Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08065

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,682,485	+		DZA65_RS08055	0.81	-0.6
1,682,485	+		DZA65_RS08055	0.81	-0.7
1,682,485	+		DZA65_RS08055	0.81	-0.6
1,682,486	-		DZA65_RS08055	0.81	-0.5
1,682,530	+		DZA65_RS08055	0.84	-1.5
1,682,547	+		DZA65_RS08055	0.85	-0.7
1,682,547	+		DZA65_RS08055	0.85	-0.1
1,682,547	+		DZA65_RS08055	0.85	+1.1
1,682,547	+		DZA65_RS08055	0.85	-0.1
1,682,547	+		DZA65_RS08055	0.85	-2.0
1,682,547	+		DZA65_RS08055	0.85	+0.3
1,682,547	+		DZA65_RS08055	0.85	-0.7
1,682,547	+		DZA65_RS08055	0.85	-0.7
1,682,548	-		DZA65_RS08055	0.85	-0.1
1,682,548	-		DZA65_RS08055	0.85	-1.5
1,682,548	-		DZA65_RS08055	0.85	+0.5
1,682,548	-		DZA65_RS08055	0.85	+1.0
1,682,548	-		DZA65_RS08055	0.85	-1.3
1,682,548	-		DZA65_RS08055	0.85	+0.4
1,682,701	+				-0.3
1,682,701	+				-0.9
1,682,702	-				-0.8
1,682,702	-				+2.0
1,682,781	+				-1.5
1,682,784	+				-0.0
1,682,784	+				-0.6
1,682,785	-				-0.4
1,682,793	-				-2.3
1,682,793	-				+0.3
1,682,906	+				+0.3
1,682,906	+		DZA65_RS08060	0.15	+1.1
1,682,906	+		DZA65_RS08060	0.15	-0.6
1,682,907	-		DZA65_RS08060	0.15	+0.3
1,682,907	-		DZA65_RS08060	0.15	-3.2
1,682,907	-		DZA65_RS08060	0.15	-1.2
1,682,918	+		DZA65_RS08060	0.17	-0.9
1,682,918	+		DZA65_RS08060	0.17	+0.9
1,682,918	+		DZA65_RS08060	0.17	-1.5
1,682,919	-		DZA65_RS08060	0.17	+0.3
1,682,919	-		DZA65_RS08060	0.17	-0.3
1,682,919	-		DZA65_RS08060	0.17	-0.6
1,682,919	-		DZA65_RS08060	0.17	-1.7
1,683,020	+		DZA65_RS08060	0.32	-0.7
1,683,021	-		DZA65_RS08060	0.32	-0.1
1,683,033	+		DZA65_RS08060	0.34	+0.7
1,683,033	+		DZA65_RS08060	0.34	-0.5
1,683,033	+		DZA65_RS08060	0.34	-1.1
1,683,033	+		DZA65_RS08060	0.34	-0.3
1,683,033	+		DZA65_RS08060	0.34	-1.0
1,683,033	+		DZA65_RS08060	0.34	+0.1
1,683,033	+		DZA65_RS08060	0.34	-2.0
1,683,033	+		DZA65_RS08060	0.34	+0.7
1,683,034	-		DZA65_RS08060	0.34	-0.3
1,683,034	-				+0.3
1,683,034	-		DZA65_RS08060	0.34	-0.3
1,683,034	-		DZA65_RS08060	0.34	-2.3
1,683,034	-		DZA65_RS08060	0.34	-0.5
1,683,034	-		DZA65_RS08060	0.34	-0.7
1,683,034	-		DZA65_RS08060	0.34	+1.3
1,683,034	-		DZA65_RS08060	0.34	+0.4
1,683,034	-		DZA65_RS08060	0.34	+0.4
1,683,191	+		DZA65_RS08060	0.58	-0.3
1,683,191	+		DZA65_RS08060	0.58	-1.8
1,683,191	+		DZA65_RS08060	0.58	-0.0
1,683,191	+		DZA65_RS08060	0.58	+0.0
1,683,192	-		DZA65_RS08060	0.58	-1.3
