Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05195

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,066,086	+		DZA65_RS05190	0.14	-0.7
1,066,086	+		DZA65_RS05190	0.14	+1.5
1,066,087	-				+1.8
1,066,131	+		DZA65_RS05190	0.19	-0.2
1,066,131	+		DZA65_RS05190	0.19	+0.7
1,066,131	+		DZA65_RS05190	0.19	+1.2
1,066,151	+		DZA65_RS05190	0.20	-1.4
1,066,205	+		DZA65_RS05190	0.25	+0.1
1,066,205	+		DZA65_RS05190	0.25	-0.6
1,066,226	+		DZA65_RS05190	0.27	-0.5
1,066,226	+		DZA65_RS05190	0.27	-0.8
1,066,226	+		DZA65_RS05190	0.27	-0.5
1,066,227	-		DZA65_RS05190	0.28	+0.1
1,066,227	-		DZA65_RS05190	0.28	+1.1
1,066,227	-		DZA65_RS05190	0.28	+0.9
1,066,227	-		DZA65_RS05190	0.28	+0.0
1,066,229	+		DZA65_RS05190	0.28	-0.6
1,066,229	+		DZA65_RS05190	0.28	-0.2
1,066,229	+		DZA65_RS05190	0.28	-1.1
1,066,230	-		DZA65_RS05190	0.28	+1.8
1,066,247	+		DZA65_RS05190	0.29	-0.2
1,066,247	+		DZA65_RS05190	0.29	-0.1
1,066,247	+		DZA65_RS05190	0.29	-2.7
1,066,248	-		DZA65_RS05190	0.30	+0.2
1,066,248	-		DZA65_RS05190	0.30	+0.1
1,066,248	-		DZA65_RS05190	0.30	+0.2
1,066,248	-		DZA65_RS05190	0.30	-2.1
1,066,248	-		DZA65_RS05190	0.30	+1.3
1,066,248	-		DZA65_RS05190	0.30	-0.7
1,066,255	+		DZA65_RS05190	0.30	-0.3
1,066,274	-		DZA65_RS05190	0.32	-0.2
1,066,311	+		DZA65_RS05190	0.35	+0.0
1,066,311	+		DZA65_RS05190	0.35	-0.5
1,066,312	-		DZA65_RS05190	0.35	-2.1
1,066,312	-		DZA65_RS05190	0.35	-1.2
1,066,312	-		DZA65_RS05190	0.35	+1.1
1,066,312	-		DZA65_RS05190	0.35	-1.5
1,066,312	-		DZA65_RS05190	0.35	+0.3
1,066,350	+		DZA65_RS05190	0.39	+0.1
1,066,350	+		DZA65_RS05190	0.39	-0.4
1,066,350	+		DZA65_RS05190	0.39	-0.4
1,066,351	-		DZA65_RS05190	0.39	-1.5
1,066,351	-		DZA65_RS05190	0.39	-0.1
1,066,351	-		DZA65_RS05190	0.39	-0.7
1,066,351	-		DZA65_RS05190	0.39	-2.1
1,066,351	-		DZA65_RS05190	0.39	-0.0
1,066,351	-		DZA65_RS05190	0.39	-2.3
1,066,351	-		DZA65_RS05190	0.39	+0.6
1,066,388	+		DZA65_RS05190	0.43	-0.5
1,066,388	+		DZA65_RS05190	0.43	+1.3
1,066,388	+		DZA65_RS05190	0.43	+0.3
1,066,389	-		DZA65_RS05190	0.43	-1.2
1,066,389	-		DZA65_RS05190	0.43	-1.5
1,066,389	-		DZA65_RS05190	0.43	-0.7
1,066,389	-		DZA65_RS05190	0.43	+0.0
1,066,427	+		DZA65_RS05190	0.46	-0.5
1,066,431	-		DZA65_RS05190	0.47	+0.1
1,066,485	+		DZA65_RS05190	0.52	+0.3
1,066,485	+		DZA65_RS05190	0.52	-2.1
