Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20590

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,440,357	+		DZA65_RS20580	0.43	-0.3
4,440,357	+		DZA65_RS20580	0.43	+0.4
4,440,357	+		DZA65_RS20580	0.43	+1.5
4,440,357	+		DZA65_RS20580	0.43	-0.0
4,440,357	+		DZA65_RS20580	0.43	-1.6
4,440,358	-		DZA65_RS20580	0.43	+0.7
4,440,358	-		DZA65_RS20580	0.43	+2.0
4,440,358	-		DZA65_RS20580	0.43	-1.9
4,440,358	-		DZA65_RS20580	0.43	-0.1
4,440,358	-		DZA65_RS20580	0.43	+0.0
4,440,358	-		DZA65_RS20580	0.43	+0.2
4,440,358	-		DZA65_RS20580	0.43	+1.1
4,440,358	-		DZA65_RS20580	0.43	-0.1
4,440,361	+		DZA65_RS20580	0.43	+0.1
4,440,361	+		DZA65_RS20580	0.43	-0.2
4,440,361	+		DZA65_RS20580	0.43	+1.3
4,440,361	+		DZA65_RS20580	0.43	+0.6
4,440,362	-		DZA65_RS20580	0.43	-0.3
4,440,362	-		DZA65_RS20580	0.43	+1.5
4,440,368	+		DZA65_RS20580	0.44	-1.6
4,440,368	+		DZA65_RS20580	0.44	-0.9
4,440,368	+		DZA65_RS20580	0.44	+0.2
4,440,368	+		DZA65_RS20580	0.44	-1.0
4,440,369	-		DZA65_RS20580	0.44	+1.2
4,440,369	-		DZA65_RS20580	0.44	-0.4
4,440,411	+		DZA65_RS20580	0.49	+0.0
4,440,412	-		DZA65_RS20580	0.49	-1.3
4,440,438	+		DZA65_RS20580	0.52	-2.4
4,440,453	+		DZA65_RS20580	0.54	+1.1
4,440,641	+		DZA65_RS20580	0.76	-1.4
4,440,642	-		DZA65_RS20580	0.76	+1.3
4,440,642	-		DZA65_RS20580	0.76	-1.9
4,440,642	-		DZA65_RS20580	0.76	-0.4
4,440,668	+		DZA65_RS20580	0.79	+0.1
4,440,668	+		DZA65_RS20580	0.79	-0.3
4,440,669	-		DZA65_RS20580	0.79	-1.7
4,440,769	+				-0.3
4,440,770	-				+0.4
4,440,770	-				-0.1
4,440,770	-				+0.5
4,440,770	-				-0.4
4,440,810	+				-0.9
4,440,811	-				+0.1
4,440,811	-				+1.0
4,440,811	-				+0.2
4,440,834	+				-0.9
4,440,890	+				-0.5
4,440,891	-				+0.1
4,440,904	+				+0.2
4,440,904	+				+0.9
4,440,904	+				+0.9
4,440,905	-				+0.0
4,440,905	-				+0.5
4,440,905	-				+0.6
4,440,907	+				+0.5
4,440,907	+				-0.6
4,440,907	+				+1.5
4,440,907	+				-0.4
4,440,907	+				-0.4
4,440,907	+				+2.0
4,440,907	+				-0.3
4,440,907	+				+0.9
4,440,907	+				-0.5
4,440,907	+				-0.3
4,440,908	-				-0.6
4,440,908	-				-2.0
4,440,908	-				+0.3
4,440,908	-				-0.2
4,440,908	-				-0.0
4,440,908	-				+1.7
4,440,908	-				-0.0
4,440,908	-				-1.4
4,440,908	-				+0.6
4,440,908	-				+1.2
4,440,908	-				+0.7
4,440,908	-				-0.0
4,440,908	-				-0.3
