Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17550

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,781,435	+		DZA65_RS17545	0.63	-0.8
3,781,436	-		DZA65_RS17545	0.63	-0.1
3,781,595	+		DZA65_RS17545	0.71	-0.8
3,781,595	+		DZA65_RS17545	0.71	-0.1
3,781,596	-		DZA65_RS17545	0.71	+0.2
3,781,596	-		DZA65_RS17545	0.71	-1.0
3,781,596	-		DZA65_RS17545	0.71	+1.2
3,781,596	-		DZA65_RS17545	0.71	+1.1
3,781,597	+		DZA65_RS17545	0.71	+0.2
3,781,597	+		DZA65_RS17545	0.71	+0.2
3,781,597	+		DZA65_RS17545	0.71	-0.0
3,781,597	+		DZA65_RS17545	0.71	+0.4
3,781,597	+		DZA65_RS17545	0.71	+1.6
3,781,597	+		DZA65_RS17545	0.71	+0.2
3,781,597	+		DZA65_RS17545	0.71	+0.5
3,781,597	+		DZA65_RS17545	0.71	+1.2
3,781,597	+		DZA65_RS17545	0.71	-1.0
3,781,597	+		DZA65_RS17545	0.71	+0.5
3,781,597	+		DZA65_RS17545	0.71	-0.3
3,781,597	+		DZA65_RS17545	0.71	+0.5
3,781,597	+		DZA65_RS17545	0.71	-0.5
3,781,597	+		DZA65_RS17545	0.71	-0.2
3,781,597	+		DZA65_RS17545	0.71	-0.8
3,781,597	+		DZA65_RS17545	0.71	+0.1
3,781,597	+		DZA65_RS17545	0.71	-0.3
3,781,597	+		DZA65_RS17545	0.71	-0.7
3,781,597	+		DZA65_RS17545	0.71	-0.7
3,781,597	+		DZA65_RS17545	0.71	+0.5
3,781,597	+		DZA65_RS17545	0.71	-1.1
3,781,597	+		DZA65_RS17545	0.71	-0.8
3,781,597	+		DZA65_RS17545	0.71	+0.7
3,781,597	+		DZA65_RS17545	0.71	+0.5
3,781,598	-		DZA65_RS17545	0.71	-0.1
3,781,598	-		DZA65_RS17545	0.71	+0.1
3,781,598	-		DZA65_RS17545	0.71	-2.1
3,781,598	-		DZA65_RS17545	0.71	+0.6
3,781,598	-		DZA65_RS17545	0.71	+0.8
3,781,598	-		DZA65_RS17545	0.71	-0.3
3,781,598	-		DZA65_RS17545	0.71	+0.2
3,781,598	-		DZA65_RS17545	0.71	-0.2
3,781,598	-		DZA65_RS17545	0.71	-0.0
3,781,598	-		DZA65_RS17545	0.71	-1.4
3,781,598	-		DZA65_RS17545	0.71	-1.3
3,781,598	-		DZA65_RS17545	0.71	+0.5
3,781,598	-		DZA65_RS17545	0.71	-0.4
3,781,598	-		DZA65_RS17545	0.71	-0.9
3,781,598	-		DZA65_RS17545	0.71	+0.0
3,781,598	-		DZA65_RS17545	0.71	+2.5
3,781,598	-		DZA65_RS17545	0.71	-0.7
3,781,598	-		DZA65_RS17545	0.71	+2.3
3,781,598	-		DZA65_RS17545	0.71	-0.1
3,781,598	-		DZA65_RS17545	0.71	-1.2
3,781,598	-		DZA65_RS17545	0.71	+0.8
3,781,598	-		DZA65_RS17545	0.71	+0.7
3,781,598	-		DZA65_RS17545	0.71	+0.1
3,781,598	-		DZA65_RS17545	0.71	+0.4
3,781,598	-		DZA65_RS17545	0.71	-0.4
3,781,598	-		DZA65_RS17545	0.71	-0.4
3,781,598	-		DZA65_RS17545	0.71	+1.2
3,781,598	-		DZA65_RS17545	0.71	+0.2
3,781,598	-		DZA65_RS17545	0.71	-2.1
3,781,598	-		DZA65_RS17545	0.71	+0.5
3,781,598	-		DZA65_RS17545	0.71	+2.6
3,781,598	-		DZA65_RS17545	0.71	-0.7
3,781,598	-		DZA65_RS17545	0.71	+0.5
3,781,598	-		DZA65_RS17545	0.71	+0.1
3,781,607	+		DZA65_RS17545	0.71	+0.5
3,781,608	-		DZA65_RS17545	0.71	+2.3
3,781,608	-		DZA65_RS17545	0.71	+1.3
3,781,712	+		DZA65_RS17545	0.76	-0.1
