Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS04965

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,027,817	-				+0.3
1,027,817	-				+0.6
1,027,821	-				+0.5
1,027,835	+				-2.8
1,027,836	-				-1.3
1,027,836	-				+1.5
1,027,836	-				+0.8
1,027,836	-				-1.3
1,027,859	-				-0.8
1,027,880	+				-0.8
1,027,880	+				-0.9
1,027,880	+				-0.7
1,027,881	-				+0.8
1,027,881	-				+1.1
1,027,881	-				-0.8
1,027,881	-				+1.7
1,027,881	-				-0.5
1,028,020	+				-0.7
1,028,020	+				-2.8
1,028,020	+				-1.6
1,028,021	-				+0.6
1,028,021	-				+0.8
1,028,021	-				-0.1
1,028,038	-				+0.3
1,028,088	+				+0.5
1,028,088	+				-2.8
1,028,088	+				-0.0
1,028,088	+				+0.3
1,028,088	+				-1.5
1,028,088	+				-1.8
1,028,089	-				-2.5
1,028,089	-				-1.3
1,028,089	-				-0.8
1,028,089	-				-0.5
1,028,089	-				+0.9
1,028,089	-				-0.7
1,028,102	+				-0.9
1,028,102	+				+0.3
1,028,103	-				-1.0
1,028,103	-				-0.5
1,028,103	-				-1.8
1,028,110	+				-1.8
1,028,111	-				-0.2
1,028,111	-				+0.2
1,028,121	+				-1.1
1,028,121	+				-0.9
1,028,121	+				+0.6
1,028,121	+				-0.3
1,028,130	-				-0.1
1,028,130	-				-0.5
1,028,130	-				+0.5
1,028,136	+				-0.5
1,028,136	+				+0.3
1,028,136	+				+0.7
1,028,143	+				-0.0
1,028,156	+				-0.3
1,028,156	+				-0.1
1,028,157	-				-2.5
1,028,157	-				-0.4
1,028,157	-				-0.1
1,028,186	+				+0.7
1,028,187	-				-0.5
1,028,187	-				+0.9
1,028,267	+		DZA65_RS04965	0.12	-1.1
1,028,267	+		DZA65_RS04965	0.12	-1.0
1,028,268	-		DZA65_RS04965	0.12	-0.3
1,028,268	-		DZA65_RS04965	0.12	+1.5
1,028,333	+		DZA65_RS04965	0.19	+0.5
1,028,333	+		DZA65_RS04965	0.19	-0.8
1,028,333	+		DZA65_RS04965	0.19	+0.2
1,028,333	+		DZA65_RS04965	0.19	-0.8
1,028,334	-		DZA65_RS04965	0.19	-0.8
1,028,334	-		DZA65_RS04965	0.19	+0.5
1,028,344	+		DZA65_RS04965	0.21	-0.3
1,028,344	+		DZA65_RS04965	0.21	-0.1
1,028,388	+		DZA65_RS04965	0.25	+2.3
1,028,388	+		DZA65_RS04965	0.25	-3.3
1,028,388	+		DZA65_RS04965	0.25	+0.5
1,028,389	-		DZA65_RS04965	0.26	-2.9
1,028,389	-		DZA65_RS04965	0.26	-0.8
1,028,389	-		DZA65_RS04965	0.26	-0.3
1,028,481	-		DZA65_RS04965	0.36	-0.5
1,028,528	-		DZA65_RS04965	0.41	-0.5
1,028,616	-		DZA65_RS04965	0.50	-1.7
1,028,624	+		DZA65_RS04965	0.51	-0.5
1,028,625	-		DZA65_RS04965	0.51	-1.1
1,028,626	+		DZA65_RS04965	0.52	-1.1
1,028,626	+		DZA65_RS04965	0.52	+1.7
1,028,626	+		DZA65_RS04965	0.52	+0.0
1,028,626	+		DZA65_RS04965	0.52	-0.5
1,028,627	-		DZA65_RS04965	0.52	-0.5
1,028,627	-		DZA65_RS04965	0.52	+0.1
1,028,627	-		DZA65_RS04965	0.52	-1.1
1,028,627	-		DZA65_RS04965	0.52	-0.5
1,028,690	+		DZA65_RS04965	0.59	-2.6
1,028,690	+		DZA65_RS04965	0.59	-0.6
1,028,691	-		DZA65_RS04965	0.59	-0.9
1,028,691	-		DZA65_RS04965	0.59	+0.3
1,028,691	-		DZA65_RS04965	0.59	+0.1
1,028,803	+		DZA65_RS04965	0.71	-0.1
1,028,804	-		DZA65_RS04965	0.71	+2.3
1,028,838	-		DZA65_RS04965	0.75	+0.5
1,028,944	+		DZA65_RS04965	0.87	-0.9
1,028,945	-		DZA65_RS04965	0.87	-0.2
