Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14690

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,192,651	-				+0.5
3,192,651	-				-0.4
3,192,651	-				+0.5
3,192,651	-				+0.2
3,192,651	-				-1.6
3,192,651	-				-0.1
3,192,651	-				+0.2
3,192,651	-				-0.2
3,192,651	-				+0.5
3,192,651	-				-0.4
3,192,651	-				-0.4
3,192,651	-				-1.1
3,192,651	-				+1.1
3,192,652	+				+0.7
3,192,661	+				+0.8
3,192,662	-				-0.2
3,192,696	-				-1.8
3,192,696	-				+0.3
3,192,704	+				+0.2
3,192,705	-				-0.6
3,192,705	-				+0.6
3,192,706	+				-2.0
3,192,706	+				+0.3
3,192,706	+				-0.7
3,192,707	-				+0.0
3,192,707	-				+0.8
3,192,707	-				+0.2
3,192,707	-				-1.2
3,192,707	-				+0.0
3,192,707	-				+0.5
3,192,707	-				-0.1
3,192,708	+				+0.7
3,192,708	+				-0.6
3,192,708	+				-1.4
3,192,708	+				+0.0
3,192,708	+				-1.8
3,192,708	+				-0.8
3,192,709	-				+0.9
3,192,709	-				-0.2
3,192,709	-				+0.0
3,192,784	+				+0.7
3,192,784	+				+1.0
3,192,785	-				+0.3
3,192,997	+		DZA65_RS14685	0.31	-1.4
3,192,999	+				+2.9
3,192,999	+		DZA65_RS14685	0.31	+0.1
3,192,999	+		DZA65_RS14685	0.31	+0.1
3,192,999	+		DZA65_RS14685	0.31	+2.2
3,192,999	+		DZA65_RS14685	0.31	-0.3
3,192,999	+		DZA65_RS14685	0.31	-0.2
3,192,999	+		DZA65_RS14685	0.31	+0.2
3,192,999	+		DZA65_RS14685	0.31	-0.2
3,192,999	+		DZA65_RS14685	0.31	-0.4
3,192,999	+		DZA65_RS14685	0.31	-0.1
3,193,000	-		DZA65_RS14685	0.31	-1.5
3,193,000	-		DZA65_RS14685	0.31	-0.2
3,193,000	-		DZA65_RS14685	0.31	-0.9
3,193,000	-		DZA65_RS14685	0.31	+1.2
3,193,000	-		DZA65_RS14685	0.31	-2.8
3,193,000	-		DZA65_RS14685	0.31	-1.1
3,193,000	-		DZA65_RS14685	0.31	-0.9
3,193,000	-		DZA65_RS14685	0.31	-1.5
3,193,003	+		DZA65_RS14685	0.32	+1.0
3,193,003	+		DZA65_RS14685	0.32	-2.9
3,193,003	+		DZA65_RS14685	0.32	-0.5
3,193,004	-		DZA65_RS14685	0.32	+3.0
3,193,004	-		DZA65_RS14685	0.32	-3.1
3,193,029	+		DZA65_RS14685	0.35	-0.3
3,193,029	+		DZA65_RS14685	0.35	+1.7
3,193,029	+		DZA65_RS14685	0.35	+0.3
3,193,029	+		DZA65_RS14685	0.35	-0.0
3,193,029	+		DZA65_RS14685	0.35	+0.2
3,193,029	+		DZA65_RS14685	0.35	+0.6
3,193,029	+		DZA65_RS14685	0.35	+1.2
3,193,029	+		DZA65_RS14685	0.35	-0.4
3,193,029	+		DZA65_RS14685	0.35	-0.3
3,193,030	-		DZA65_RS14685	0.35	+0.7
3,193,030	-		DZA65_RS14685	0.35	-0.4
3,193,030	-		DZA65_RS14685	0.35	-0.5
3,193,030	-		DZA65_RS14685	0.35	-0.4
3,193,030	-		DZA65_RS14685	0.35	+0.3
3,193,030	-		DZA65_RS14685	0.35	-0.2
3,193,030	-		DZA65_RS14685	0.35	-0.6
3,193,030	-		DZA65_RS14685	0.35	+0.1
3,193,030	-		DZA65_RS14685	0.35	-0.6
3,193,030	-		DZA65_RS14685	0.35	-0.5
3,193,030	-		DZA65_RS14685	0.35	-1.1
3,193,033	+		DZA65_RS14685	0.36	-0.2
3,193,033	+		DZA65_RS14685	0.36	+0.5
3,193,033	+		DZA65_RS14685	0.36	+1.0
