Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20525

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,428,970	+				+0.1
4,428,970	+				-0.6
4,429,057	+				+0.0
4,429,058	-				-1.0
4,429,058	-				-0.0
4,429,079	+		DZA65_RS20515	0.11	-0.2
4,429,079	+		DZA65_RS20515	0.11	+0.7
4,429,079	+		DZA65_RS20515	0.11	-0.4
4,429,080	-		DZA65_RS20515	0.11	-0.1
4,429,080	-		DZA65_RS20515	0.11	+0.7
4,429,080	-		DZA65_RS20515	0.11	+1.0
4,429,112	+		DZA65_RS20515	0.18	-2.3
4,429,113	-		DZA65_RS20515	0.18	-0.3
4,429,113	-		DZA65_RS20515	0.18	-0.3
4,429,113	-		DZA65_RS20515	0.18	+1.7
4,429,162	+				+3.5
4,429,162	+		DZA65_RS20515	0.28	-0.5
4,429,162	+		DZA65_RS20515	0.28	+0.1
4,429,163	-		DZA65_RS20515	0.28	+1.0
4,429,163	-		DZA65_RS20515	0.28	-0.3
4,429,163	-		DZA65_RS20515	0.28	-0.2
4,429,163	-		DZA65_RS20515	0.28	-2.3
4,429,163	-		DZA65_RS20515	0.28	-0.9
4,429,184	-		DZA65_RS20515	0.33	+0.3
4,429,200	+		DZA65_RS20515	0.36	+0.2
4,429,200	+		DZA65_RS20515	0.36	-0.5
4,429,201	-		DZA65_RS20515	0.36	+0.7
4,429,295	+		DZA65_RS20515	0.56	+0.5
4,429,301	+		DZA65_RS20515	0.57	+0.1
4,429,301	+		DZA65_RS20515	0.57	-0.6
4,429,314	+		DZA65_RS20515	0.60	-0.4
4,429,314	+		DZA65_RS20515	0.60	+1.1
4,429,314	+		DZA65_RS20515	0.60	+0.1
4,429,314	+		DZA65_RS20515	0.60	+0.1
4,429,315	-		DZA65_RS20515	0.60	+0.9
4,429,315	-		DZA65_RS20515	0.60	+0.9
4,429,315	-		DZA65_RS20515	0.60	+0.6
4,429,315	-		DZA65_RS20515	0.60	+0.3
4,429,315	-		DZA65_RS20515	0.60	-1.5
4,429,319	+		DZA65_RS20515	0.61	-0.9
4,429,319	+		DZA65_RS20515	0.61	+2.2
4,429,328	+		DZA65_RS20515	0.63	+0.7
4,429,328	+		DZA65_RS20515	0.63	+1.4
4,429,328	+		DZA65_RS20515	0.63	-0.2
4,429,330	+		DZA65_RS20515	0.64	-1.9
4,429,330	+		DZA65_RS20515	0.64	-0.3
4,429,330	+		DZA65_RS20515	0.64	-0.7
4,429,330	+		DZA65_RS20515	0.64	-0.6
4,429,331	-		DZA65_RS20515	0.64	-0.1
4,429,331	-		DZA65_RS20515	0.64	-0.2
4,429,369	+		DZA65_RS20515	0.72	-0.0
4,429,369	+		DZA65_RS20515	0.72	+1.7
4,429,369	+		DZA65_RS20515	0.72	+0.7
4,429,369	+		DZA65_RS20515	0.72	+0.0
4,429,369	+		DZA65_RS20515	0.72	+0.4
4,429,370	-		DZA65_RS20515	0.72	-0.3
4,429,370	-		DZA65_RS20515	0.72	-0.2
4,429,370	-		DZA65_RS20515	0.72	-0.9
4,429,370	-		DZA65_RS20515	0.72	+0.4
4,429,382	+		DZA65_RS20515	0.74	+1.3
4,429,383	-		DZA65_RS20515	0.75	-0.3
4,429,430	-		DZA65_RS20515	0.85	+0.3
4,429,478	+				+0.7
4,429,478	+				-1.1
4,429,479	-				-1.1
4,429,479	-				+1.0
4,429,536	+				-0.5
4,429,537	-				+0.2
4,429,571	+				+0.3
4,429,578	+				+0.3
4,429,578	+				+0.7
4,429,579	-				+0.7
4,429,579	-				-0.3
4,429,588	+				-0.9
4,429,651	+		DZA65_RS20520	0.38	-0.7
4,429,651	+		DZA65_RS20520	0.38	-0.1
4,429,651	+		DZA65_RS20520	0.38	-0.8
4,429,651	+		DZA65_RS20520	0.38	-0.2
4,429,651	+		DZA65_RS20520	0.38	-1.0
4,429,652	-		DZA65_RS20520	0.38	-0.7
