Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06400

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,333,578	+		DZA65_RS06395	0.48	+0.2
1,333,578	+		DZA65_RS06395	0.48	-2.7
1,333,578	+		DZA65_RS06395	0.48	-0.5
1,333,579	-		DZA65_RS06395	0.48	-0.5
1,333,579	-		DZA65_RS06395	0.48	+0.0
1,333,579	-		DZA65_RS06395	0.48	-0.7
1,333,659	-		DZA65_RS06395	0.53	-2.7
1,333,707	+		DZA65_RS06395	0.56	+0.7
1,333,707	+		DZA65_RS06395	0.56	+2.1
1,333,708	-		DZA65_RS06395	0.56	-1.1
1,333,708	-		DZA65_RS06395	0.56	+0.4
1,333,725	+		DZA65_RS06395	0.58	-1.1
1,333,725	+		DZA65_RS06395	0.58	-2.1
1,333,725	+		DZA65_RS06395	0.58	+0.3
1,333,725	+		DZA65_RS06395	0.58	+0.5
1,333,725	+		DZA65_RS06395	0.58	-0.4
1,333,725	+		DZA65_RS06395	0.58	+0.5
1,333,725	+		DZA65_RS06395	0.58	+0.5
1,333,726	-		DZA65_RS06395	0.58	-0.3
1,333,726	-		DZA65_RS06395	0.58	-1.3
1,333,726	-		DZA65_RS06395	0.58	+0.8
1,333,726	-		DZA65_RS06395	0.58	-0.0
1,333,726	-		DZA65_RS06395	0.58	-0.7
1,333,726	-		DZA65_RS06395	0.58	+1.3
1,333,726	-		DZA65_RS06395	0.58	+0.2
1,333,726	-		DZA65_RS06395	0.58	+0.0
1,333,726	-		DZA65_RS06395	0.58	+0.6
1,333,726	-		DZA65_RS06395	0.58	-1.4
1,333,726	-		DZA65_RS06395	0.58	-0.4
1,333,726	-		DZA65_RS06395	0.58	-0.7
1,333,726	-		DZA65_RS06395	0.58	-0.1
1,333,726	-		DZA65_RS06395	0.58	+0.9
1,333,759	+		DZA65_RS06395	0.60	-0.9
1,333,759	+		DZA65_RS06395	0.60	+0.6
1,333,759	+		DZA65_RS06395	0.60	-0.4
1,333,759	+		DZA65_RS06395	0.60	+0.5
1,333,759	+		DZA65_RS06395	0.60	-0.1
1,333,759	+		DZA65_RS06395	0.60	-0.5
1,333,759	+		DZA65_RS06395	0.60	+0.3
1,333,759	+		DZA65_RS06395	0.60	-0.8
1,333,759	+		DZA65_RS06395	0.60	+1.5
1,333,760	-		DZA65_RS06395	0.60	-0.9
1,333,760	-		DZA65_RS06395	0.60	-0.1
1,333,760	-		DZA65_RS06395	0.60	-1.7
1,333,760	-		DZA65_RS06395	0.60	+0.9
1,333,760	-		DZA65_RS06395	0.60	-0.0
1,333,800	-		DZA65_RS06395	0.63	+0.5
1,333,873	+		DZA65_RS06395	0.67	+0.1
1,333,873	+		DZA65_RS06395	0.67	+0.0
1,333,873	+		DZA65_RS06395	0.67	-0.5
1,333,990	+		DZA65_RS06395	0.75	-0.8
1,333,990	+		DZA65_RS06395	0.75	-0.4
1,333,991	-		DZA65_RS06395	0.75	-0.1
1,334,049	-		DZA65_RS06395	0.79	+1.1
1,334,096	+		DZA65_RS06395	0.82	-0.1
1,334,096	+		DZA65_RS06395	0.82	+0.8
1,334,096	+		DZA65_RS06395	0.82	+0.1
