Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08055

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,680,089	+		DZA65_RS08045	0.84	+0.1
1,680,100	-		DZA65_RS08045	0.86	-0.3
1,680,193	+				-1.0
1,680,194	-				-0.7
1,680,194	-				-0.5
1,680,194	-				-1.1
1,680,263	+				-0.5
1,680,263	+				-0.1
1,680,263	+				-0.4
1,680,264	-				+0.2
1,680,264	-				-0.1
1,680,264	-				+0.6
1,680,320	+		DZA65_RS08050	0.15	-1.5
1,680,320	+		DZA65_RS08050	0.15	-0.1
1,680,320	+		DZA65_RS08050	0.15	+0.9
1,680,320	+		DZA65_RS08050	0.15	-1.9
1,680,320	+		DZA65_RS08050	0.15	+0.1
1,680,320	+		DZA65_RS08050	0.15	+0.8
1,680,321	-		DZA65_RS08050	0.15	-0.9
1,680,321	-		DZA65_RS08050	0.15	+0.5
1,680,321	-		DZA65_RS08050	0.15	+0.3
1,680,321	-		DZA65_RS08050	0.15	-1.3
1,680,321	-		DZA65_RS08050	0.15	-1.7
1,680,364	+		DZA65_RS08050	0.20	+0.9
1,680,365	-		DZA65_RS08050	0.20	-0.2
1,680,365	-		DZA65_RS08050	0.20	-0.0
1,680,365	-		DZA65_RS08050	0.20	-0.7
1,680,365	-		DZA65_RS08050	0.20	+2.9
1,680,462	-		DZA65_RS08050	0.31	-0.8
1,680,494	+		DZA65_RS08050	0.34	+0.3
1,680,494	+		DZA65_RS08050	0.34	-0.1
1,680,494	+		DZA65_RS08050	0.34	-2.3
1,680,495	-		DZA65_RS08050	0.34	+1.2
1,680,495	-		DZA65_RS08050	0.34	+1.5
1,680,495	-		DZA65_RS08050	0.34	-1.6
1,680,495	-		DZA65_RS08050	0.34	-2.0
1,680,495	-		DZA65_RS08050	0.34	+0.0
1,680,495	-		DZA65_RS08050	0.34	-0.4
1,680,495	-				+0.3
1,680,495	-				+1.9
1,680,495	-		DZA65_RS08050	0.34	-1.3
1,680,496	+		DZA65_RS08050	0.35	-0.1
1,680,496	+		DZA65_RS08050	0.35	+0.9
1,680,496	+		DZA65_RS08050	0.35	-0.7
1,680,496	+		DZA65_RS08050	0.35	-2.0
1,680,497	-		DZA65_RS08050	0.35	-0.0
1,680,497	-		DZA65_RS08050	0.35	-0.7
1,680,497	-		DZA65_RS08050	0.35	+0.1
1,680,511	+		DZA65_RS08050	0.36	-0.2
1,680,638	+		DZA65_RS08050	0.51	+0.4
1,680,639	-		DZA65_RS08050	0.51	+0.3
1,680,639	-		DZA65_RS08050	0.51	-1.1
1,680,639	-		DZA65_RS08050	0.51	+0.5
1,680,639	-		DZA65_RS08050	0.51	-1.8
1,680,639	-		DZA65_RS08050	0.51	-0.5
1,680,687	-		DZA65_RS08050	0.56	-1.1
1,680,727	+		DZA65_RS08050	0.61	-2.0
1,680,727	+		DZA65_RS08050	0.61	+0.9
1,680,727	+		DZA65_RS08050	0.61	-0.1
1,680,727	+		DZA65_RS08050	0.61	-1.3
1,680,727	+		DZA65_RS08050	0.61	-0.5
1,680,727	+		DZA65_RS08050	0.61	+0.5
1,680,788	+		DZA65_RS08050	0.68	-0.8
1,680,789	-		DZA65_RS08050	0.68	-0.3
1,680,826	+		DZA65_RS08050	0.72	+0.6