3,781,713	-		DZA65_RS17545	0.76	+2.5
3,781,821	+		DZA65_RS17545	0.81	-0.1
3,781,821	+		DZA65_RS17545	0.81	+0.7
3,781,822	-		DZA65_RS17545	0.81	-1.0
3,781,822	-		DZA65_RS17545	0.81	-1.1
3,781,984	+		DZA65_RS17545	0.89	+0.8
3,781,984	+		DZA65_RS17545	0.89	-0.0
3,781,984	+		DZA65_RS17545	0.89	+0.3
3,781,984	+		DZA65_RS17545	0.89	-1.8
3,781,984	+		DZA65_RS17545	0.89	-1.3
3,781,984	+		DZA65_RS17545	0.89	-0.4
3,781,985	-		DZA65_RS17545	0.89	+0.5
3,781,985	-		DZA65_RS17545	0.89	+0.8
3,781,985	-		DZA65_RS17545	0.89	-0.5
3,781,985	-		DZA65_RS17545	0.89	+0.1
3,781,985	-		DZA65_RS17545	0.89	-2.2
3,781,988	+		DZA65_RS17545	0.89	+0.6
3,781,988	+		DZA65_RS17545	0.89	-0.8
3,781,988	+		DZA65_RS17545	0.89	-0.0
3,781,989	-		DZA65_RS17545	0.89	+1.3
3,782,059	+				-1.4
3,782,059	+				-1.6
3,782,060	-				-0.5
3,782,060	-				+2.1
3,782,060	-				+1.0
3,782,060	-				-0.4
3,782,060	-				+0.5
3,782,060	-				-1.5
3,782,068	+				+0.7
3,782,069	-				+0.1
3,782,069	-				-0.4
3,782,069	-				-2.1
3,782,069	-				+0.4
3,782,069	-				+0.8
3,782,069	-				-2.5
3,782,069	-				-0.1
3,782,089	+				-0.4
3,782,090	-				+0.8
3,782,216	+				-0.7
3,782,225	+				-0.4
3,782,226	-				-0.5
3,782,232	+				+0.1
3,782,233	-				-0.1
3,782,233	-				-1.4
3,782,241	+				-0.5
3,782,241	+				+0.1
3,782,241	+				-0.7
3,782,241	+				+0.1
3,782,241	+				+0.6
3,782,241	+				+2.5
3,782,241	+				-0.5
3,782,241	+				+0.5
3,782,241	+				+1.3
3,782,241	+				+0.7
3,782,242	-				-0.7
3,782,242	-				-0.2
3,782,242	-				-1.1
3,782,242	-				-0.1
3,782,248	+				+0.5
3,782,248	+				+0.5
3,782,248	+				-0.0
3,782,248	+				-0.5
3,782,248	+				+0.2
3,782,249	-				+0.5
3,782,249	-				+0.1
3,782,249	-				-1.1
3,782,249	-				-0.2
3,782,249	-				-0.2
3,782,256	+				-1.8
3,782,256	+				+1.1
3,782,256	+				+0.1
3,782,256	+				+0.1
3,782,256	+				-0.1
3,782,256	+				+1.1
3,782,257	-				+0.8
3,782,257	-				-0.3
3,782,257	-				+0.1
3,782,267	+				+1.9
3,782,267	+				+0.8
3,782,267	+				+0.7
3,782,267	+				-1.8
3,782,268	-				-1.0
3,782,268	-				+0.2
3,782,336	+				-0.2
3,782,344	+				-3.4
3,782,345	-				+0.6
3,782,366	+				-0.8
3,782,366	+				+0.5
3,782,366	+				+0.5
3,782,367	-				-0.6
3,782,367	-				-0.1
3,782,367	-				-0.4
3,782,367	-				-0.4
3,782,367	-				-0.4
3,782,537	-		DZA65_RS17550	0.18	-1.8
3,782,547	+		DZA65_RS17550	0.20	-1.7
3,782,547	+		DZA65_RS17550	0.20	-1.5
3,782,547	+		DZA65_RS17550	0.20	-0.0
3,782,548	-		DZA65_RS17550	0.20	+1.2
3,782,640	+		DZA65_RS17550	0.32	-0.5
3,782,640	+		DZA65_RS17550	0.32	-2.0
3,782,640	+		DZA65_RS17550	0.32	-2.5
3,782,640	+		DZA65_RS17550	0.32	-0.9
3,782,640	+		DZA65_RS17550	0.32	+0.5
3,782,640	+		DZA65_RS17550	0.32	-0.1
3,782,640	+		DZA65_RS17550	0.32	+0.9
3,782,640	+		DZA65_RS17550	0.32	-1.8
3,782,640	+		DZA65_RS17550	0.32	-1.5