1,066,486	-		DZA65_RS05190	0.52	+0.1
1,066,486	-		DZA65_RS05190	0.52	+0.8
1,066,514	+		DZA65_RS05190	0.54	+0.0
1,066,514	+		DZA65_RS05190	0.54	-0.1
1,066,514	+		DZA65_RS05190	0.54	-0.2
1,066,515	-		DZA65_RS05190	0.54	+0.9
1,066,548	-		DZA65_RS05190	0.58	+0.9
1,066,582	+		DZA65_RS05190	0.61	+0.4
1,066,583	-		DZA65_RS05190	0.61	+0.5
1,066,583	-		DZA65_RS05190	0.61	+0.8
1,066,583	-		DZA65_RS05190	0.61	-0.6
1,066,594	+		DZA65_RS05190	0.62	+0.3
1,066,597	+		DZA65_RS05190	0.62	-0.7
1,066,597	+		DZA65_RS05190	0.62	-0.2
1,066,598	-		DZA65_RS05190	0.62	-0.1
1,066,688	+		DZA65_RS05190	0.71	-1.1
1,066,688	+		DZA65_RS05190	0.71	+1.9
1,066,688	+		DZA65_RS05190	0.71	+0.2
1,066,688	+		DZA65_RS05190	0.71	+0.5
1,066,688	+		DZA65_RS05190	0.71	-1.8
1,066,689	-		DZA65_RS05190	0.71	-0.4
1,066,689	-		DZA65_RS05190	0.71	-1.1
1,066,728	+		DZA65_RS05190	0.74	+0.6
1,066,728	+				-0.5
1,066,728	+		DZA65_RS05190	0.74	-0.3
1,066,729	-		DZA65_RS05190	0.74	-0.6
1,066,764	+		DZA65_RS05190	0.78	+0.4
1,066,764	+		DZA65_RS05190	0.78	+0.5
1,066,764	+		DZA65_RS05190	0.78	+0.5
1,066,764	+		DZA65_RS05190	0.78	-0.5
1,066,764	+		DZA65_RS05190	0.78	+0.9
1,066,764	+		DZA65_RS05190	0.78	+0.4
1,066,765	-		DZA65_RS05190	0.78	-0.1
1,066,765	-		DZA65_RS05190	0.78	+1.3
1,066,765	-		DZA65_RS05190	0.78	-0.1
1,066,765	-		DZA65_RS05190	0.78	+0.6
1,066,769	+		DZA65_RS05190	0.78	-0.1
1,066,769	+		DZA65_RS05190	0.78	-1.0
1,066,770	-		DZA65_RS05190	0.78	+1.1
1,066,770	-		DZA65_RS05190	0.78	+0.3
1,066,770	-		DZA65_RS05190	0.78	-0.3
1,066,770	-		DZA65_RS05190	0.78	+1.7
1,066,850	+		DZA65_RS05190	0.86	+0.8
1,066,850	+		DZA65_RS05190	0.86	-0.1
1,066,850	+		DZA65_RS05190	0.86	-1.0
1,066,851	-		DZA65_RS05190	0.86	-0.2
1,066,851	-		DZA65_RS05190	0.86	-0.2
1,066,851	-		DZA65_RS05190	0.86	-1.5
1,066,851	-		DZA65_RS05190	0.86	+0.2
1,066,851	-		DZA65_RS05190	0.86	-0.5
1,066,928	-				-1.3
1,066,928	-				-0.3
1,066,928	-				-1.5
1,066,939	+				-1.7
1,066,939	+				+1.1
1,066,939	+				+0.2
1,066,940	-				-0.8
1,066,940	-				-0.2
1,066,942	+				-2.1
1,066,942	+				+0.5
1,066,943	-				-0.1
1,066,949	+				+0.1
1,066,950	-				+0.5
1,066,967	+				-0.2
1,066,967	+				-3.1
1,066,968	-				+2.1
1,066,968	-				-0.2
1,066,968	-				+0.8
1,067,017	-				-0.2
1,067,069	-				-0.3
1,067,094	+				-0.5