1,680,826	+		DZA65_RS08050	0.72	+1.5
1,680,871	+		DZA65_RS08050	0.77	-1.3
1,680,871	+		DZA65_RS08050	0.77	-0.1
1,680,871	+		DZA65_RS08050	0.77	-2.3
1,680,872	-		DZA65_RS08050	0.77	+0.2
1,680,872	-		DZA65_RS08050	0.77	-2.3
1,680,881	-		DZA65_RS08050	0.78	-0.7
1,680,913	+		DZA65_RS08050	0.82	-0.1
1,680,913	+		DZA65_RS08050	0.82	-0.1
1,680,913	+		DZA65_RS08050	0.82	+0.9
1,680,914	-		DZA65_RS08050	0.82	-1.3
1,680,914	-		DZA65_RS08050	0.82	+1.7
1,680,914	-		DZA65_RS08050	0.82	+0.1
1,680,914	-		DZA65_RS08050	0.82	-0.9
1,680,914	-		DZA65_RS08050	0.82	-1.0
1,680,914	-		DZA65_RS08050	0.82	+0.9
1,680,914	-		DZA65_RS08050	0.82	+1.6
1,681,026	+				+0.1
1,681,026	+				-1.7
1,681,027	-				+0.3
1,681,027	-				-0.5
1,681,027	-				-1.2
1,681,027	-				+0.4
1,681,027	-				-0.1
1,681,027	-				+1.8
1,681,027	-				+0.7
1,681,125	+				-0.1
1,681,125	+				-0.4
1,681,126	-				-1.1
1,681,126	-				-0.3
1,681,126	-				-0.6
1,681,126	-				-0.5
1,681,126	-				-1.3
1,681,126	-				-0.1
1,681,262	-		DZA65_RS08055	0.11	-0.1
1,681,317	+		DZA65_RS08055	0.14	+0.7
1,681,317	+		DZA65_RS08055	0.14	+0.3
1,681,318	-		DZA65_RS08055	0.14	+0.4
1,681,318	-		DZA65_RS08055	0.14	-3.5
1,681,318	-		DZA65_RS08055	0.14	-1.5
1,681,320	+				+0.3
1,681,321	-		DZA65_RS08055	0.15	-0.8
1,681,367	+		DZA65_RS08055	0.17	-1.9
1,681,367	+		DZA65_RS08055	0.17	-0.5
1,681,367	+		DZA65_RS08055	0.17	-0.6
1,681,367	+		DZA65_RS08055	0.17	+1.4
1,681,368	-		DZA65_RS08055	0.17	+0.3
1,681,368	-		DZA65_RS08055	0.17	+0.9
1,681,368	-		DZA65_RS08055	0.17	-0.1
1,681,368	-		DZA65_RS08055	0.17	+0.3
1,681,509	+		DZA65_RS08055	0.25	-2.1
1,681,509	+		DZA65_RS08055	0.25	-3.0
1,681,509	+		DZA65_RS08055	0.25	-0.2
1,681,509	+		DZA65_RS08055	0.25	+0.1
1,681,509	+				+0.3
1,681,510	-		DZA65_RS08055	0.25	-0.9
1,681,510	-		DZA65_RS08055	0.25	-1.8
1,681,510	-		DZA65_RS08055	0.25	-1.2
1,681,510	-		DZA65_RS08055	0.25	-1.6
1,681,510	-		DZA65_RS08055	0.25	-0.3
1,681,510	-		DZA65_RS08055	0.25	-0.6
1,681,510	-		DZA65_RS08055	0.25	+0.3
1,681,510	-		DZA65_RS08055	0.25	+0.3
1,681,544	+		DZA65_RS08055	0.27	-0.2
1,681,616	+		DZA65_RS08055	0.31	-0.3
1,681,661	+		DZA65_RS08055	0.34	-0.1
1,681,661	+		DZA65_RS08055	0.34	-0.2
1,681,661	+		DZA65_RS08055	0.34	-0.7
1,681,662	-		DZA65_RS08055	0.34	-1.0
1,681,664	+		DZA65_RS08055	0.34	-0.1