3,193,033	+		DZA65_RS14685	0.36	-0.4
3,193,033	+		DZA65_RS14685	0.36	-0.0
3,193,033	+		DZA65_RS14685	0.36	+0.5
3,193,033	+		DZA65_RS14685	0.36	-0.5
3,193,033	+		DZA65_RS14685	0.36	-0.8
3,193,034	-		DZA65_RS14685	0.36	-1.2
3,193,034	-		DZA65_RS14685	0.36	+0.5
3,193,034	-		DZA65_RS14685	0.36	-1.0
3,193,034	-		DZA65_RS14685	0.36	-0.3
3,193,034	-		DZA65_RS14685	0.36	-0.4
3,193,034	-		DZA65_RS14685	0.36	-0.1
3,193,034	-		DZA65_RS14685	0.36	+0.5
3,193,034	-		DZA65_RS14685	0.36	-0.5
3,193,034	-		DZA65_RS14685	0.36	-0.0
3,193,034	-		DZA65_RS14685	0.36	+0.6
3,193,111	+		DZA65_RS14685	0.47	+2.2
3,193,111	+		DZA65_RS14685	0.47	-0.7
3,193,111	+		DZA65_RS14685	0.47	+0.5
3,193,112	-		DZA65_RS14685	0.47	+0.7
3,193,112	-		DZA65_RS14685	0.47	-1.1
3,193,112	-		DZA65_RS14685	0.47	-0.1
3,193,112	-		DZA65_RS14685	0.47	+0.8
3,193,112	-		DZA65_RS14685	0.47	-0.0
3,193,114	+		DZA65_RS14685	0.47	+2.0
3,193,114	+		DZA65_RS14685	0.47	-0.5
3,193,115	-		DZA65_RS14685	0.47	-0.5
3,193,115	-		DZA65_RS14685	0.47	-0.5
3,193,115	-		DZA65_RS14685	0.47	+0.2
3,193,226	-		DZA65_RS14685	0.62	+0.3
3,193,297	+		DZA65_RS14685	0.72	+0.7
3,193,300	+		DZA65_RS14685	0.73	-1.4
3,193,301	-		DZA65_RS14685	0.73	-0.4
3,193,301	-		DZA65_RS14685	0.73	+2.3
3,193,301	-		DZA65_RS14685	0.73	-0.2
3,193,301	-		DZA65_RS14685	0.73	-0.4
3,193,301	-		DZA65_RS14685	0.73	+0.2
3,193,301	-		DZA65_RS14685	0.73	+0.2
3,193,303	+		DZA65_RS14685	0.73	-0.1
3,193,303	+		DZA65_RS14685	0.73	+1.1
3,193,304	-		DZA65_RS14685	0.73	-0.8
3,193,304	-		DZA65_RS14685	0.73	+1.7
3,193,304	-		DZA65_RS14685	0.73	+0.0
3,193,321	+		DZA65_RS14685	0.75	+0.3
3,193,352	+		DZA65_RS14685	0.80	-0.6
3,193,352	+		DZA65_RS14685	0.80	-0.9
3,193,399	+		DZA65_RS14685	0.86	-0.4
3,193,399	+		DZA65_RS14685	0.86	+0.4
3,193,399	+		DZA65_RS14685	0.86	-0.2
3,193,400	-		DZA65_RS14685	0.86	-0.2
3,193,430	+				-2.1
3,193,430	+				-0.8
3,193,430	+				-1.1
3,193,430	+				-0.9
3,193,431	-				+0.4
3,193,431	-				+0.2
3,193,431	-				-1.4
3,193,431	-				-0.2
3,193,431	-				+0.6
3,193,431	-				+1.2
3,193,431	-				-0.0
3,193,431	-				+0.1
3,193,527	+				-2.4
3,193,527	+				-0.1
3,193,527	+				-0.4
3,193,528	-				+1.3
3,193,528	-				-0.1
3,193,528	-				-0.8
3,193,528	-				-0.1
3,193,528	-				+0.6
3,193,538	+				+0.9
3,193,616	+				+1.2
3,193,616	+				+0.5
3,193,616	+				-0.5
3,193,616	+				-1.1
3,193,616	+				-0.7
3,193,616	+				-0.9
3,193,616	+				+0.4
3,193,616	+				+0.6
3,193,617	-				+0.0
3,193,617	-				+1.5
3,193,617	-				+0.1
3,193,617	-				+0.4
3,193,617	-				-0.8
3,193,617	-				+0.2
3,193,617	-				+0.5
3,193,617	-				+0.4
3,193,732	+		DZA65_RS14690	0.14	-0.5
3,193,732	+		DZA65_RS14690	0.14	-0.0
3,193,733	-		DZA65_RS14690	0.15	-0.3
3,193,733	-		DZA65_RS14690	0.15	+1.0