1,067,095	-				+0.4
1,067,098	+				-0.4
1,067,099	-				+1.0
1,067,099	-				-0.7
1,067,099	-				-1.8
1,067,127	-				-0.1
1,067,138	+				-1.5
1,067,138	+				-0.5
1,067,174	-				-0.0
1,067,268	+		DZA65_RS05195	0.17	+0.2
1,067,269	-		DZA65_RS05195	0.17	+0.1
1,067,269	-		DZA65_RS05195	0.17	-0.3
1,067,389	+		DZA65_RS05195	0.27	+0.1
1,067,389	+		DZA65_RS05195	0.27	-0.3
1,067,389	+		DZA65_RS05195	0.27	+1.1
1,067,389	+		DZA65_RS05195	0.27	-0.3
1,067,389	+		DZA65_RS05195	0.27	+1.0
1,067,390	-				+0.5
1,067,390	-		DZA65_RS05195	0.27	+0.0
1,067,390	-		DZA65_RS05195	0.27	-0.9
1,067,390	-		DZA65_RS05195	0.27	-1.1
1,067,390	-		DZA65_RS05195	0.27	+0.5
1,067,405	+		DZA65_RS05195	0.29	+0.5
1,067,405	+		DZA65_RS05195	0.29	-0.6
1,067,405	+		DZA65_RS05195	0.29	+0.5
1,067,406	-		DZA65_RS05195	0.29	-0.2
1,067,414	-		DZA65_RS05195	0.29	-0.7
1,067,414	-		DZA65_RS05195	0.29	+0.5
1,067,474	+		DZA65_RS05195	0.34	+1.6
1,067,474	+		DZA65_RS05195	0.34	+2.3
1,067,475	-		DZA65_RS05195	0.34	+1.3
1,067,475	-		DZA65_RS05195	0.34	-1.1
1,067,475	-		DZA65_RS05195	0.34	-0.8
1,067,556	+		DZA65_RS05195	0.41	-0.3
1,067,556	+		DZA65_RS05195	0.41	+0.9
1,067,556	+		DZA65_RS05195	0.41	-0.5
1,067,556	+		DZA65_RS05195	0.41	+1.1
1,067,556	+		DZA65_RS05195	0.41	+0.1
1,067,556	+		DZA65_RS05195	0.41	+0.1
1,067,556	+		DZA65_RS05195	0.41	-0.4
1,067,557	-		DZA65_RS05195	0.41	+0.9
1,067,557	-		DZA65_RS05195	0.41	+1.4
1,067,557	-		DZA65_RS05195	0.41	-0.2
1,067,557	-		DZA65_RS05195	0.41	-2.1
1,067,557	-		DZA65_RS05195	0.41	+0.1
1,067,557	-		DZA65_RS05195	0.41	+3.3
1,067,557	-		DZA65_RS05195	0.41	-1.4
1,067,560	+		DZA65_RS05195	0.41	-1.7
1,067,560	+		DZA65_RS05195	0.41	-0.3
1,067,561	-		DZA65_RS05195	0.42	+0.3
1,067,577	+		DZA65_RS05195	0.43	+1.3
1,067,577	+		DZA65_RS05195	0.43	-1.5
1,067,577	+		DZA65_RS05195	0.43	-1.4
1,067,577	+		DZA65_RS05195	0.43	-1.8
1,067,577	+		DZA65_RS05195	0.43	+0.9
1,067,577	+		DZA65_RS05195	0.43	+1.0
1,067,577	+		DZA65_RS05195	0.43	-0.3
1,067,577	+		DZA65_RS05195	0.43	+0.1
1,067,578	-		DZA65_RS05195	0.43	+0.5
1,067,578	-		DZA65_RS05195	0.43	+0.0
1,067,578	-		DZA65_RS05195	0.43	-1.2
1,067,578	-		DZA65_RS05195	0.43	+0.9
1,067,578	-		DZA65_RS05195	0.43	-1.1
1,067,578	-		DZA65_RS05195	0.43	-0.1
1,067,578	-		DZA65_RS05195	0.43	+1.4
1,067,578	-		DZA65_RS05195	0.43	-0.8