1,681,665	-		DZA65_RS08055	0.34	-3.0
1,681,665	-		DZA65_RS08055	0.34	-0.6
1,681,689	+		DZA65_RS08055	0.36	-0.5
1,681,690	-		DZA65_RS08055	0.36	-0.4
1,681,714	+		DZA65_RS08055	0.37	-0.4
1,681,824	+		DZA65_RS08055	0.43	-1.1
1,681,824	+		DZA65_RS08055	0.43	-1.8
1,681,825	-		DZA65_RS08055	0.43	-1.0
1,682,052	+		DZA65_RS08055	0.57	-0.2
1,682,052	+		DZA65_RS08055	0.57	-1.6
1,682,269	-		DZA65_RS08055	0.69	+0.0
1,682,300	+		DZA65_RS08055	0.71	-2.5
1,682,301	-		DZA65_RS08055	0.71	+0.0
1,682,301	-		DZA65_RS08055	0.71	-0.7
1,682,301	-		DZA65_RS08055	0.71	+0.7
1,682,334	-		DZA65_RS08055	0.73	+0.0
1,682,406	+		DZA65_RS08055	0.77	+0.0
1,682,415	+		DZA65_RS08055	0.77	-2.6
1,682,415	+		DZA65_RS08055	0.77	-0.4
1,682,416	-		DZA65_RS08055	0.77	-0.1
1,682,485	+		DZA65_RS08055	0.81	-0.6
1,682,485	+		DZA65_RS08055	0.81	-0.7
1,682,485	+		DZA65_RS08055	0.81	-0.6
1,682,486	-		DZA65_RS08055	0.81	-0.5
1,682,530	+		DZA65_RS08055	0.84	-1.5
1,682,547	+		DZA65_RS08055	0.85	-0.7
1,682,547	+		DZA65_RS08055	0.85	-0.1
1,682,547	+		DZA65_RS08055	0.85	+1.1
1,682,547	+		DZA65_RS08055	0.85	-0.1
1,682,547	+		DZA65_RS08055	0.85	-2.0
1,682,547	+		DZA65_RS08055	0.85	+0.3
1,682,547	+		DZA65_RS08055	0.85	-0.7
1,682,547	+		DZA65_RS08055	0.85	-0.7
1,682,548	-		DZA65_RS08055	0.85	-0.1
1,682,548	-		DZA65_RS08055	0.85	-1.5
1,682,548	-		DZA65_RS08055	0.85	+0.5
1,682,548	-		DZA65_RS08055	0.85	+1.0
1,682,548	-		DZA65_RS08055	0.85	-1.3
1,682,548	-		DZA65_RS08055	0.85	+0.4
1,682,701	+				-0.3
1,682,701	+				-0.9
1,682,702	-				-0.8
1,682,702	-				+2.0
1,682,781	+				-1.5
1,682,784	+				-0.0
1,682,784	+				-0.6
1,682,785	-				-0.4
1,682,793	-				-2.3
1,682,793	-				+0.3
1,682,906	+				+0.3
1,682,906	+		DZA65_RS08060	0.15	+1.1
1,682,906	+		DZA65_RS08060	0.15	-0.6
1,682,907	-		DZA65_RS08060	0.15	+0.3
1,682,907	-		DZA65_RS08060	0.15	-3.2
1,682,907	-		DZA65_RS08060	0.15	-1.2
1,682,918	+		DZA65_RS08060	0.17	-0.9
1,682,918	+		DZA65_RS08060	0.17	+0.9
1,682,918	+		DZA65_RS08060	0.17	-1.5
1,682,919	-		DZA65_RS08060	0.17	+0.3
1,682,919	-		DZA65_RS08060	0.17	-0.3
1,682,919	-		DZA65_RS08060	0.17	-0.6
1,682,919	-		DZA65_RS08060	0.17	-1.7
1,683,020	+		DZA65_RS08060	0.32	-0.7
1,683,021	-		DZA65_RS08060	0.32	-0.1
1,683,033	+		DZA65_RS08060	0.34	+0.7
1,683,033	+		DZA65_RS08060	0.34	-0.5
1,683,033	+		DZA65_RS08060	0.34	-1.1
1,683,033	+		DZA65_RS08060	0.34	-0.3