3,193,742	+		DZA65_RS14690	0.16	+0.4
3,193,742	+		DZA65_RS14690	0.16	-0.9
3,193,742	+		DZA65_RS14690	0.16	+1.6
3,193,742	+		DZA65_RS14690	0.16	+0.0
3,193,742	+		DZA65_RS14690	0.16	-0.4
3,193,743	-		DZA65_RS14690	0.16	-1.1
3,193,743	-		DZA65_RS14690	0.16	-1.6
3,193,743	-		DZA65_RS14690	0.16	+0.2
3,193,743	-		DZA65_RS14690	0.16	+1.0
3,193,743	-		DZA65_RS14690	0.16	+0.6
3,193,743	-		DZA65_RS14690	0.16	-0.5
3,193,743	-		DZA65_RS14690	0.16	+1.1
3,193,743	-		DZA65_RS14690	0.16	-0.9
3,193,743	-		DZA65_RS14690	0.16	+2.3
3,193,743	-		DZA65_RS14690	0.16	+1.0
3,193,743	-		DZA65_RS14690	0.16	-0.2
3,193,746	+		DZA65_RS14690	0.17	-1.8
3,193,746	+		DZA65_RS14690	0.17	-0.1
3,193,746	+		DZA65_RS14690	0.17	+0.2
3,193,746	+		DZA65_RS14690	0.17	-1.7
3,193,746	+		DZA65_RS14690	0.17	-0.8
3,193,747	-		DZA65_RS14690	0.17	+2.5
3,193,747	-		DZA65_RS14690	0.17	+0.9
3,193,747	-		DZA65_RS14690	0.17	-1.9
3,193,747	-		DZA65_RS14690	0.17	+0.0
3,193,747	-		DZA65_RS14690	0.17	-0.2
3,193,747	-		DZA65_RS14690	0.17	-0.2
3,193,747	-		DZA65_RS14690	0.17	+0.2
3,193,748	+		DZA65_RS14690	0.17	+0.4
3,193,748	+		DZA65_RS14690	0.17	-0.4
3,193,749	-		DZA65_RS14690	0.17	+0.2
3,193,775	+		DZA65_RS14690	0.22	+1.2
3,193,793	-		DZA65_RS14690	0.25	-1.4
3,193,793	-		DZA65_RS14690	0.25	+0.5
3,193,793	-		DZA65_RS14690	0.25	+0.1
3,193,866	+		DZA65_RS14690	0.38	+1.2
3,193,866	+		DZA65_RS14690	0.38	-0.2
3,193,866	+		DZA65_RS14690	0.38	+0.9
3,193,866	+		DZA65_RS14690	0.38	-0.4
3,193,867	-		DZA65_RS14690	0.39	+1.2
3,193,867	-		DZA65_RS14690	0.39	-0.7
3,193,900	+		DZA65_RS14690	0.44	+0.3
3,193,900	+		DZA65_RS14690	0.44	-2.1
3,193,900	+				+0.2
3,193,900	+		DZA65_RS14690	0.44	-1.4
3,193,900	+		DZA65_RS14690	0.44	-0.0
3,193,901	-		DZA65_RS14690	0.45	+0.2
3,193,901	-		DZA65_RS14690	0.45	-1.8
3,193,901	-		DZA65_RS14690	0.45	+0.2
3,193,901	-		DZA65_RS14690	0.45	+0.4
3,193,901	-		DZA65_RS14690	0.45	-0.3
3,193,903	+		DZA65_RS14690	0.45	-1.9
3,193,903	+		DZA65_RS14690	0.45	-0.2
3,193,903	+		DZA65_RS14690	0.45	+1.0
3,193,903	+		DZA65_RS14690	0.45	+1.1
3,193,903	+		DZA65_RS14690	0.45	-1.9
3,193,904	-		DZA65_RS14690	0.45	+0.5
3,193,907	+		DZA65_RS14690	0.46	+1.2
3,193,907	+		DZA65_RS14690	0.46	+1.0
3,193,908	-		DZA65_RS14690	0.46	+0.6
3,193,992	+		DZA65_RS14690	0.61	+1.0
3,193,993	-		DZA65_RS14690	0.61	-1.0
3,193,993	-		DZA65_RS14690	0.61	-0.6
3,193,993	-		DZA65_RS14690	0.61	-2.4
3,193,993	-		DZA65_RS14690	0.61	-0.3
3,194,037	-		DZA65_RS14690	0.69	+0.1
3,194,237	+				+0.1
3,194,238	-				-0.8
3,194,269	+				+0.2
3,194,269	+				-0.1
3,194,269	+				+0.5
3,194,269	+				-0.2
3,194,269	+				-0.7
3,194,270	-				+0.5
3,194,270	-				-0.0
3,194,272	+				+0.2
3,194,272	+				-0.2
3,194,272	+				-1.7
3,194,273	-				+0.2
