734,728	-		DZA65_RS08250	0.24	-0.2
1,734,728	-		DZA65_RS08250	0.24	-1.0
1,734,728	-		DZA65_RS08250	0.24	-2.0
1,734,731	+		DZA65_RS08250	0.25	+0.3
1,734,731	+		DZA65_RS08250	0.25	+0.5
1,734,731	+		DZA65_RS08250	0.25	-1.7
1,734,732	-		DZA65_RS08250	0.25	-0.2
1,734,732	-		DZA65_RS08250	0.25	+0.7
1,734,732	-		DZA65_RS08250	0.25	-2.0
1,734,734	+		DZA65_RS08250	0.25	-0.1
1,734,735	-				-0.7
1,734,735	-		DZA65_RS08250	0.25	-2.0
1,734,735	-		DZA65_RS08250	0.25	-0.5
1,734,738	-		DZA65_RS08250	0.25	-0.7
1,734,773	+		DZA65_RS08250	0.26	-1.3
1,734,783	+		DZA65_RS08250	0.26	+1.0
1,734,783	+		DZA65_RS08250	0.26	-1.9
1,734,784	-		DZA65_RS08250	0.26	+0.4
1,734,908	+		DZA65_RS08250	0.30	-2.7
1,734,908	+		DZA65_RS08250	0.30	+0.5
1,734,908	+		DZA65_RS08250	0.30	-1.7
1,734,908	+		DZA65_RS08250	0.30	+0.7
1,734,908	+		DZA65_RS08250	0.30	+0.1
1,734,908	+		DZA65_RS08250	0.30	+0.9
1,734,909	-		DZA65_RS08250	0.30	-0.3
1,734,909	-		DZA65_RS08250	0.30	-0.1
1,734,909	-		DZA65_RS08250	0.30	+1.9
1,734,909	-		DZA65_RS08250	0.30	-0.1
1,734,909	-		DZA65_RS08250	0.30	-1.3
1,734,909	-		DZA65_RS08250	0.30	-0.4
1,734,911	+		DZA65_RS08250	0.30	+0.1
1,734,911	+		DZA65_RS08250	0.30	+0.2
1,734,911	+		DZA65_RS08250	0.30	-0.0
1,734,911	+		DZA65_RS08250	0.30	+0.7
1,734,911	+		DZA65_RS08250	0.30	-0.1
1,734,911	+		DZA65_RS08250	0.30	-0.6
1,734,911	+		DZA65_RS08250	0.30	-0.1
1,734,911	+		DZA65_RS08250	0.30	+2.6
1,734,911	+		DZA65_RS08250	0.30	+0.7
1,734,912	-		DZA65_RS08250	0.30	+0.6
1,734,912	-		DZA65_RS08250	0.30	+0.4
1,734,912	-		DZA65_RS08250	0.30	+0.6
1,734,912	-		DZA65_RS08250	0.30	-0.1
1,734,912	-		DZA65_RS08250	0.30	+0.1
1,734,912	-		DZA65_RS08250	0.30	-1.5
1,734,912	-		DZA65_RS08250	0.30	+2.9
1,734,912	-		DZA65_RS08250	0.30	+0.3
1,734,912	-		DZA65_RS08250	0.30	-0.1