1,683,033	+		DZA65_RS08060	0.34	-1.0
1,683,033	+		DZA65_RS08060	0.34	+0.1
1,683,033	+		DZA65_RS08060	0.34	-2.0
1,683,033	+		DZA65_RS08060	0.34	+0.7
1,683,034	-		DZA65_RS08060	0.34	-0.3
1,683,034	-				+0.3
1,683,034	-		DZA65_RS08060	0.34	-0.3
1,683,034	-		DZA65_RS08060	0.34	-2.3
1,683,034	-		DZA65_RS08060	0.34	-0.5
1,683,034	-		DZA65_RS08060	0.34	-0.7
1,683,034	-		DZA65_RS08060	0.34	+1.3
1,683,034	-		DZA65_RS08060	0.34	+0.4
1,683,034	-		DZA65_RS08060	0.34	+0.4
1,683,191	+		DZA65_RS08060	0.58	-0.3
1,683,191	+		DZA65_RS08060	0.58	-1.8
1,683,191	+		DZA65_RS08060	0.58	-0.0
1,683,191	+		DZA65_RS08060	0.58	+0.0
1,683,192	-		DZA65_RS08060	0.58	-1.3
1,683,192	-		DZA65_RS08060	0.58	-0.5
1,683,192	-		DZA65_RS08060	0.58	-0.5
1,683,192	-		DZA65_RS08060	0.58	-0.5
1,683,235	+		DZA65_RS08060	0.65	+0.3
1,683,309	+		DZA65_RS08060	0.76	-0.6
1,683,309	+		DZA65_RS08060	0.76	-0.8
1,683,309	+		DZA65_RS08060	0.76	-0.6
1,683,309	+		DZA65_RS08060	0.76	+0.3
1,683,309	+		DZA65_RS08060	0.76	+1.9
1,683,309	+		DZA65_RS08060	0.76	-1.3
1,683,309	+		DZA65_RS08060	0.76	-0.1
1,683,309	+		DZA65_RS08060	0.76	-0.7
1,683,309	+		DZA65_RS08060	0.76	-0.1
1,683,310	-		DZA65_RS08060	0.76	-0.2
1,683,310	-		DZA65_RS08060	0.76	+0.4
1,683,310	-		DZA65_RS08060	0.76	+0.9
1,683,348	+		DZA65_RS08060	0.82	+0.3
1,683,348	+		DZA65_RS08060	0.82	-1.5
1,683,360	+		DZA65_RS08060	0.84	-0.8
1,683,392	+		DZA65_RS08060	0.88	+1.3
1,683,392	+		DZA65_RS08060	0.88	+0.8
1,683,392	+		DZA65_RS08060	0.88	-2.5
1,683,392	+		DZA65_RS08060	0.88	+0.3
1,683,392	+		DZA65_RS08060	0.88	-0.5
1,683,392	+		DZA65_RS08060	0.88	+0.3
1,683,392	+		DZA65_RS08060	0.88	-0.7
1,683,392	+		DZA65_RS08060	0.88	+0.3
1,683,392	+		DZA65_RS08060	0.88	-0.7
1,683,393	-		DZA65_RS08060	0.89	+1.1
1,683,393	-		DZA65_RS08060	0.89	-1.7
1,683,393	-		DZA65_RS08060	0.89	-0.7
1,683,393	-		DZA65_RS08060	0.89	-0.9
1,683,393	-		DZA65_RS08060	0.89	-0.7
1,683,393	-		DZA65_RS08060	0.89	-0.5
1,683,393	-		DZA65_RS08060	0.89	-1.2
1,683,393	-		DZA65_RS08060	0.89	-0.3
1,683,427	-				-0.8
1,683,525	+				-0.9
1,683,544	+				-0.7
1,683,545	-				+1.0
1,683,559	-				-1.7
1,683,559	-				+0.6
1,683,585	+				-0.0
1,683,638	+				-0.7
1,683,638	+				+0.3
1,683,638	+				-1.7
1,683,638	+				-0.9
1,683,640	+				+1.3
1,683,640	+				+1.3
1,683,641	-				+1.1
1,683,641	-				-0.1