1,334,096	+		DZA65_RS06395	0.82	-1.8
1,334,096	+		DZA65_RS06395	0.82	-0.5
1,334,097	-		DZA65_RS06395	0.82	+1.2
1,334,097	-		DZA65_RS06395	0.82	+1.0
1,334,097	-		DZA65_RS06395	0.82	-2.3
1,334,097	-		DZA65_RS06395	0.82	-1.5
1,334,097	-		DZA65_RS06395	0.82	+0.5
1,334,100	+		DZA65_RS06395	0.82	-1.5
1,334,100	+		DZA65_RS06395	0.82	-0.1
1,334,100	+		DZA65_RS06395	0.82	-0.3
1,334,100	+		DZA65_RS06395	0.82	-1.3
1,334,100	+				+1.5
1,334,100	+		DZA65_RS06395	0.82	-2.1
1,334,100	+		DZA65_RS06395	0.82	+0.2
1,334,100	+		DZA65_RS06395	0.82	+0.5
1,334,101	-		DZA65_RS06395	0.82	-2.3
1,334,101	-		DZA65_RS06395	0.82	+0.1
1,334,101	-		DZA65_RS06395	0.82	+0.5
1,334,101	-		DZA65_RS06395	0.82	+0.2
1,334,101	-		DZA65_RS06395	0.82	+0.2
1,334,101	-		DZA65_RS06395	0.82	+1.1
1,334,101	-		DZA65_RS06395	0.82	-3.3
1,334,206	-		DZA65_RS06395	0.89	-0.2
1,334,279	+				+0.6
1,334,292	+				+1.2
1,334,292	+				-0.7
1,334,293	-				+0.1
1,334,293	-				+0.5
1,334,309	+				-0.5
1,334,310	-				-0.5
1,334,310	-				+0.3
1,334,352	+				+0.3
1,334,353	-				-0.5
1,334,353	-				+0.2
1,334,353	-				+0.2
1,334,369	+				-0.3
1,334,369	+				+1.2
1,334,369	+				-0.0
1,334,369	+				+1.2
1,334,369	+				+0.5
1,334,369	+				-2.5
1,334,369	+				-0.5
1,334,369	+				+1.5
1,334,369	+				-0.0
1,334,369	+				+0.1
1,334,369	+				-0.2
1,334,369	+				-0.9
1,334,369	+				+0.3
1,334,369	+				+0.2
1,334,370	-				+0.7
1,334,370	-				+0.5
1,334,370	-				-1.1
1,334,370	-				+0.0
1,334,370	-				+0.6
1,334,370	-				+0.5
1,334,370	-				+0.3
1,334,370	-				+0.9
1,334,370	-				-0.8
1,334,370	-				-0.4
1,334,370	-				-0.2
1,334,370	-				-0.5
1,334,371	+				-0.8
1,334,371	+				+1.1
1,334,371	+				-0.5
1,334,371	+				+0.1
1,334,371	+				+2.4
1,334,371	+				+0.3
1,334,371	+				-0.1
1,334,371	+				-0.0
1,334,371	+				-0.6
1,334,371	+				+0.3
1,334,371	+				-0.6
1,334,371	+				+0.2
1,334,371	+				-2.3
1,334,371	+				+0.1
1,334,372	-				+2.8
1,334,372	-				-0.1
1,334,372	-				+0.9
1,334,372	-				-0.6
1,334,372	-				+1.0
1,334,372	-				-0.3
1,334,372	-				-1.5
1,334,372	-				-0.4
1,334,372	-				-0.5
1,334,372	-				-0.3
1,334,372	-				+1.2
1,334,372	-				+0.3
1,334,372	-				-0.7
1,334,372	-				-0.1
1,334,372	-				+0.8
1,334,372	-				+1.1
1,334,374	+				-1.1
