Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18350

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,957,157	+				+0.8
3,957,158	-				+0.1
3,957,248	+				-1.6
3,957,249	-				+0.5
3,957,265	+				+0.1
3,957,266	-				-1.0
3,957,266	-				-0.1
3,957,266	-				+1.0
3,957,348	+		DZA65_RS18345	0.14	-2.0
3,957,349	-		DZA65_RS18345	0.14	+0.5
3,957,349	-		DZA65_RS18345	0.14	-1.0
3,957,362	+		DZA65_RS18345	0.16	-0.0
3,957,362	+		DZA65_RS18345	0.16	+0.8
3,957,362	+		DZA65_RS18345	0.16	-1.0
3,957,363	-		DZA65_RS18345	0.16	+0.2
3,957,363	-		DZA65_RS18345	0.16	+1.7
3,957,363	-		DZA65_RS18345	0.16	-0.2
3,957,364	+		DZA65_RS18345	0.16	-0.5
3,957,364	+		DZA65_RS18345	0.16	+0.8
3,957,364	+		DZA65_RS18345	0.16	-1.7
3,957,364	+		DZA65_RS18345	0.16	-2.3
3,957,364	+		DZA65_RS18345	0.16	+1.5
3,957,364	+		DZA65_RS18345	0.16	+0.1
3,957,364	+		DZA65_RS18345	0.16	+1.0
3,957,364	+		DZA65_RS18345	0.16	+1.2
3,957,364	+		DZA65_RS18345	0.16	-0.6
3,957,364	+		DZA65_RS18345	0.16	+0.2
3,957,364	+		DZA65_RS18345	0.16	-1.2
3,957,365	-		DZA65_RS18345	0.16	+2.5
3,957,365	-		DZA65_RS18345	0.16	+0.3
3,957,365	-		DZA65_RS18345	0.16	+0.5
3,957,365	-		DZA65_RS18345	0.16	-0.5
3,957,365	-		DZA65_RS18345	0.16	+0.0
3,957,365	-		DZA65_RS18345	0.16	-0.0
3,957,505	+		DZA65_RS18345	0.39	+0.5
3,957,505	+		DZA65_RS18345	0.39	-1.0
3,957,506	-		DZA65_RS18345	0.39	+2.5
3,957,711	+		DZA65_RS18345	0.72	+3.1
3,957,711	+		DZA65_RS18345	0.72	-2.0
3,957,711	+		DZA65_RS18345	0.72	+0.5
3,957,711	+		DZA65_RS18345	0.72	-0.4
3,957,712	-		DZA65_RS18345	0.72	-1.0
3,957,841	+				-0.7
3,957,842	-				+1.5
3,957,868	+				-1.3
3,957,869	-				-2.0
3,957,869	-				-0.2
3,957,869	-				+0.9
3,957,869	-				-0.0
3,957,896	+				-0.7
3,957,903	+				+1.9
3,957,904	-				+0.8
3,957,904	-				-0.7
3,957,904	-				+0.4
3,957,908	+				-2.0
3,957,923	+				+1.9
3,957,923	+				-0.5
3,957,923	+				-2.3
3,957,923	+				-0.1
3,957,923	+				-0.2
3,957,924	-				+0.4
3,957,924	-				-0.6
3,958,036	+				-0.4
3,958,036	+				-0.5
3,958,036	+				-0.0
3,958,036	+				+0.5
3,958,036	+				+0.2
3,958,036	+				-0.5
3,958,037	-				+0.2
3,958,037	-				+1.0
3,958,037	-				+0.5
3,958,037	-				-1.6
3,958,037	-				+0.5
3,958,037	-				+0.5
3,958,037	-				+0.8
3,958,037	-				-0.0
3,958,037	-				-1.8
3,958,037	-				-1.0
3,958,065	-				-0.0
3,958,065	-				+1.4
3,958,066	+				-0.4
3,958,066	+				+1.2
3,958,066	+				+0.5
3,958,066	+				-0.2
3,958,066	+				-0.1
3,958,066	+				-1.0
3,958,066	+				+1.1
3,958,066	+				-0.0
3,958,066	+				-1.6
3,958,067	-				+0.2
3,958,067	-				-0.8
3,958,067	-				-0.1
3,958,067	-				+0.1
3,958,067	-				-0.5
3,958,067	-				-0.5
3,958,067	-				-0.3
3,958,070	+				+1.2
3,958,070	+				+0.9
3,958,070	+				+0.5
3,958,070	+				-0.6
3,958,071	-				+0.7
3,958,071	-				-0.5
3,958,071	-				+1.8
3,958,071	-				+1.3
3,958,071	-				-0.6
3,958,071	-				+0.0
3,958,087	+				-0.2
3,958,087	+				-0.6
3,958,087	+				+0.5
3,958,089	+				-0.0
3,958,089	+				-0.2