1,683,192	-		DZA65_RS08060	0.58	-0.5
1,683,192	-		DZA65_RS08060	0.58	-0.5
1,683,192	-		DZA65_RS08060	0.58	-0.5
1,683,235	+		DZA65_RS08060	0.65	+0.3
1,683,309	+		DZA65_RS08060	0.76	-0.6
1,683,309	+		DZA65_RS08060	0.76	-0.8
1,683,309	+		DZA65_RS08060	0.76	-0.6
1,683,309	+		DZA65_RS08060	0.76	+0.3
1,683,309	+		DZA65_RS08060	0.76	+1.9
1,683,309	+		DZA65_RS08060	0.76	-1.3
1,683,309	+		DZA65_RS08060	0.76	-0.1
1,683,309	+		DZA65_RS08060	0.76	-0.7
1,683,309	+		DZA65_RS08060	0.76	-0.1
1,683,310	-		DZA65_RS08060	0.76	-0.2
1,683,310	-		DZA65_RS08060	0.76	+0.4
1,683,310	-		DZA65_RS08060	0.76	+0.9
1,683,348	+		DZA65_RS08060	0.82	+0.3
1,683,348	+		DZA65_RS08060	0.82	-1.5
1,683,360	+		DZA65_RS08060	0.84	-0.8
1,683,392	+		DZA65_RS08060	0.88	+1.3
1,683,392	+		DZA65_RS08060	0.88	+0.8
1,683,392	+		DZA65_RS08060	0.88	-2.5
1,683,392	+		DZA65_RS08060	0.88	+0.3
1,683,392	+		DZA65_RS08060	0.88	-0.5
1,683,392	+		DZA65_RS08060	0.88	+0.3
1,683,392	+		DZA65_RS08060	0.88	-0.7
1,683,392	+		DZA65_RS08060	0.88	+0.3
1,683,392	+		DZA65_RS08060	0.88	-0.7
1,683,393	-		DZA65_RS08060	0.89	+1.1
1,683,393	-		DZA65_RS08060	0.89	-1.7
1,683,393	-		DZA65_RS08060	0.89	-0.7
1,683,393	-		DZA65_RS08060	0.89	-0.9
1,683,393	-		DZA65_RS08060	0.89	-0.7
1,683,393	-		DZA65_RS08060	0.89	-0.5
1,683,393	-		DZA65_RS08060	0.89	-1.2
1,683,393	-		DZA65_RS08060	0.89	-0.3
1,683,427	-				-0.8
1,683,525	+				-0.9
1,683,544	+				-0.7
1,683,545	-				+1.0
1,683,559	-				-1.7
1,683,559	-				+0.6
1,683,585	+				-0.0
1,683,638	+				-0.7
1,683,638	+				+0.3
1,683,638	+				-1.7
1,683,638	+				-0.9
1,683,640	+				+1.3
1,683,640	+				+1.3
1,683,641	-				+1.1
1,683,641	-				-0.1
1,683,857	+		DZA65_RS08065	0.17	-0.5
1,683,881	+		DZA65_RS08065	0.18	-0.4
1,683,881	+		DZA65_RS08065	0.18	-1.3
1,683,882	-		DZA65_RS08065	0.18	-1.7
1,683,887	+		DZA65_RS08065	0.18	-1.3
1,683,888	-		DZA65_RS08065	0.18	-0.0
1,683,888	-		DZA65_RS08065	0.18	+0.6
1,683,901	+		DZA65_RS08065	0.19	-1.2
1,683,901	+		DZA65_RS08065	0.19	-0.2
1,683,901	+		DZA65_RS08065	0.19	+0.5
1,683,901	+		DZA65_RS08065	0.19	-0.3
1,683,901	+		DZA65_RS08065	0.19	-1.2
1,683,902	-				+0.3
1,683,902	-		DZA65_RS08065	0.19	+1.3
1,683,902	-		DZA65_RS08065	0.19	+0.2
1,683,965	+		DZA65_RS08065	0.21	-2.3
1,683,965	+		DZA65_RS08065	0.21	-1.9
1,683,965	+		DZA65_RS08065	0.21	-0.6
1,683,965	+		DZA65_RS08065	0.21	+0.4
1,683,965	+		DZA65_RS08065	0.21	-0.6