1,334,374	+				+0.2
1,334,374	+				-0.3
1,334,374	+				-2.1
1,334,375	-				-0.3
1,334,375	-				+1.6
1,334,387	+				-0.2
1,334,387	+				+0.5
1,334,387	+				+0.1
1,334,388	-				-0.2
1,334,388	-				+0.4
1,334,388	-				-0.5
1,334,388	-				-0.5
1,334,391	+				+0.2
1,334,391	+				-0.7
1,334,391	+				+1.2
1,334,493	-				+0.5
1,334,493	-				+0.0
1,334,493	-				-0.2
1,334,493	-				-1.5
1,334,493	-				+0.8
1,334,534	+				-0.7
1,334,534	+				-0.1
1,334,535	-				-1.5
1,334,535	-				+0.5
1,334,535	-				-0.1
1,334,548	+				+0.4
1,334,548	+				-1.0
1,334,548	+				+1.0
1,334,548	+				+0.3
1,334,548	+				+0.7
1,334,549	-				+2.2
1,334,549	-				-0.5
1,334,549	-				+0.5
1,334,739	+		DZA65_RS06400	0.25	+1.1
1,334,739	+		DZA65_RS06400	0.25	+1.2
1,334,739	+		DZA65_RS06400	0.25	+2.3
1,334,739	+		DZA65_RS06400	0.25	+0.9
1,334,739	+		DZA65_RS06400	0.25	-0.6
1,334,740	-		DZA65_RS06400	0.25	+0.2
1,334,740	-		DZA65_RS06400	0.25	+0.7
1,334,740	-		DZA65_RS06400	0.25	+0.1
1,334,936	+		DZA65_RS06400	0.45	+0.1
1,334,936	+		DZA65_RS06400	0.45	-1.5
1,334,936	+		DZA65_RS06400	0.45	-1.1
1,334,936	+		DZA65_RS06400	0.45	-0.1
1,334,936	+		DZA65_RS06400	0.45	-1.7
1,334,936	+		DZA65_RS06400	0.45	-0.2
1,334,936	+		DZA65_RS06400	0.45	+0.9
1,334,937	-		DZA65_RS06400	0.45	-1.1
1,334,937	-		DZA65_RS06400	0.45	+0.2
1,334,937	-		DZA65_RS06400	0.45	+0.5
1,334,937	-		DZA65_RS06400	0.45	+0.6
1,334,937	-		DZA65_RS06400	0.45	+0.6
1,334,937	-		DZA65_RS06400	0.45	-1.5
1,334,937	-		DZA65_RS06400	0.45	-0.9
1,335,082	-		DZA65_RS06400	0.59	+0.2
1,335,098	+				-0.1
1,335,098	+		DZA65_RS06400	0.61	+0.1
1,335,098	+		DZA65_RS06400	0.61	+1.0
1,335,098	+		DZA65_RS06400	0.61	+1.0
1,335,098	+		DZA65_RS06400	0.61	-0.5
1,335,098	+		DZA65_RS06400	0.61	+0.1
1,335,098	+		DZA65_RS06400	0.61	-0.8
1,335,099	-		DZA65_RS06400	0.61	-0.4
1,335,099	-		DZA65_RS06400	0.61	-0.5
1,335,102	-		DZA65_RS06400	0.61	-1.0
1,335,114	-		DZA65_RS06400	0.63	+0.6
1,335,114	-		DZA65_RS06400	0.63	-0.1
1,335,114	-		DZA65_RS06400	0.63	+1.0
1,335,147	+		DZA65_RS06400	0.66	+0.3
1,335,147	+		DZA65_RS06400	0.66	+1.1
1,335,148	-		DZA65_RS06400	0.66	-0.0
1,335,247	-		DZA65_RS06400	0.76	+0.2
1,335,262	+		DZA65_RS06400	0.77	+1.6
1,335,348	+		DZA65_RS06400	0.86	-0.3
1,335,369	+		DZA65_RS06400	0.88	-0.2