3,958,089	+				-0.9
3,958,089	+				+1.9
3,958,089	+				-0.9
3,958,089	+				-0.7
3,958,089	+				-0.0
3,958,090	-				+0.2
3,958,090	-				+0.7
3,958,090	-				+0.2
3,958,090	-				-0.5
3,958,090	-				+0.9
3,958,090	-				-0.8
3,958,097	+				+0.8
3,958,097	+				-0.5
3,958,098	-				-0.2
3,958,098	-				-1.3
3,958,098	-				-2.0
3,958,098	-				-1.3
3,958,164	-				-3.2
3,958,258	-		DZA65_RS18350	0.21	-1.8
3,958,298	+		DZA65_RS18350	0.26	+0.1
3,958,299	-		DZA65_RS18350	0.27	-0.1
3,958,360	+		DZA65_RS18350	0.35	+0.8
3,958,361	-		DZA65_RS18350	0.35	-0.1
3,958,377	+		DZA65_RS18350	0.38	-0.4
3,958,378	-		DZA65_RS18350	0.38	-0.8
3,958,378	-		DZA65_RS18350	0.38	-1.5
3,958,378	-		DZA65_RS18350	0.38	-0.9
3,958,378	-		DZA65_RS18350	0.38	+0.8
3,958,490	+		DZA65_RS18350	0.54	+0.8
3,958,577	+		DZA65_RS18350	0.66	+0.4
3,958,604	+		DZA65_RS18350	0.70	-0.6
3,958,604	+		DZA65_RS18350	0.70	-0.6
3,958,709	+		DZA65_RS18350	0.84	-0.1
3,958,709	+		DZA65_RS18350	0.84	-0.5
3,958,710	-		DZA65_RS18350	0.85	-0.6
3,958,710	-		DZA65_RS18350	0.85	+0.8
3,958,719	+		DZA65_RS18350	0.86	-0.1
3,958,728	+		DZA65_RS18350	0.87	-0.7
3,958,728	+		DZA65_RS18350	0.87	-0.5
3,958,728	+		DZA65_RS18350	0.87	-0.8
3,958,728	+		DZA65_RS18350	0.87	-2.0
3,958,729	-		DZA65_RS18350	0.87	+0.9
3,958,729	-		DZA65_RS18350	0.87	-2.9
3,958,832	+				+0.5
3,958,832	+				+0.9
3,958,833	-				+1.3
3,958,833	-				-1.5
3,958,833	-				-1.5
3,958,833	-				+2.1
3,958,833	-				+0.9
3,958,887	+		DZA65_RS18355	0.23	-0.1
3,958,887	+		DZA65_RS18355	0.23	-0.5
3,958,887	+		DZA65_RS18355	0.23	-0.4
3,958,888	-		DZA65_RS18355	0.23	-2.3
3,958,888	-		DZA65_RS18355	0.23	+1.7
3,958,888	-		DZA65_RS18355	0.23	+1.0
3,958,919	+		DZA65_RS18355	0.31	+1.5
3,958,920	-		DZA65_RS18355	0.31	-0.8
3,958,968	+		DZA65_RS18355	0.44	+1.5
3,958,968	+		DZA65_RS18355	0.44	-1.2
3,958,968	+		DZA65_RS18355	0.44	+0.7
3,958,968	+		DZA65_RS18355	0.44	-1.1
3,958,969	-		DZA65_RS18355	0.45	+0.5
3,958,969	-		DZA65_RS18355	0.45	+0.1
3,958,969	-		DZA65_RS18355	0.45	-0.5
3,958,969	-		DZA65_RS18355	0.45	-0.5
3,958,969	-		DZA65_RS18355	0.45	-0.5
3,959,021	+		DZA65_RS18355	0.58	-0.7
3,959,022	-		DZA65_RS18355	0.59	-0.9
3,959,047	+		DZA65_RS18355	0.65	-0.3
3,959,048	-		DZA65_RS18355	0.66	-0.5
3,959,048	-		DZA65_RS18355	0.66	+0.9
3,959,145	+				+0.2
3,959,145	+				+1.9
3,959,146	-				-0.8
3,959,146	-				-0.5
3,959,146	-				+0.7
3,959,146	-				-0.0
3,959,146	-				-0.6
3,959,146	-				-0.3
3,959,193	+				+0.2
3,959,194	-				+1.3
3,959,196	+				+0.9
3,959,196	+				-0.0
3,959,196	+				+1.5
3,959,196	+				-1.8
3,959,196	+				+0.1
3,959,196	+				+0.1
3,959,197	-				-0.5
3,959,197	-				-0.5
3,959,197	-				+1.7
3,959,211	+				+0.7
3,959,212	-				-0.5
3,959,212	-				+0.7
3,959,212	-				+1.2
3,959,212	-				-0.6
3,959,212	-				+0.7
3,959,230	+				+0.9
3,959,230	+				+0.1
3,959,230	+				-0.1
3,959,231	-				+0.3
3,959,231	-				-0.2
3,959,231	-				+0.1
3,959,231	-				+0.2
3,959,495	+				+0.5