1,067,583	+		DZA65_RS05195	0.43	+0.2
1,067,583	+		DZA65_RS05195	0.43	-0.1
1,067,583	+		DZA65_RS05195	0.43	+0.9
1,067,583	+		DZA65_RS05195	0.43	+1.2
1,067,583	+		DZA65_RS05195	0.43	+0.2
1,067,583	+		DZA65_RS05195	0.43	+0.1
1,067,584	-		DZA65_RS05195	0.43	+1.4
1,067,584	-		DZA65_RS05195	0.43	+0.1
1,067,589	+		DZA65_RS05195	0.44	+1.2
1,067,589	+		DZA65_RS05195	0.44	+0.9
1,067,589	+		DZA65_RS05195	0.44	+0.4
1,067,589	+		DZA65_RS05195	0.44	+0.6
1,067,589	+		DZA65_RS05195	0.44	-0.7
1,067,589	+		DZA65_RS05195	0.44	+1.2
1,067,590	-		DZA65_RS05195	0.44	+0.8
1,067,665	+		DZA65_RS05195	0.50	+0.5
1,067,670	+		DZA65_RS05195	0.51	+0.9
1,067,671	-		DZA65_RS05195	0.51	+0.6
1,067,766	+		DZA65_RS05195	0.59	+0.2
1,067,848	+		DZA65_RS05195	0.65	+0.3
1,067,849	-		DZA65_RS05195	0.65	+0.0
1,067,851	+		DZA65_RS05195	0.66	-0.9
1,067,851	+		DZA65_RS05195	0.66	+0.2
1,067,852	-		DZA65_RS05195	0.66	-1.5
1,067,852	-		DZA65_RS05195	0.66	+0.3
1,067,852	-		DZA65_RS05195	0.66	-0.8
1,067,852	-		DZA65_RS05195	0.66	-0.8
1,067,869	+		DZA65_RS05195	0.67	+0.5
1,067,870	-		DZA65_RS05195	0.67	+0.7
1,067,950	+		DZA65_RS05195	0.74	+0.7
1,067,950	+		DZA65_RS05195	0.74	-0.2
1,067,951	-		DZA65_RS05195	0.74	-0.9
1,067,951	-		DZA65_RS05195	0.74	-0.1
1,067,953	+		DZA65_RS05195	0.74	+1.2
1,067,953	+		DZA65_RS05195	0.74	+1.5
1,067,953	+		DZA65_RS05195	0.74	+0.2
1,067,953	+		DZA65_RS05195	0.74	+1.3
1,067,953	+		DZA65_RS05195	0.74	-0.2
1,067,954	-		DZA65_RS05195	0.74	+0.9
1,067,954	-		DZA65_RS05195	0.74	-0.5
1,067,954	-		DZA65_RS05195	0.74	+0.2
1,067,954	-		DZA65_RS05195	0.74	+0.1
1,067,979	+		DZA65_RS05195	0.76	-1.1
1,067,979	+		DZA65_RS05195	0.76	+0.4
1,067,980	-		DZA65_RS05195	0.76	+0.3
1,067,980	-		DZA65_RS05195	0.76	-1.5
1,068,013	+		DZA65_RS05195	0.79	-0.5
1,068,013	+		DZA65_RS05195	0.79	-0.8
1,068,013	+		DZA65_RS05195	0.79	+0.3
1,068,014	-		DZA65_RS05195	0.79	-0.9
1,068,014	-		DZA65_RS05195	0.79	-0.1
1,068,014	-		DZA65_RS05195	0.79	+0.4
1,068,101	+		DZA65_RS05195	0.86	-0.5
1,068,155	-				-0.2
1,068,172	+				+0.4
1,068,172	+				-1.8
1,068,173	-				-0.3
1,068,173	-				-0.2
1,068,173	-				+1.2
1,068,247	+				-1.7
1,068,247	+				+0.5
1,068,285	-				+0.5
1,068,309	+				-1.1
1,068,332	+				+1.4
1,068,336	+				+0.7
1,068,356	+				+1.7
1,068,436	-				-0.1
1,068,436	-				+0.2