3,194,273	-				+1.0
3,194,298	+				+0.4
3,194,298	+				-2.1
3,194,299	-				-0.4
3,194,299	-				-0.6
3,194,299	-				+1.2
3,194,306	+				-0.8
3,194,306	+				-0.4
3,194,307	-				+0.5
3,194,321	+				+0.5
3,194,321	+				-0.7
3,194,358	+				-0.4
3,194,358	+				+0.2
3,194,359	-				-1.0
3,194,370	+				+0.1
3,194,458	+				-0.8
3,194,530	-				+2.1
3,194,538	+				+0.3
3,194,539	-				-0.3
3,194,540	+				-1.0
3,194,540	+				-0.4
3,194,540	+				+0.5
3,194,540	+				+0.1
3,194,540	+				-0.8
3,194,540	+				+0.9
3,194,540	+				-1.4
3,194,540	+				-0.1
3,194,540	+				-0.0
3,194,540	+				+0.8
3,194,540	+				-0.8
3,194,541	-				-0.1
3,194,541	-				-1.1
3,194,541	-				-0.5
3,194,541	-				-0.6
3,194,541	-				-0.1
3,194,541	-				+0.5
3,194,541	-				-0.6
3,194,541	-				+0.9
3,194,541	-				-0.2
3,194,541	-				+0.4
3,194,541	-				+1.4
3,194,542	+				-1.1
3,194,542	+				+1.4
3,194,542	+				-0.1
3,194,542	+				-3.2
3,194,542	+				+0.4
3,194,542	+				+0.2
3,194,542	+				+0.7
3,194,543	-				-0.4
3,194,543	-				-0.7
3,194,543	-				-0.0
3,194,543	-				+0.8
3,194,543	-				-1.8
3,194,543	-				-1.4
3,194,543	-				-1.1
3,194,543	-				-1.4
3,194,543	-				-1.4
3,194,544	+				+0.8
3,194,544	+				+0.2
3,194,544	+				+0.5
3,194,545	-				+1.4
3,194,545	-				+1.1
3,194,545	-				+0.5
3,194,546	+				+0.6
3,194,546	+				+0.2
3,194,546	+				-0.3
3,194,546	+				-0.4
3,194,547	-				+1.9
3,194,547	-				+0.3
3,194,547	-				-0.4
3,194,547	-				+0.7
3,194,547	-				-0.8
3,194,552	+				+0.9
3,194,552	+				+0.2
3,194,552	+				+1.1
3,194,577	+				-0.1
3,194,577	+				-0.3
3,194,605	+				+0.3
3,194,606	-				+0.4
3,194,606	-				-1.1
3,194,606	-				+1.2
3,194,606	-				-1.6
3,194,614	-				+2.2
3,194,627	+				-0.3
3,194,628	-				-0.6
3,194,628	-				-0.8
3,194,630	-				-1.4
3,194,641	+				+0.8
3,194,641	+				-2.8
3,194,641	+				+0.2
3,194,641	+				+0.8
3,194,642	-				+0.4
3,194,642	-				-0.8
3,194,642	-				+1.5
3,194,642	-				+0.5
3,194,661	+				-0.4
3,194,662	-				+0.2
3,194,662	-				+0.3
3,194,664	+				-0.9
3,194,664	+				-1.3
3,194,667	+				-0.2
3,194,668	-				-0.1
3,194,668	-				-0.8
3,194,704	+				-1.5
3,194,784	-				-1.4
3,194,803	-				-0.2
3,194,815	-				+0.4
3,194,847	+				-2.0
3,194,914	+				+0.2
3,194,914	+				+0.1
3,194,915	-				+0.0
3,194,915	-				+0.6
3,194,915	-				-1.0
3,194,931	-				+1.0
3,194,965	+				-0.8
3,194,965	+				-0.1
3,194,973	+				+2.0
3,194,973	+				-0.7
3,194,974	-				-0.2
3,194,977	-				+0.0
3,195,016	-		DZA65_RS14695	0.11	-0.6
3,195,021	+		DZA65_RS14695	0.12	-1.4
3,195,046	+		DZA65_RS14695	0.14	-0.8
3,195,047	-		DZA65_RS14695	0.14	+0.6
3,195,047	-		DZA65_RS14695	0.14	+0.2
3,195,097	-		DZA65_RS14695	0.18	+0.4
3,195,108	+		DZA65_RS14695	0.18	+0.2
3,195,202	-		DZA65_RS14695	0.26	+2.0