1,028,953	+		DZA65_RS04965	0.88	-1.1
1,028,953	+		DZA65_RS04965	0.88	-0.5
1,028,954	-		DZA65_RS04965	0.88	-1.1
1,028,954	-		DZA65_RS04965	0.88	+0.5
1,028,954	-		DZA65_RS04965	0.88	+1.7
1,028,954	-		DZA65_RS04965	0.88	+0.1
1,028,954	-		DZA65_RS04965	0.88	+0.1
1,028,954	-		DZA65_RS04965	0.88	-0.3
1,028,962	+		DZA65_RS04965	0.89	-1.5
1,028,962	+		DZA65_RS04965	0.89	-0.1
1,028,962	+		DZA65_RS04965	0.89	+0.3
1,028,962	+		DZA65_RS04965	0.89	+3.7
1,028,962	+		DZA65_RS04965	0.89	+0.0
1,028,963	-		DZA65_RS04965	0.89	-0.1
1,029,050	+				+0.1
1,029,050	+				-1.1
1,029,050	+				-2.3
1,029,050	+				+0.5
1,029,050	+				-1.1
1,029,050	+				-0.2
1,029,063	+				+0.1
1,029,063	+				+0.7
1,029,064	-				-0.2
1,029,064	-				+1.3
1,029,077	-				-1.5
1,029,077	-				+0.2
1,029,104	+				-1.5
1,029,265	+		DZA65_RS04970	0.27	+1.3
1,029,297	-		DZA65_RS04970	0.31	+0.2
1,029,402	+		DZA65_RS04970	0.45	-1.1
1,029,402	+		DZA65_RS04970	0.45	+0.9
1,029,486	+		DZA65_RS04970	0.57	+0.8
1,029,607	+		DZA65_RS04970	0.73	+0.0
1,029,607	+		DZA65_RS04970	0.73	+1.5
1,029,607	+		DZA65_RS04970	0.73	-1.1
1,029,607	+		DZA65_RS04970	0.73	-0.4
1,029,607	+		DZA65_RS04970	0.73	-1.2
1,029,607	+		DZA65_RS04970	0.73	+0.4
1,029,608	-		DZA65_RS04970	0.73	+1.3
1,029,608	-		DZA65_RS04970	0.73	-0.1
1,029,608	-		DZA65_RS04970	0.73	+1.1
1,029,608	-		DZA65_RS04970	0.73	+1.1
1,029,608	-		DZA65_RS04970	0.73	+0.5
1,029,608	-		DZA65_RS04970	0.73	-0.9
1,029,608	-		DZA65_RS04970	0.73	-1.1
1,029,608	-		DZA65_RS04970	0.73	-0.6
1,029,641	+		DZA65_RS04970	0.78	+0.1
1,029,641	+		DZA65_RS04970	0.78	+0.9
1,029,641	+		DZA65_RS04970	0.78	+0.9
1,029,642	-		DZA65_RS04970	0.78	-1.3
1,029,642	-		DZA65_RS04970	0.78	+0.3
1,029,642	-		DZA65_RS04970	0.78	-0.3
1,029,642	-		DZA65_RS04970	0.78	+0.4
1,029,642	-		DZA65_RS04970	0.78	+0.2
1,029,642	-		DZA65_RS04970	0.78	+0.3
1,029,642	-		DZA65_RS04970	0.78	+0.2
1,029,642	-		DZA65_RS04970	0.78	-0.5
1,029,642	-		DZA65_RS04970	0.78	+1.7
1,029,645	+		DZA65_RS04970	0.78	+0.1
1,029,645	+		DZA65_RS04970	0.78	+0.1
1,029,645	+		DZA65_RS04970	0.78	-1.1
1,029,645	+		DZA65_RS04970	0.78	+2.1
1,029,645	+		DZA65_RS04970	0.78	-0.1
1,029,646	-		DZA65_RS04970	0.78	+1.1
1,029,646	-		DZA65_RS04970	0.78	+0.2
1,029,646	-		DZA65_RS04970	0.78	+1.0
1,029,646	-		DZA65_RS04970	0.78	+1.0
1,029,646	-		DZA65_RS04970	0.78	-0.2
1,029,646	-		DZA65_RS04970	0.78	-1.1
1,029,646	-		DZA65_RS04970	0.78	+0.3
1,029,733	+				-0.5
1,029,802	+				+0.2
1,029,802	+				-2.1
1,029,803	-				+1.3
1,029,805	+				+0.7
1,029,805	+				+0.8
1,029,805	+				-0.7
1,029,805	+				-0.2
1,029,806	-				-1.1
1,029,834	-				-0.1
1,029,873	-		DZA65_RS04975	0.15	-1.2
1,029,886	-		DZA65_RS04975	0.17	+0.5
1,029,930	+		DZA65_RS04975	0.24	+1.0
1,029,931	-		DZA65_RS04975	0.25	-1.3
1,029,980	-		DZA65_RS04975	0.33	+0.6
1,030,026	+		DZA65_RS04975	0.41	+0.9
1,030,027	-		DZA65_RS04975	0.41	+0.7
1,030,027	-		DZA65_RS04975	0.41	-1.5
1,030,027	-		DZA65_RS04975	0.41	-0.1