3,782,640	+		DZA65_RS17550	0.32	-0.2
3,782,640	+		DZA65_RS17550	0.32	-0.2
3,782,640	+		DZA65_RS17550	0.32	-0.7
3,782,640	+		DZA65_RS17550	0.32	-0.5
3,782,640	+		DZA65_RS17550	0.32	+0.1
3,782,640	+		DZA65_RS17550	0.32	+0.4
3,782,640	+		DZA65_RS17550	0.32	+0.1
3,782,640	+		DZA65_RS17550	0.32	-0.7
3,782,640	+		DZA65_RS17550	0.32	-0.7
3,782,641	-		DZA65_RS17550	0.33	-1.0
3,782,641	-		DZA65_RS17550	0.33	-1.4
3,782,641	-		DZA65_RS17550	0.33	-0.8
3,782,641	-		DZA65_RS17550	0.33	-1.1
3,782,641	-		DZA65_RS17550	0.33	-1.0
3,782,641	-		DZA65_RS17550	0.33	+0.3
3,782,641	-		DZA65_RS17550	0.33	-0.3
3,782,641	-		DZA65_RS17550	0.33	+3.1
3,782,641	-		DZA65_RS17550	0.33	-2.3
3,782,641	-		DZA65_RS17550	0.33	-0.5
3,782,641	-				-1.5
3,782,641	-		DZA65_RS17550	0.33	-0.1
3,782,641	-		DZA65_RS17550	0.33	-0.7
3,782,641	-		DZA65_RS17550	0.33	+0.0
3,782,641	-		DZA65_RS17550	0.33	+0.3
3,782,641	-		DZA65_RS17550	0.33	-0.6
3,782,641	-		DZA65_RS17550	0.33	-0.3
3,782,641	-		DZA65_RS17550	0.33	-1.1
3,782,641	-		DZA65_RS17550	0.33	-1.2
3,782,642	+		DZA65_RS17550	0.33	+0.2
3,782,642	+		DZA65_RS17550	0.33	-0.3
3,782,642	+		DZA65_RS17550	0.33	-0.8
3,782,642	+		DZA65_RS17550	0.33	+0.1
3,782,642	+		DZA65_RS17550	0.33	+0.5
3,782,642	+		DZA65_RS17550	0.33	-0.6
3,782,643	-		DZA65_RS17550	0.33	+0.7
3,782,643	-		DZA65_RS17550	0.33	-1.0
3,782,694	+		DZA65_RS17550	0.40	+0.4
3,782,694	+		DZA65_RS17550	0.40	+1.4
3,782,694	+		DZA65_RS17550	0.40	-1.1
3,782,695	-		DZA65_RS17550	0.40	-1.5
3,782,695	-		DZA65_RS17550	0.40	-0.4
3,782,724	+		DZA65_RS17550	0.44	-0.1
3,782,724	+		DZA65_RS17550	0.44	+0.9
3,782,724	+		DZA65_RS17550	0.44	-0.3
3,782,724	+		DZA65_RS17550	0.44	-0.2
3,782,724	+		DZA65_RS17550	0.44	-0.9
3,782,725	-		DZA65_RS17550	0.44	+1.1
3,782,725	-		DZA65_RS17550	0.44	-0.6
3,782,725	-		DZA65_RS17550	0.44	-0.3
3,782,725	-		DZA65_RS17550	0.44	-1.4
3,782,725	-		DZA65_RS17550	0.44	-0.8
3,782,725	-		DZA65_RS17550	0.44	-0.9
3,782,725	-		DZA65_RS17550	0.44	-0.1
3,782,838	+		DZA65_RS17550	0.60	+1.2
3,782,839	-		DZA65_RS17550	0.60	-0.3
3,782,839	-		DZA65_RS17550	0.60	+1.5
3,782,874	+		DZA65_RS17550	0.65	+1.2
3,782,875	-		DZA65_RS17550	0.65	+0.7
3,782,891	-		DZA65_RS17550	0.67	-1.8
3,782,904	+		DZA65_RS17550	0.69	-1.8
3,782,904	+		DZA65_RS17550	0.69	-2.0
3,782,904	+		DZA65_RS17550	0.69	+0.8
3,782,904	+		DZA65_RS17550	0.69	-2.1
3,782,904	+		DZA65_RS17550	0.69	-0.3
3,782,905	-		DZA65_RS17550	0.69	+1.0
3,782,905	-		DZA65_RS17550	0.69	+0.7
3,782,905	-		DZA65_RS17550	0.69	-0.0
3,782,905	-		DZA65_RS17550	0.69	+0.8
3,782,905	-		DZA65_RS17550	0.69	-0.5
3,782,911	+		DZA65_RS17550	0.70	+2.5
3,782,911	+		DZA65_RS17550	0.70	-0.2
3,782,911	+		DZA65_RS17550	0.70	+0.9
3,782,911	+		DZA65_RS17550	0.70	+0.2