1,683,965	+		DZA65_RS08065	0.21	+0.6
1,683,984	+		DZA65_RS08065	0.22	-0.1
1,683,984	+		DZA65_RS08065	0.22	-0.1
1,683,984	+		DZA65_RS08065	0.22	+0.7
1,683,984	+		DZA65_RS08065	0.22	-0.4
1,683,984	+		DZA65_RS08065	0.22	-2.0
1,683,984	+		DZA65_RS08065	0.22	+0.0
1,683,984	+		DZA65_RS08065	0.22	-0.8
1,683,984	+		DZA65_RS08065	0.22	+0.0
1,683,985	-		DZA65_RS08065	0.22	+0.2
1,683,985	-		DZA65_RS08065	0.22	-1.1
1,683,985	-		DZA65_RS08065	0.22	+0.8
1,683,985	-		DZA65_RS08065	0.22	+1.7
1,683,985	-		DZA65_RS08065	0.22	-2.1
1,683,985	-		DZA65_RS08065	0.22	+0.5
1,684,016	+		DZA65_RS08065	0.24	-1.7
1,684,044	+		DZA65_RS08065	0.25	+0.1
1,684,224	-		DZA65_RS08065	0.33	+0.4
1,684,224	-		DZA65_RS08065	0.33	+0.4
1,684,224	-		DZA65_RS08065	0.33	-2.7
1,684,300	+		DZA65_RS08065	0.36	-1.5
1,684,301	-		DZA65_RS08065	0.36	-0.2
1,684,464	+				+0.3
1,684,464	+		DZA65_RS08065	0.44	-0.3
1,684,464	+		DZA65_RS08065	0.44	-0.1
1,684,465	-		DZA65_RS08065	0.44	-2.0
1,684,465	-		DZA65_RS08065	0.44	-0.1
1,684,465	-		DZA65_RS08065	0.44	+0.0
1,684,465	-		DZA65_RS08065	0.44	+1.4
1,684,465	-		DZA65_RS08065	0.44	+0.3
1,684,465	-		DZA65_RS08065	0.44	-2.5
1,684,488	+		DZA65_RS08065	0.45	+0.6
1,684,488	+		DZA65_RS08065	0.45	+0.1
1,684,488	+		DZA65_RS08065	0.45	+0.8
1,684,488	+		DZA65_RS08065	0.45	-1.0
1,684,488	+		DZA65_RS08065	0.45	+0.3
1,684,488	+		DZA65_RS08065	0.45	-0.3
1,684,488	+		DZA65_RS08065	0.45	-0.5
1,684,489	-		DZA65_RS08065	0.45	-0.8
1,684,593	-		DZA65_RS08065	0.49	+0.9
1,684,873	+		DZA65_RS08065	0.62	-0.3
1,684,873	+		DZA65_RS08065	0.62	+0.9
1,684,873	+		DZA65_RS08065	0.62	-1.5
1,684,874	-		DZA65_RS08065	0.62	-0.4
1,684,874	-		DZA65_RS08065	0.62	-0.4
1,684,874	-		DZA65_RS08065	0.62	-0.7
1,684,878	+		DZA65_RS08065	0.62	-0.9
1,684,879	-		DZA65_RS08065	0.62	-0.3
1,684,885	+		DZA65_RS08065	0.62	-2.0
1,684,885	+		DZA65_RS08065	0.62	+1.5
1,684,885	+		DZA65_RS08065	0.62	-1.0
1,684,889	+		DZA65_RS08065	0.62	+0.3
1,684,889	+		DZA65_RS08065	0.62	-0.8
1,685,084	+		DZA65_RS08065	0.71	-0.5
1,685,084	+		DZA65_RS08065	0.71	-1.1
1,685,084	+		DZA65_RS08065	0.71	-0.5
1,685,085	-		DZA65_RS08065	0.71	-1.0
1,685,085	-		DZA65_RS08065	0.71	+0.5
1,685,085	-		DZA65_RS08065	0.71	+0.5
1,685,165	+		DZA65_RS08065	0.74	-0.3
1,685,165	+		DZA65_RS08065	0.74	-2.3
1,685,165	+		DZA65_RS08065	0.74	-0.2
1,685,165	+		DZA65_RS08065	0.74	-1.8
1,685,165	+		DZA65_RS08065	0.74	-1.1