4,440,908	-				-0.4
4,440,908	-				+0.5
4,440,908	-				+0.7
4,440,908	-				-1.9
4,440,908	-				-0.8
4,440,908	-				+0.4
4,440,908	-				-1.1
4,440,908	-				-0.4
4,440,909	+				-0.0
4,440,909	+				-0.1
4,440,910	-				+0.7
4,440,910	-				+1.1
4,440,910	-				+0.1
4,440,910	-				-2.0
4,440,930	+				+0.7
4,440,930	+				-1.6
4,440,930	+				+0.4
4,440,930	+				+1.7
4,440,930	+				-0.5
4,440,930	+				-0.1
4,440,930	+				+2.1
4,440,930	+				-1.6
4,440,930	+				-0.0
4,440,930	+				-1.5
4,440,931	-				+0.7
4,440,931	-				+0.2
4,440,931	-				-1.6
4,440,931	-				+1.2
4,440,931	-				+1.4
4,440,931	-				+0.4
4,440,931	-				+1.1
4,440,931	-				-0.3
4,440,969	+				+1.1
4,440,969	+				-0.4
4,440,980	-				+1.6
4,440,980	-				+1.1
4,441,002	-				-0.3
4,441,005	-				-0.4
4,441,005	-				-1.9
4,441,274	+				+0.3
4,441,275	-				-0.0
4,441,277	+				+1.1
4,441,277	+				+0.6
4,441,278	-				+1.1
4,441,278	-				-0.5
4,441,278	-				+0.4
4,441,278	-				-0.4
4,441,286	+				-1.6
4,441,302	+				-0.4
4,441,302	+				+0.3
4,441,302	+				-0.3
4,441,303	-				-1.1
4,441,338	+				+0.7
4,441,338	+				+0.0
4,441,345	+				+0.7
4,441,413	+				+0.3
4,441,414	-				+1.1
4,441,446	-		DZA65_RS20590	0.10	-0.7
4,441,446	-		DZA65_RS20590	0.10	-2.3
4,441,464	+		DZA65_RS20590	0.12	+2.0
4,441,464	+		DZA65_RS20590	0.12	+1.1
4,441,464	+		DZA65_RS20590	0.12	+1.1
4,441,464	+		DZA65_RS20590	0.12	-0.6
4,441,464	+		DZA65_RS20590	0.12	-0.6
4,441,465	-		DZA65_RS20590	0.12	+0.8
4,441,556	+		DZA65_RS20590	0.21	-0.0
4,441,574	+		DZA65_RS20590	0.23	-1.0
4,441,575	-		DZA65_RS20590	0.23	+0.1
4,441,575	-		DZA65_RS20590	0.23	+0.5
4,441,779	+		DZA65_RS20590	0.42	-1.0
4,441,780	-		DZA65_RS20590	0.42	+0.4
4,441,780	-		DZA65_RS20590	0.42	-0.8
4,442,036	+		DZA65_RS20590	0.67	+0.2
4,442,036	+		DZA65_RS20590	0.67	-0.9
4,442,036	+		DZA65_RS20590	0.67	+1.1
4,442,036	+		DZA65_RS20590	0.67	-0.2
4,442,036	+		DZA65_RS20590	0.67	-0.1
4,442,036	+		DZA65_RS20590	0.67	-0.1
4,442,036	+		DZA65_RS20590	0.67	+0.5
4,442,037	-		DZA65_RS20590	0.67	-1.4
4,442,037	-		DZA65_RS20590	0.67	-1.4
4,442,037	-		DZA65_RS20590	0.67	+1.4
4,442,082	+		DZA65_RS20590	0.71	-0.4
4,442,082	+		DZA65_RS20590	0.71	+2.0
4,442,082	+		DZA65_RS20590	0.71	-0.6
4,442,082	+		DZA65_RS20590	0.71	-0.3
4,442,082	+		DZA65_RS20590	0.71	+1.8