3,782,911	+		DZA65_RS17550	0.70	+0.5
3,782,911	+		DZA65_RS17550	0.70	-0.1
3,782,912	-		DZA65_RS17550	0.70	-0.4
3,782,912	-		DZA65_RS17550	0.70	+0.8
3,782,912	-		DZA65_RS17550	0.70	+0.4
3,782,914	+		DZA65_RS17550	0.70	-0.3
3,782,914	+		DZA65_RS17550	0.70	+0.2
3,782,914	+		DZA65_RS17550	0.70	-0.3
3,782,914	+		DZA65_RS17550	0.70	-1.8
3,782,914	+		DZA65_RS17550	0.70	-0.9
3,782,915	-		DZA65_RS17550	0.70	+0.9
3,782,915	-		DZA65_RS17550	0.70	+1.8
3,782,915	-		DZA65_RS17550	0.70	-1.5
3,782,915	-		DZA65_RS17550	0.70	+0.2
3,782,915	-		DZA65_RS17550	0.70	-1.5
3,782,968	+		DZA65_RS17550	0.78	-0.8
3,783,080	+				-1.1
3,783,080	+				+0.9
3,783,080	+				-1.5
3,783,080	+				-0.5
3,783,080	+				-0.3
3,783,080	+				-1.3
3,783,080	+				-0.4
3,783,080	+				+1.0
3,783,080	+				-0.7
3,783,080	+				-1.2
3,783,080	+				-0.4
3,783,080	+				-0.4
3,783,080	+				+1.8
3,783,080	+				+3.1
3,783,080	+				+0.5
3,783,081	-				-1.1
3,783,081	-				+0.7
3,783,081	-				-1.1
3,783,081	-				-1.1
3,783,081	-				-0.5
3,783,081	-				-0.1
3,783,081	-				-0.1
3,783,081	-				+0.8
3,783,081	-				+0.3
3,783,081	-				-1.5
3,783,081	-				-2.3
3,783,081	-				+0.7
3,783,081	-				+0.2
3,783,081	-				-0.8
3,783,081	-				+0.8
3,783,081	-				-0.1
3,783,081	-				-0.8
3,783,081	-				+0.3
3,783,081	-				-0.5
3,783,081	-				-0.5
3,783,081	-				-0.8
3,783,081	-				+0.5
3,783,174	-				+0.5
3,783,174	-				-0.8
3,783,207	-				+0.5
3,783,237	+				-0.4
3,783,238	-				+0.3
3,783,284	+				+0.9
3,783,285	-				-0.1
3,783,387	+		DZA65_RS17555	0.16	+0.5
3,783,387	+		DZA65_RS17555	0.16	+0.2
3,783,388	-		DZA65_RS17555	0.16	-0.2
3,783,412	+		DZA65_RS17555	0.17	+0.1
3,783,460	-		DZA65_RS17555	0.20	+1.0
3,783,738	-		DZA65_RS17555	0.36	-1.1
3,783,738	-		DZA65_RS17555	0.36	+1.1
3,783,830	+		DZA65_RS17555	0.42	-0.2
3,783,830	+		DZA65_RS17555	0.42	-1.1
3,783,830	+		DZA65_RS17555	0.42	+0.3
3,783,830	+		DZA65_RS17555	0.42	+0.5
3,783,831	-		DZA65_RS17555	0.42	-0.5
3,783,831	-		DZA65_RS17555	0.42	-2.3
3,783,831	-		DZA65_RS17555	0.42	-0.3
3,783,950	+		DZA65_RS17555	0.49	+0.5
3,783,951	-		DZA65_RS17555	0.49	-0.8
3,783,964	-		DZA65_RS17555	0.50	+0.1
3,784,097	+		DZA65_RS17555	0.58	-0.1
3,784,097	+		DZA65_RS17555	0.58	-0.9
3,784,097	+		DZA65_RS17555	0.58	+0.5
3,784,097	+		DZA65_RS17555	0.58	-0.1
3,784,098	-		DZA65_RS17555	0.58	-0.6
3,784,098	-		DZA65_RS17555	0.58	+0.1
3,784,098	-		DZA65_RS17555	0.58	-0.4
3,784,098	-		DZA65_RS17555	0.58	-0.9
3,784,098	-		DZA65_RS17555	0.58	+0.5
3,784,098	-		DZA65_RS17555	0.58	+0.2
3,784,098	-		DZA65_RS17555	0.58	+0.7
3,784,098	-		DZA65_RS17555	0.58	-0.4
3,784,098	-		DZA65_RS17555	0.58	+0.1
3,784,102	-		DZA65_RS17555	0.58	-0.1
3,784,102	-		DZA65_RS17555	0.58	+1.0
3,784,120	-		DZA65_RS17555	0.59	+0.2
3,784,120	-		DZA65_RS17555	0.59	+0.3