1,685,165	+		DZA65_RS08065	0.74	-1.9
1,685,165	+		DZA65_RS08065	0.74	-0.6
1,685,165	+		DZA65_RS08065	0.74	-0.5
1,685,165	+		DZA65_RS08065	0.74	-0.2
1,685,165	+		DZA65_RS08065	0.74	-1.5
1,685,165	+		DZA65_RS08065	0.74	-1.0
1,685,165	+		DZA65_RS08065	0.74	-1.0
1,685,165	+		DZA65_RS08065	0.74	+0.4
1,685,165	+		DZA65_RS08065	0.74	+0.0
1,685,166	-		DZA65_RS08065	0.75	-1.3
1,685,166	-		DZA65_RS08065	0.75	-0.1
1,685,166	-		DZA65_RS08065	0.75	-0.3
1,685,166	-		DZA65_RS08065	0.75	-0.7
1,685,166	-		DZA65_RS08065	0.75	+0.3
1,685,166	-		DZA65_RS08065	0.75	-0.6
1,685,167	+		DZA65_RS08065	0.75	-1.7
1,685,167	+				+1.3
1,685,167	+		DZA65_RS08065	0.75	-1.3
1,685,168	-		DZA65_RS08065	0.75	-0.7
1,685,168	-		DZA65_RS08065	0.75	-1.3
1,685,168	-		DZA65_RS08065	0.75	-0.3
1,685,168	-		DZA65_RS08065	0.75	-1.7
1,685,227	-		DZA65_RS08065	0.77	-0.2
1,685,282	+		DZA65_RS08065	0.80	-1.7
1,685,282	+		DZA65_RS08065	0.80	+0.3
1,685,283	-		DZA65_RS08065	0.80	+0.7
1,685,317	+		DZA65_RS08065	0.81	-0.3
1,685,345	+		DZA65_RS08065	0.82	+0.4
1,685,345	+		DZA65_RS08065	0.82	+0.9
1,685,345	+		DZA65_RS08065	0.82	-2.2
1,685,346	-		DZA65_RS08065	0.82	-1.3
1,685,346	-		DZA65_RS08065	0.82	-1.9
1,685,346	-		DZA65_RS08065	0.82	+1.2
1,685,346	-		DZA65_RS08065	0.82	+1.0
1,685,346	-		DZA65_RS08065	0.82	-0.2
1,685,346	-		DZA65_RS08065	0.82	+1.4
1,685,346	-		DZA65_RS08065	0.82	-0.6
1,685,347	+		DZA65_RS08065	0.83	-0.5
1,685,347	+		DZA65_RS08065	0.83	+0.5
1,685,347	+		DZA65_RS08065	0.83	+0.8
1,685,347	+		DZA65_RS08065	0.83	-0.7
1,685,347	+		DZA65_RS08065	0.83	-1.7
1,685,347	+		DZA65_RS08065	0.83	+0.7
1,685,348	-		DZA65_RS08065	0.83	-0.7
1,685,348	-		DZA65_RS08065	0.83	-2.3
1,685,348	-		DZA65_RS08065	0.83	-0.0
1,685,348	-		DZA65_RS08065	0.83	-0.7
1,685,348	-		DZA65_RS08065	0.83	+0.5
1,685,348	-		DZA65_RS08065	0.83	-0.5
1,685,348	-		DZA65_RS08065	0.83	-0.2
1,685,349	+		DZA65_RS08065	0.83	+1.7
1,685,349	+		DZA65_RS08065	0.83	-0.0
1,685,349	+		DZA65_RS08065	0.83	-0.0
1,685,350	-		DZA65_RS08065	0.83	+0.3
1,685,350	-		DZA65_RS08065	0.83	-0.7
1,685,350	-		DZA65_RS08065	0.83	-0.6
1,685,350	-		DZA65_RS08065	0.83	-0.1
1,685,350	-		DZA65_RS08065	0.83	-0.9
1,685,407	+		DZA65_RS08065	0.85	-1.3
1,685,417	+		DZA65_RS08065	0.86	+0.8
1,685,417	+		DZA65_RS08065	0.86	-0.3
1,685,418	-		DZA65_RS08065	0.86	-0.7
1,685,418	-		DZA65_RS08065	0.86	-0.0
1,685,418	-		DZA65_RS08065	0.86	+1.1