4,442,082	+		DZA65_RS20590	0.71	-1.1
4,442,082	+		DZA65_RS20590	0.71	+1.7
4,442,082	+		DZA65_RS20590	0.71	+3.1
4,442,082	+		DZA65_RS20590	0.71	+1.4
4,442,082	+		DZA65_RS20590	0.71	+1.7
4,442,083	-		DZA65_RS20590	0.71	+0.4
4,442,083	-		DZA65_RS20590	0.71	+0.1
4,442,083	-		DZA65_RS20590	0.71	-0.1
4,442,083	-		DZA65_RS20590	0.71	-0.0
4,442,087	+		DZA65_RS20590	0.72	-1.7
4,442,087	+		DZA65_RS20590	0.72	-0.2
4,442,087	+		DZA65_RS20590	0.72	+1.9
4,442,088	-		DZA65_RS20590	0.72	+1.0
4,442,125	-		DZA65_RS20590	0.75	+0.3
4,442,184	+		DZA65_RS20590	0.81	-0.5
4,442,184	+		DZA65_RS20590	0.81	+1.4
4,442,184	+		DZA65_RS20590	0.81	+0.5
4,442,184	+		DZA65_RS20590	0.81	-0.7
4,442,184	+		DZA65_RS20590	0.81	+0.1
4,442,185	-		DZA65_RS20590	0.81	+1.0
4,442,185	-		DZA65_RS20590	0.81	-2.1
4,442,185	-		DZA65_RS20590	0.81	+0.2
4,442,243	-		DZA65_RS20590	0.87	-0.5
4,442,254	+		DZA65_RS20590	0.88	-0.2
4,442,254	+		DZA65_RS20590	0.88	+1.1
4,442,254	+		DZA65_RS20590	0.88	+0.5
4,442,254	+		DZA65_RS20590	0.88	-2.1
4,442,254	+		DZA65_RS20590	0.88	+0.8
4,442,255	-		DZA65_RS20590	0.88	+0.3
4,442,255	-		DZA65_RS20590	0.88	+0.3
4,442,255	-		DZA65_RS20590	0.88	-0.9
4,442,255	-		DZA65_RS20590	0.88	+0.5
4,442,255	-		DZA65_RS20590	0.88	+1.1
4,442,255	-		DZA65_RS20590	0.88	+0.4
4,442,255	-		DZA65_RS20590	0.88	+0.6
4,442,255	-		DZA65_RS20590	0.88	-1.6
4,442,404	+				-0.6
4,442,404	+				-1.1
4,442,405	-				+0.3
4,442,405	-				+1.2
4,442,405	-				-0.3
4,442,405	-				-0.0
4,442,452	+				+0.9
4,442,452	+				-0.1
4,442,564	+				+1.1
4,442,564	+				-0.1
4,442,564	+				-2.1
4,442,565	-				+0.3
4,442,732	+		DZA65_RS20595	0.20	-0.1
4,442,816	+		DZA65_RS20595	0.28	-1.0
4,442,817	-		DZA65_RS20595	0.28	+0.5
4,442,817	-		DZA65_RS20595	0.28	-1.4
4,442,823	+		DZA65_RS20595	0.29	-1.3
4,442,823	+		DZA65_RS20595	0.29	-0.9
4,442,824	-		DZA65_RS20595	0.29	+0.7
4,442,824	-		DZA65_RS20595	0.29	+1.6
4,442,824	-		DZA65_RS20595	0.29	+0.1
4,442,913	-		DZA65_RS20595	0.38	+1.5
4,442,913	-		DZA65_RS20595	0.38	+1.2
4,442,934	-		DZA65_RS20595	0.40	-1.6
4,442,953	+		DZA65_RS20595	0.41	+0.7
4,442,953	+		DZA65_RS20595	0.41	-2.3
4,442,954	-		DZA65_RS20595	0.42	+2.3
4,442,954	-		DZA65_RS20595	0.42	+0.3
4,443,286	-		DZA65_RS20595	0.74	+1.5
4,443,286	-		DZA65_RS20595	0.74	+0.2
4,443,350	+		DZA65_RS20595	0.80	+0.1