1,335,369	+		DZA65_RS06400	0.88	+1.2
1,335,369	+		DZA65_RS06400	0.88	-1.8
1,335,369	+		DZA65_RS06400	0.88	-0.4
1,335,369	+		DZA65_RS06400	0.88	-2.5
1,335,369	+		DZA65_RS06400	0.88	-0.0
1,335,369	+		DZA65_RS06400	0.88	+0.0
1,335,370	-		DZA65_RS06400	0.88	-0.5
1,335,370	-		DZA65_RS06400	0.88	-0.4
1,335,370	-		DZA65_RS06400	0.88	+0.5
1,335,370	-		DZA65_RS06400	0.88	+1.5
1,335,370	-		DZA65_RS06400	0.88	+0.1
1,335,383	+		DZA65_RS06400	0.90	-0.0
1,335,384	-		DZA65_RS06400	0.90	+2.2
1,335,384	-		DZA65_RS06400	0.90	-0.4
1,335,389	+				+0.9
1,335,389	+				+0.8
1,335,390	-				+0.2
1,335,390	-				+0.6
1,335,390	-				+0.5
1,335,390	-				+1.5
1,335,480	+				-0.4
1,335,480	+				-1.7
1,335,480	+				+0.5
1,335,481	-				-0.4
1,335,481	-				-1.5
1,335,481	-				+0.7
1,335,481	-				-0.5
1,335,481	-				-1.1
1,335,481	-				-0.7
1,335,490	-				-0.8
1,335,490	-				+0.5
1,335,501	+				-0.6
1,335,501	+				-0.8
1,335,502	-				-0.4
1,335,502	-				-0.7
1,335,502	-				-0.3
1,335,510	+				+0.7
1,335,511	-				-1.3
1,335,541	-				-0.8
1,335,541	-				+1.2
1,335,546	+				+0.3
1,335,546	+				-0.8
1,335,546	+				+0.3
1,335,546	+				-0.5
1,335,546	+				+0.6
1,335,546	+				-0.2
1,335,547	-				+2.1
1,335,547	-				-1.6
1,335,547	-				+1.6
1,335,547	-				+0.8
1,335,547	-				-2.3
1,335,547	-				+0.1
1,335,547	-				-0.9
1,335,547	-				-0.2
1,335,547	-				+0.1
1,335,549	+				-0.7
1,335,549	+				+0.3
1,335,562	+				-0.1
1,335,585	+				-0.4
1,335,585	+				-1.3
1,335,623	+				-0.5
1,335,698	+				+1.0
1,335,698	+				+2.8
1,335,699	-				-0.5
1,335,699	-				+0.7
1,335,699	-				-0.1
1,335,775	-				+0.1
1,335,775	-				-0.6
1,335,775	-				+0.3
1,335,798	-				-0.3
1,335,810	+				+0.5
1,335,810	+				+0.3
1,335,829	+				-0.3
1,335,830	-				-1.1
1,335,885	-				+0.2
1,335,885	-				-0.9
1,335,991	-				-1.7
1,336,029	-		DZA65_RS06410	0.13	-0.4
1,336,171	+		DZA65_RS06410	0.27	+1.0
1,336,172	-		DZA65_RS06410	0.27	+0.2
1,336,338	+		DZA65_RS06410	0.44	+1.1
1,336,360	+		DZA65_RS06410	0.46	-0.1
1,336,394	+		DZA65_RS06410	0.49	-1.6
1,336,395	-		DZA65_RS06410	0.49	-1.5
1,336,395	-		DZA65_RS06410	0.49	-1.5
1,336,395	-		DZA65_RS06410	0.49	-0.3
1,336,395	-		DZA65_RS06410	0.49	+0.4
1,336,395	-		DZA65_RS06410	0.49	-1.2
1,336,395	-		DZA65_RS06410	0.49	+0.5