1,068,477	+		DZA65_RS05200	0.12	+0.7
1,068,517	+		DZA65_RS05200	0.16	+0.4
1,068,518	-		DZA65_RS05200	0.16	-0.5
1,068,562	+		DZA65_RS05200	0.21	-0.8
1,068,617	-		DZA65_RS05200	0.27	-0.4
1,068,658	+		DZA65_RS05200	0.32	-1.1
1,068,659	-		DZA65_RS05200	0.32	-1.5
1,068,666	+		DZA65_RS05200	0.33	-0.6
1,068,742	-		DZA65_RS05200	0.41	+0.6
1,068,766	-		DZA65_RS05200	0.44	-0.5
1,068,769	+		DZA65_RS05200	0.44	+1.4
1,068,774	-		DZA65_RS05200	0.45	+0.4
1,068,774	-		DZA65_RS05200	0.45	+0.5
1,068,870	-		DZA65_RS05200	0.56	-1.1
1,068,870	-		DZA65_RS05200	0.56	-0.4
1,068,877	+		DZA65_RS05200	0.56	+0.7
1,068,877	+		DZA65_RS05200	0.56	-0.3
1,068,877	+		DZA65_RS05200	0.56	+0.7
1,068,877	+		DZA65_RS05200	0.56	-0.5
1,068,877	+		DZA65_RS05200	0.56	-1.7
1,068,877	+		DZA65_RS05200	0.56	-0.3
1,068,878	-		DZA65_RS05200	0.56	+1.5
1,068,878	-		DZA65_RS05200	0.56	+0.5
1,068,878	-		DZA65_RS05200	0.56	-0.6
1,068,878	-		DZA65_RS05200	0.56	+0.0
1,068,878	-		DZA65_RS05200	0.56	-1.1
1,068,878	-		DZA65_RS05200	0.56	+0.3
1,068,883	+		DZA65_RS05200	0.57	-2.3
1,068,883	+		DZA65_RS05200	0.57	-0.3
1,068,883	+		DZA65_RS05200	0.57	-0.5
1,068,884	-		DZA65_RS05200	0.57	-0.5
1,068,884	-		DZA65_RS05200	0.57	+1.2
1,068,884	-		DZA65_RS05200	0.57	+0.5
1,068,884	-		DZA65_RS05200	0.57	+1.0
1,068,884	-		DZA65_RS05200	0.57	-0.1
1,068,884	-		DZA65_RS05200	0.57	-1.1
1,068,884	-		DZA65_RS05200	0.57	+1.4
1,068,884	-		DZA65_RS05200	0.57	+0.6
1,068,893	+		DZA65_RS05200	0.58	-0.7
1,068,893	+		DZA65_RS05200	0.58	+0.3
1,068,894	-		DZA65_RS05200	0.58	-0.4
1,068,894	-		DZA65_RS05200	0.58	-0.9
1,068,936	+		DZA65_RS05200	0.63	+1.1
1,068,936	+		DZA65_RS05200	0.63	+1.4
1,068,939	+		DZA65_RS05200	0.63	+0.3
1,068,939	+		DZA65_RS05200	0.63	-0.1
1,069,014	-		DZA65_RS05200	0.72	+0.6
1,069,049	-		DZA65_RS05200	0.76	-1.2
1,069,099	+		DZA65_RS05200	0.81	-0.2
1,069,099	+		DZA65_RS05200	0.81	+0.1
1,069,099	+		DZA65_RS05200	0.81	+1.6
1,069,099	+		DZA65_RS05200	0.81	-0.2
1,069,099	+		DZA65_RS05200	0.81	-1.8
1,069,099	+		DZA65_RS05200	0.81	+0.2
1,069,100	-		DZA65_RS05200	0.81	+0.5
1,069,100	-		DZA65_RS05200	0.81	-1.3
1,069,101	+		DZA65_RS05200	0.81	-0.2
1,069,132	+		DZA65_RS05200	0.85	+0.5
1,069,132	+		DZA65_RS05200	0.85	+0.2
1,069,185	+				-1.6
1,069,198	-				-0.4
1,069,198	-				-1.2
1,069,242	+				-1.7