4,429,673	+		DZA65_RS20520	0.49	-0.2
4,429,767	+				+0.1
4,429,767	+				+0.4
4,429,767	+				-0.3
4,429,767	+				+0.1
4,429,767	+				+0.3
4,429,767	+				+0.2
4,429,767	+				+3.3
4,429,767	+				-1.3
4,429,767	+				-0.5
4,429,767	+				-0.5
4,429,767	+				+1.2
4,429,767	+				-1.0
4,429,767	+				-0.4
4,429,767	+				-0.9
4,429,767	+				+0.7
4,429,767	+				+0.5
4,429,767	+				-0.4
4,429,767	+				+0.7
4,429,767	+				+0.4
4,429,767	+				+0.7
4,429,767	+				-0.9
4,429,767	+				-1.2
4,429,767	+				+2.6
4,429,767	+				+0.2
4,429,767	+				-1.2
4,429,767	+				+1.2
4,429,767	+				+0.1
4,429,767	+				-1.4
4,429,767	+				+0.1
4,429,767	+				+0.7
4,429,767	+				-1.3
4,429,767	+				-0.7
4,429,767	+				+1.0
4,429,767	+				+1.9
4,429,767	+				+0.5
4,429,767	+				+1.1
4,429,767	+				+1.0
4,429,767	+				-0.0
4,429,767	+				+0.9
4,429,767	+				+1.5
4,429,767	+				-1.3
4,429,767	+				-0.0
4,429,767	+				+1.7
4,429,767	+				+3.8
4,429,767	+				+0.4
4,429,767	+				+0.4
4,429,767	+				+0.4
4,429,767	+				-2.3
4,429,767	+				-0.4
4,429,767	+				-1.6
4,429,767	+				-1.1
4,429,767	+				-0.1
4,429,767	+				+0.3
4,429,767	+				-0.1
4,429,767	+				-1.3
4,429,767	+				+0.4
4,429,767	+				+0.1
4,429,767	+				-0.5
4,429,767	+				+0.2
4,429,767	+				+0.1
4,429,767	+				-0.0
4,429,767	+				+0.7
4,429,767	+				-0.0
4,429,767	+				+0.3
4,429,767	+				-0.7
4,429,767	+				-0.7
4,429,767	+				+0.4
4,429,767	+				+1.0
4,429,768	-				-1.3
4,429,768	-				-0.2
4,429,768	-				-2.1
4,429,768	-				+1.2
4,429,768	-				-0.7
4,429,768	-				+0.9
4,429,768	-				+0.8
4,429,768	-				+1.7
4,429,768	-				-0.1
4,429,768	-				+0.7
4,429,768	-				-2.7
4,429,768	-				-1.1
4,429,768	-				+0.0
4,429,768	-				+1.1
4,429,768	-				-0.6
4,429,768	-				-0.3
4,429,768	-				-0.4
4,429,768	-				-0.0
4,429,768	-				+0.3
4,429,768	-				-1.1
4,429,768	-				-1.0
4,429,768	-				-0.9
4,429,768	-				-0.3
4,429,768	-				-0.2
4,429,768	-				-0.6
4,429,768	-				+0.0
4,429,768	-				-0.9
4,429,768	-				+0.7
4,429,768	-				-0.3
4,429,768	-				+0.0
4,429,768	-				+1.4
4,429,768	-				-0.1
4,429,768	-				-0.4
4,429,768	-				+0.7
4,429,768	-				-0.0
4,429,768	-				-2.1
4,429,768	-				+0.1
4,429,768	-				+0.5
4,429,768	-				+1.7
4,429,768	-				-1.4
4,429,768	-				-1.3
4,429,768	-				+1.3
4,429,768	-				+0.6
4,429,768	-				+2.1
4,429,768	-				-0.3
4,429,768	-				-1.1
4,429,768	-				+1.1
4,429,771	+				+0.7
4,429,771	+				+1.0
4,429,772	-				-0.9
4,429,772	-				+0.7
4,429,772	-				+1.1
4,429,772	-				+0.5
4,429,772	-				+0.2
4,429,779	+				-0.2
4,429,852	-				+1.2
4,429,852	-				-0.7
4,429,870	+				-0.5
4,429,886	+				-0.9
4,429,886	+				-1.9
4,429,886	+				+0.1
4,429,886	+				-0.7
4,429,887	-				-2.3
4,429,887	-				-0.7
4,429,887	-				+0.7
4,429,933	-				+0.1
4,430,821	+		DZA65_RS20525	0.78	+0.7
4,431,153	+				-0.5