1,685,418	-		DZA65_RS08065	0.86	-0.5
1,685,418	-		DZA65_RS08065	0.86	-0.4
1,685,418	-		DZA65_RS08065	0.86	+0.3
1,685,418	-		DZA65_RS08065	0.86	-0.7
1,685,418	-		DZA65_RS08065	0.86	-0.9
1,685,418	-		DZA65_RS08065	0.86	-0.5
1,685,418	-		DZA65_RS08065	0.86	+0.9
1,685,453	-		DZA65_RS08065	0.87	+1.0
1,685,542	+				-0.8
1,685,542	+				-0.3
1,685,543	-				+0.3
1,685,543	-				-2.0
1,685,543	-				+0.2
1,685,563	+				-0.2
1,685,564	-				-1.6
1,685,564	-				+1.0
1,685,567	+				-0.3
1,685,568	-				+0.1
1,685,568	-				+0.7
1,685,568	-				-0.9
1,685,671	+				+1.3
1,685,699	+				-0.2
1,685,700	-				+0.5
1,685,721	-				-0.4
1,685,769	+				-0.8
1,685,770	-				-0.3
1,685,801	+				+0.8
1,685,804	-				-0.3
1,685,929	+				-0.9
1,686,023	+				+1.9
1,686,088	+				-0.0
1,686,088	+				+0.6
1,686,088	+				+3.3
1,686,089	-				+0.0
1,686,089	-				+0.3
1,686,089	-				+0.0
1,686,103	+				+1.1
1,686,103	+				+0.6
1,686,135	+				+0.7
1,686,163	+				-0.7
1,686,163	+				-2.0
1,686,163	+				-0.1
1,686,163	+				+2.1
1,686,163	+				-0.6
1,686,167	+				+1.0
1,686,184	+				+0.5
1,686,184	+				+0.9
1,686,279	+				-0.3
1,686,279	+				-0.5
1,686,279	+				+0.3
1,686,279	+				+0.3
1,686,280	-				-0.3
1,686,280	-				+0.0
1,686,280	-				+0.9
1,686,280	-				-0.1
1,686,280	-				-0.1
1,686,280	-				-0.9
1,686,356	+				-0.1
1,686,356	+				+0.1
1,686,356	+				+0.4
1,686,356	+				-1.7
1,686,356	+				-1.5
1,686,356	+				-0.0
1,686,357	-				+0.0
1,686,357	-				+0.0
1,686,357	-				+0.6
1,686,357	-				+0.0
1,686,357	-				-0.3
1,686,357	-				+0.3
1,686,357	-				+1.0
1,686,357	-				-0.7
1,686,436	+		DZA65_RS08070	0.13	+2.9
1,686,437	-		DZA65_RS08070	0.13	+2.3
1,686,480	+		DZA65_RS08070	0.16	-0.5
1,686,540	+		DZA65_RS08070	0.20	+0.5
1,686,540	+		DZA65_RS08070	0.20	-1.1
1,686,540	+		DZA65_RS08070	0.20	-0.7
1,686,540	+		DZA65_RS08070	0.20	+0.1
1,686,540	+		DZA65_RS08070	0.20	+1.0
1,686,541	-		DZA65_RS08070	0.20	-0.1
1,686,541	-		DZA65_RS08070	0.20	-0.1
1,686,541	-		DZA65_RS08070	0.20	+1.0
1,686,541	-		DZA65_RS08070	0.20	+0.3
1,686,541	-		DZA65_RS08070	0.20	-0.4
1,686,541	-		DZA65_RS08070	0.20	+1.0
1,686,541	-		DZA65_RS08070	0.20	+0.6
1,686,541	-		DZA65_RS08070	0.20	-1.5
1,686,541	-		DZA65_RS08070	0.20	+0.3
1,686,620	-		DZA65_RS08070	0.26	+0.9
1,686,620	-		DZA65_RS08070	0.26	+0.3
1,686,688	+		DZA65_RS08070	0.31	-0.6
1,686,689	-		DZA65_RS08070	0.31	-0.4
1,686,727	+		DZA65_RS08070	0.34	+0.6